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Os04g0542800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Iron-phytosiderophore transporter protein yellow stripe 1.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.5 (0.0248) R2 : 0.709
β1 : -- (--) R2dD : -- R2D : --
β2 : 3.25 (0.0992) R2dC : 1.81 R2C : -0.126
β3 : 2.37 (0.106) R2dE : 0.835 R2E : -1.1
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.024 (0.0523) R2dN8 : 0.000155 R2N8 : -0.000555
σ : 0.467
deviance : 100.36
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_____
C
peak time of C : 14.6
E
wheather : temperature
threshold : -0.9678
memory length : 265
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 18.8
open length of G : 7.29

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
101.07 0.472 13.5 -0.17 3.05 2.3 -0.196 -0.723 -0.0413 14.7 7.919 252 19.1 7.05
100.81 0.468 13.5 -0.162 3.14 2.37 0.216 -- -0.0369 14.7 5.666 251 19.1 7.1
100.87 0.468 13.5 -0.161 3.06 2.3 -- -0.421 -0.036 14.7 7.2 247 19.1 7.05
100.14 0.466 13.5 -0.119 3.33 2.46 -- -- 0.0169 14.6 0.151 264 18.8 7.38
196.94 0.654 13.4 0.453 -- -2.44 -- 3.13 0.505 -- 21.8 524 23 2.9
161.55 0.596 13.5 -0.0905 1.85 -- 0.383 -- -0.00831 16.6 -- -- -- --
161.93 0.596 13.5 -0.0881 1.85 -- -- -- -0.0063 16.6 -- -- -- --
130.58 0.532 13.5 0.0478 -- -1.93 -- -- 0.171 -- -3.197 323 22.9 7.97
100.36 0.467 13.5 -- 3.25 2.37 -- -- 0.024 14.6 -0.9678 265 18.8 7.29
344.63 0.867 13.5 -0.159 -- -- -- -- -0.0549 -- -- -- -- --
162.14 0.596 13.5 -- 1.85 -- -- -- 0.00351 16.6 -- -- -- --
126.84 0.525 13.5 -- -- -2.09 -- -- 0.0937 -- -4.814 361 23.2 6.83
345.3 0.867 13.5 -- -- -- -- -- -0.0372 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 102.53 temperature 10.0 270 > th dose dependent rect. 19 7
2 104.15 radiation 30.0 10 < th dose dependent rect. 4 16
3 105.07 radiation 30.0 10 < th dose dependent rect. 4 18
6 105.51 temperature 15.0 270 > th dose independent rect. 19 7
8 105.62 precipitation 0.1 270 < th dose independent rect. 2 17
9 105.62 precipitation 0.1 270 < th dose dependent rect. 2 17
11 105.94 radiation 1.0 270 > th dose independent rect. 6 9
12 105.95 temperature 15.0 270 > th dose independent rect. 6 8
15 106.19 radiation 40.0 90 < th dose dependent rect. 15 18
17 106.53 wind 9.0 270 < th dose independent rect. 15 15
18 106.55 precipitation 0.1 270 < th dose independent rect. 6 9
19 106.55 precipitation 0.1 270 < th dose dependent rect. 6 9
22 106.62 wind 5.0 270 < th dose independent rect. 1 6
24 106.67 humidity 60.0 270 > th dose independent rect. 19 7
25 106.67 radiation 40.0 270 < th dose independent rect. 14 16
27 106.71 temperature 30.0 270 < th dose independent rect. 19 7
29 106.71 atmosphere 995.0 270 > th dose independent rect. 19 7
30 106.71 radiation 1.0 270 < th dose independent rect. 19 7
35 106.71 temperature 10.0 270 > th dose independent rect. 2 17
36 106.71 atmosphere 1015.0 270 < th dose independent rect. 2 17
37 106.71 radiation 1.0 270 < th dose dependent rect. 19 7
43 106.83 precipitation 0.1 270 < th dose independent rect. 19 7
44 106.83 precipitation 0.1 270 < th dose dependent rect. 19 7
46 107.02 wind 9.0 270 < th dose independent rect. 2 17
49 107.06 atmosphere 1015.0 270 < th dose independent rect. 6 9
50 107.06 temperature 10.0 270 > th dose independent rect. 15 15
51 107.13 wind 9.0 270 < th dose independent rect. 19 7
