Os02g0633300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Iron-phytosiderophore transporter protein yellow stripe 1.
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Os02g0633300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Iron-phytosiderophore transporter protein yellow stripe 1.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 89.22 | 0.444 | 11.2 | 1.16 | 1.57 | 1.11 | 0.339 | 1.18 | 0.206 | 16.7 | 53.57 | 1229 | -- | -- |
| 91.17 | 0.445 | 11.2 | 1.29 | 1.57 | 1.21 | 0.495 | -- | 0.222 | 16.8 | 52 | 1206 | -- | -- |
| 89.43 | 0.44 | 11.2 | 1.14 | 1.56 | 1.1 | -- | 1.27 | 0.215 | 16.6 | 55.29 | 1263 | -- | -- |
| 91.79 | 0.446 | 11.2 | 1.29 | 1.56 | 1.2 | -- | -- | 0.226 | 16.7 | 51.78 | 1215 | -- | -- |
| 215.42 | 0.684 | 11.1 | 1.11 | -- | 1.61 | -- | 1.16 | 0.213 | -- | 58 | 1230 | -- | -- |
| 120.78 | 0.515 | 11.2 | 1.23 | 1.72 | -- | 0.484 | -- | 0.177 | 16.3 | -- | -- | -- | -- |
| 121.43 | 0.516 | 11.2 | 1.23 | 1.73 | -- | -- | -- | 0.179 | 16.3 | -- | -- | -- | -- |
| 217.21 | 0.686 | 11.1 | 1.26 | -- | 1.67 | -- | -- | 0.211 | -- | 52.74 | 1223 | -- | -- |
| 134.51 | 0.54 | 11.2 | -- | 1.6 | 1.26 | -- | -- | 0.231 | 16.6 | 63.55 | 2644 | -- | -- |
| 282.06 | 0.785 | 11.2 | 1.16 | -- | -- | -- | -- | 0.133 | -- | -- | -- | -- | -- |
| 161.54 | 0.595 | 11.2 | -- | 1.7 | -- | -- | -- | 0.0419 | 16.3 | -- | -- | -- | -- |
| 257.55 | 0.747 | 11.2 | -- | -- | 1.68 | -- | -- | 0.111 | -- | 61.22 | 1232 | -- | -- |
| 317.84 | 0.832 | 11.2 | -- | -- | -- | -- | -- | 0.0042 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 81.28 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 20 | 3 |
| 7 | 83.20 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 19 | 6 |
| 28 | 86.66 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 7 | 17 |
| 38 | 88.09 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 18 | 3 |
| 41 | 88.28 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 18 | 18 |
| 49 | 88.58 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 19 | 13 |
| 66 | 89.38 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 18 | 18 |
| 68 | 89.50 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 7 | 5 |
| 71 | 89.61 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 17 | 18 |
| 72 | 89.61 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 17 | 18 |
| 82 | 89.97 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 6 | 6 |
| 87 | 90.01 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 7 | 5 |
| 95 | 90.17 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 7 | 5 |
| 107 | 90.32 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 6 | 18 |
| 115 | 90.42 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 16 | 20 |
| 116 | 90.44 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 6 | 9 |
| 119 | 90.46 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 16 | 20 |
| 131 | 90.55 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 15 | 21 |
| 139 | 90.62 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 18 | 14 |
| 144 | 90.65 | wind | 3.0 | 10 | < th | dose dependent | rect. | 2 | 4 |
| 149 | 90.69 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 19 | 2 |
| 161 | 90.80 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 7 | 7 |
| 162 | 90.80 | humidity | 90.0 | 720 | > th | dose independent | rect. | 6 | 18 |
| 167 | 90.82 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 13 |
| 168 | 90.83 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 18 | 3 |
| 193 | 90.90 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 7 | 15 |
| 203 | 90.93 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 213 | 90.97 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 6 | 20 |
| 231 | 91.04 | humidity | 70.0 | 1440 | > th | dose independent | sin | 9 | NA |
| 232 | 91.04 | humidity | 80.0 | 720 | < th | dose independent | rect. | 17 | 4 |
| 251 | 91.10 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 7 | 5 |
| 257 | 91.12 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 2 | 4 |
| 258 | 91.12 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 2 | 4 |
| 264 | 91.14 | humidity | 80.0 | 720 | > th | dose independent | rect. | 20 | 3 |
| 268 | 91.15 | humidity | 70.0 | 720 | > th | dose independent | rect. | 19 | 6 |
| 307 | 91.25 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 17 | 4 |
| 344 | 91.35 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 9 | 2 |
| 353 | 91.37 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 15 | 21 |
| 365 | 91.41 | wind | 3.0 | 90 | < th | dose dependent | rect. | 2 | 3 |
| 409 | 91.53 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 19 | 1 |
| 415 | 91.55 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 7 | 15 |
| 454 | 91.61 | humidity | 70.0 | 720 | > th | dose independent | rect. | 19 | 14 |
| 469 | 91.67 | humidity | 50.0 | 1440 | > th | dose dependent | no | NA | NA |
| 475 | 91.69 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 23 | 22 |
| 479 | 91.69 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 23 | 22 |
| 480 | 91.70 | humidity | 90.0 | 720 | < th | dose independent | rect. | 18 | 2 |
| 524 | 91.81 | humidity | 70.0 | 1440 | < th | dose independent | sin | 10 | NA |
| 541 | 91.85 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 8 | 21 |
| 542 | 91.85 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 8 | 21 |
| 549 | 91.89 | humidity | 60.0 | 1440 | > th | dose dependent | sin | 2 | NA |
| 559 | 91.91 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 18 | 5 |
| 584 | 91.97 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 8 | 12 |
| 619 | 92.02 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 24 | 4 |
| 623 | 92.04 | humidity | 90.0 | 720 | > th | dose dependent | sin | 21 | NA |
| 648 | 92.10 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 1 | 19 |
| 652 | 92.10 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 1 | 19 |
| 677 | 92.13 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 22 | 22 |
| 689 | 92.14 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 24 | 20 |
| 693 | 92.14 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 2 | 23 |
| 700 | 92.15 | humidity | 70.0 | 1440 | > th | dose independent | no | NA | NA |
| 701 | 92.15 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 3 | 3 |
| 703 | 92.15 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 2 | 18 |
| 727 | 92.16 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 6 | 18 |
| 854 | 92.40 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 2 | 4 |
| 896 | 92.49 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 15 | 14 |
| 900 | 92.49 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 15 | 14 |
| 907 | 92.51 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 10 | 1 |
| 977 | 92.67 | wind | 3.0 | 43200 | < th | dose independent | rect. | 2 | 2 |