Os05g0251900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Oligopeptide transporter OPT superfamily protein.
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Os05g0251900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Oligopeptide transporter OPT superfamily protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 270.7 | 0.773 | 2.98 | 0.0497 | 0.0835 | -3.73 | 0.556 | -5.01 | 0.206 | 2.76 | 9.159 | 19 | -- | -- |
| 271.99 | 0.768 | 2.96 | 0.0418 | 0.0707 | -2.45 | 0.469 | -- | 0.238 | 3.26 | 9.102 | 18 | -- | -- |
| 271.3 | 0.767 | 2.98 | 0.0517 | 0.117 | -3.93 | -- | -5.1 | 0.21 | 0.293 | 9.2 | 18 | -- | -- |
| 272.15 | 0.768 | 2.97 | 0.0205 | 0.117 | -2.5 | -- | -- | 0.196 | 23.7 | 9.161 | 18 | -- | -- |
| 272.15 | 0.768 | 2.98 | 0.0391 | -- | -3.56 | -- | -4.21 | 0.206 | -- | 9.119 | 18 | -- | -- |
| 283.47 | 0.789 | 2.97 | -0.113 | 0.0356 | -- | -0.971 | -- | 0.162 | 16.5 | -- | -- | -- | -- |
| 285.64 | 0.791 | 2.98 | -0.121 | 0.0841 | -- | -- | -- | 0.157 | 20.9 | -- | -- | -- | -- |
| 272.06 | 0.768 | 2.97 | -0.00273 | -- | -2.64 | -- | -- | 0.196 | -- | 8.9 | 18 | -- | -- |
| 272.15 | 0.768 | 2.97 | -- | 0.121 | -2.48 | -- | -- | 0.205 | 23.5 | 9.142 | 18 | -- | -- |
| 286.05 | 0.79 | 2.98 | -0.121 | -- | -- | -- | -- | 0.156 | -- | -- | -- | -- | -- |
| 286.02 | 0.791 | 2.98 | -- | 0.0844 | -- | -- | -- | 0.17 | 20.8 | -- | -- | -- | -- |
| 271.99 | 0.768 | 2.97 | -- | -- | -2.49 | -- | -- | 0.207 | -- | 8.892 | 18 | -- | -- |
| 286.43 | 0.79 | 2.97 | -- | -- | -- | -- | -- | 0.17 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 258.45 | wind | 9.0 | 30 | > th | dose dependent | rect. | 1 | 11 |
| 9 | 258.72 | wind | 9.0 | 30 | > th | dose dependent | rect. | 11 | 1 |
| 35 | 259.84 | wind | 9.0 | 30 | > th | dose dependent | sin | 7 | NA |
| 40 | 260.60 | wind | 9.0 | 30 | > th | dose independent | rect. | 11 | 1 |
| 42 | 261.02 | wind | 9.0 | 30 | > th | dose independent | rect. | 1 | 11 |
| 50 | 261.11 | wind | 9.0 | 30 | < th | dose independent | sin | 6 | NA |
| 142 | 262.85 | wind | 9.0 | 30 | > th | dose independent | sin | 6 | NA |
| 145 | 262.93 | radiation | 1.0 | 90 | < th | dose independent | rect. | 14 | 1 |
| 146 | 262.93 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 14 | 1 |
| 209 | 266.15 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 5 | 1 |
| 216 | 266.15 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 5 | 1 |
| 271 | 267.25 | atmosphere | 1005.0 | 30 | < th | dose independent | rect. | 15 | 2 |
| 289 | 268.54 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 1 | 2 |
| 298 | 269.28 | radiation | 10.0 | 10 | < th | dose independent | rect. | 12 | 1 |
| 319 | 269.97 | humidity | 70.0 | 30 | > th | dose independent | rect. | 15 | 2 |
| 341 | 270.22 | humidity | 90.0 | 10 | < th | dose independent | rect. | 1 | 4 |
| 371 | 270.76 | radiation | 20.0 | 90 | < th | dose independent | rect. | 14 | 1 |
| 375 | 270.83 | temperature | 20.0 | 270 | < th | dose independent | rect. | 24 | 1 |
| 385 | 270.92 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 14 | 1 |
| 407 | 270.97 | wind | 9.0 | 90 | < th | dose independent | rect. | 16 | 23 |
| 481 | 271.58 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 4 | 1 |
| 545 | 271.98 | atmosphere | 1010.0 | 30 | < th | dose dependent | rect. | 15 | 2 |
| 613 | 272.57 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 8 | 8 |
| 637 | 272.75 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 15 | 1 |
| 638 | 272.76 | temperature | 30.0 | 90 | < th | dose independent | rect. | 15 | 1 |
| 667 | 273.12 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 2 | 3 |
| 708 | 273.43 | humidity | 50.0 | 90 | > th | dose independent | rect. | 15 | 1 |
| 715 | 273.48 | radiation | 1.0 | 270 | < th | dose independent | rect. | 9 | 6 |
| 727 | 273.50 | temperature | 20.0 | 90 | > th | dose independent | rect. | 15 | 1 |
| 731 | 273.52 | wind | 7.0 | 30 | < th | dose independent | rect. | 7 | 8 |
| 763 | 273.54 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 2 | 1 |
| 777 | 273.62 | wind | 9.0 | 90 | < th | dose independent | rect. | 15 | 1 |
| 790 | 273.70 | radiation | 20.0 | 90 | < th | dose independent | rect. | 14 | 3 |
| 810 | 273.79 | wind | 3.0 | 10 | > th | dose independent | rect. | 15 | 2 |
| 817 | 273.81 | humidity | 80.0 | 90 | < th | dose independent | rect. | 2 | 2 |
| 818 | 273.82 | humidity | 80.0 | 90 | < th | dose dependent | rect. | 2 | 2 |
| 831 | 273.89 | humidity | 90.0 | 90 | < th | dose independent | rect. | 15 | 1 |
| 851 | 273.99 | wind | 7.0 | 10 | > th | dose dependent | rect. | 16 | 1 |
| 852 | 274.00 | wind | 9.0 | 30 | > th | dose independent | rect. | 11 | 15 |
| 932 | 274.18 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 15 | 1 |
| 970 | 274.26 | wind | 1.0 | 90 | > th | dose independent | rect. | 15 | 1 |
| 984 | 274.29 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 16 | 23 |
| 986 | 274.31 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 15 | 1 |
| 988 | 274.31 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 15 | 1 |
| 990 | 274.32 | wind | 9.0 | 30 | < th | dose independent | no | NA | NA |
| 991 | 274.33 | temperature | 10.0 | 90 | > th | dose independent | rect. | 15 | 1 |
| 996 | 274.33 | temperature | 10.0 | 90 | > th | dose independent | rect. | 16 | 23 |