53 107.18 temperature 15.0 270 > th dose independent rect. 7 18
54 107.18 radiation 10.0 10 < th dose independent rect. 4 18
58 107.28 radiation 10.0 10 < th dose independent rect. 4 16
60 107.40 wind 9.0 270 < th dose independent rect. 6 9
61 107.51 precipitation 0.1 270 < th dose independent rect. 15 15
62 107.51 precipitation 0.1 270 < th dose dependent rect. 15 15
66 107.60 atmosphere 995.0 270 > th dose independent rect. 6 8
69 107.63 radiation 40.0 270 < th dose dependent rect. 1 8
74 107.80 radiation 10.0 270 < th dose independent rect. 1 7
83 108.08 radiation 10.0 270 < th dose independent rect. 2 5
85 108.14 humidity 50.0 270 > th dose independent rect. 6 8
91 108.26 radiation 20.0 90 < th dose independent rect. 15 18
97 108.39 atmosphere 1015.0 270 < th dose independent rect. 19 7
108 108.68 atmosphere 995.0 270 > th dose dependent rect. 1 6
121 108.88 wind 1.0 270 > th dose independent rect. 19 7
128 109.05 atmosphere 995.0 270 > th dose dependent rect. 2 4
136 109.21 radiation 40.0 10 < th dose dependent rect. 14 19
138 109.42 wind 5.0 270 < th dose independent rect. 2 4
142 109.50 precipitation 0.1 270 < th dose independent rect. 1 6
143 109.50 precipitation 0.1 270 < th dose dependent rect. 1 6
144 109.51 temperature 15.0 270 > th dose independent rect. 20 17
147 109.62 humidity 70.0 270 > th dose independent rect. 1 6
154 109.78 radiation 1.0 270 > th dose independent rect. 4 10
172 109.89 wind 9.0 270 < th dose dependent rect. 1 6
173 109.92 temperature 10.0 270 > th dose dependent rect. 1 6
181 110.11 temperature 10.0 270 > th dose independent rect. 1 6
183 110.11 temperature 30.0 270 < th dose independent rect. 1 6
184 110.11 humidity 50.0 270 > th dose independent rect. 1 6
186 110.11 atmosphere 995.0 270 > th dose independent rect. 1 6
187 110.11 atmosphere 1015.0 270 < th dose independent rect. 1 6
205 110.45 atmosphere 995.0 270 > th dose independent rect. 2 17
215 110.66 humidity 50.0 270 > th dose dependent rect. 1 7
216 110.70 radiation 1.0 270 < th dose independent rect. 2 15
219 110.75 radiation 10.0 270 < th dose dependent rect. 2 16
248 111.05 wind 9.0 270 < th dose independent rect. 7 18
253 111.17 precipitation 0.1 270 < th dose independent rect. 7 18
254 111.17 precipitation 0.1 270 < th dose dependent rect. 7 18
261 111.30 atmosphere 1015.0 270 < th dose independent rect. 7 18
262 111.30 atmosphere 995.0 270 > th dose dependent rect. 3 2
270 111.36 precipitation 0.1 270 < th dose independent rect. 2 4
271 111.36 precipitation 0.1 270 < th dose dependent rect. 2 4
291 111.59 temperature 10.0 10 > th dose dependent rect. 20 8
294 111.60 radiation 10.0 270 < th dose dependent rect. 2 11
298 111.64 wind 5.0 270 < th dose independent rect. 3 2
323 111.95 radiation 20.0 10 < th dose independent rect. 4 5
333 112.06 temperature 10.0 270 > th dose independent rect. 2 4
335 112.06 temperature 30.0 270 < th dose independent rect. 2 4
336 112.06 humidity 50.0 270 > th dose independent rect. 2 4
339 112.06 atmosphere 995.0 270 > th dose independent rect. 2 4
340 112.06 atmosphere 1015.0 270 < th dose independent rect. 2 4
348 112.07 humidity 50.0 270 > th dose independent rect. 20 17
369 112.23 atmosphere 995.0 270 > th dose independent rect. 14 16
377 112.36 wind 1.0 270 > th dose independent rect. 1 6
398 112.43 wind 9.0 270 < th dose independent rect. 13 7
429 112.58 precipitation 0.1 270 < th dose independent rect. 3 2
431 112.58 precipitation 0.1 270 < th dose dependent rect. 3 2
459 112.70 temperature 15.0 10 > th dose independent rect. 20 8
465 112.76 precipitation 0.1 270 < th dose independent rect. 13 7
467 112.76 precipitation 0.1 270 < th dose dependent rect. 13 7
478 112.84 wind 1.0 270 > th dose independent rect. 7 18
486 112.89 temperature 10.0 270 > th dose independent rect. 13 7
487 112.89 atmosphere 1015.0 270 < th dose independent rect. 13 7
491 112.89 atmosphere 995.0 270 > th dose independent rect. 20 17
492 112.89 radiation 40.0 10 < th dose dependent rect. 4 5
500 112.96 wind 1.0 270 > th dose independent rect. 6 8
506 112.99 atmosphere 1015.0 270 < th dose independent rect. 20 17
516 113.10 precipitation 0.1 270 < th dose independent rect. 20 17
517 113.10 precipitation 0.1 270 < th dose dependent rect. 20 17
520 113.14 radiation 1.0 270 < th dose independent rect. 3 2
523 113.15 humidity 50.0 270 > th dose independent rect. 6 20
525 113.16 wind 9.0 270 < th dose independent rect. 20 17
526 113.16 humidity 50.0 270 > th dose independent rect. 7 18
528 113.17 precipitation 0.1 270 < th dose independent rect. 6 20
529 113.17 precipitation 0.1 270 < th dose dependent rect. 6 20
536 113.24 radiation 1.0 270 > th dose independent sin 2 NA
554 113.32 temperature 10.0 270 > th dose independent rect. 3 2
556 113.32 temperature 30.0 270 < th dose independent rect. 3 2
557 113.32 humidity 50.0 270 > th dose independent rect. 3 2
560 113.32 atmosphere 995.0 270 > th dose independent rect. 3 2
561 113.32 atmosphere 1010.0 270 < th dose independent rect. 3 2
567 113.32 temperature 10.0 270 > th dose independent rect. 5 22
575 113.35 radiation 40.0 10 < th dose dependent rect. 12 21
585 113.44 wind 1.0 270 > th dose independent rect. 2 4
586 113.45 wind 1.0 270 > th dose independent rect. 13 7
661 113.90 temperature 30.0 10 < th dose independent rect. 20 8
662 113.90 humidity 50.0 10 > th dose independent rect. 20 8
665 113.90 atmosphere 995.0 10 > th dose independent rect. 20 8
666 113.90 radiation 1.0 10 < th dose independent rect. 20 8
671 113.90 temperature 10.0 10 > th dose independent rect. 4 16
673 113.90 atmosphere 1015.0 10 < th dose independent rect. 4 16
674 113.90 radiation 1.0 10 < th dose dependent rect. 20 8
696 114.00 humidity 50.0 270 > th dose dependent rect. 3 2
701 114.03 wind 9.0 10 < th dose independent rect. 20 8
722 114.12 precipitation 0.1 10 < th dose independent rect. 4 16
723 114.12 precipitation 0.1 10 < th dose dependent rect. 4 16
760 114.23 humidity 50.0 270 > th dose dependent rect. 19 7
771 114.31 temperature 10.0 270 > th dose dependent rect. 7 6
772 114.32 precipitation 0.1 30 < th dose independent rect. 20 8
773 114.32 precipitation 0.1 30 < th dose dependent rect. 20 8
774 114.33 wind 9.0 270 < th dose dependent rect. 3 2
798 114.50 humidity 90.0 90 < th dose independent rect. 7 8
812 114.56 atmosphere 995.0 270 > th dose independent rect. 7 18
823 114.63 wind 9.0 30 < th dose independent rect. 4 16
824 114.63 atmosphere 1015.0 270 < th dose independent rect. 6 20
881 114.93 humidity 70.0 10 > th dose independent rect. 4 5
904 115.00 radiation 1.0 270 < th dose independent sin 3 NA
930 115.11 wind 1.0 270 > th dose independent rect. 3 2
947 115.15 atmosphere 995.0 10 > th dose independent rect. 4 16
966 115.23 atmosphere 1015.0 10 < th dose independent rect. 20 8