Os02g0116400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Oligopeptide transporter OPT superfamily protein.
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Os02g0116400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Oligopeptide transporter OPT superfamily protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 153.56 | 0.582 | 7.84 | 0.634 | 3.8 | 3.3 | 1.07 | -3.15 | 0.257 | 7.93 | 14.41 | 1152 | -- | -- |
| 161.91 | 0.593 | 7.76 | 1.3 | 3.78 | 3.26 | 1.27 | -- | 0.437 | 7.95 | 13.54 | 1151 | -- | -- |
| 156.73 | 0.583 | 7.85 | 0.62 | 3.83 | 3.3 | -- | -3.38 | 0.246 | 7.96 | 14.8 | 1126 | -- | -- |
| 166.52 | 0.601 | 7.76 | 1.33 | 3.8 | 3.26 | -- | -- | 0.435 | 7.95 | 13.67 | 1145 | -- | -- |
| 871.54 | 1.37 | 7.95 | 0.591 | -- | 3.28 | -- | -3.26 | 0.268 | -- | 6.835 | 1408 | -- | -- |
| 330.51 | 0.852 | 7.63 | 2.27 | 3.69 | -- | 1.19 | -- | 1 | 7.52 | -- | -- | -- | -- |
| 334.43 | 0.856 | 7.64 | 2.29 | 3.69 | -- | -- | -- | 1 | 7.52 | -- | -- | -- | -- |
| 880.41 | 1.38 | 7.86 | 1.32 | -- | 3.25 | -- | -- | 0.459 | -- | 12.24 | 1407 | -- | -- |
| 173.48 | 0.613 | 7.88 | -- | 3.7 | 3.56 | -- | -- | -0.0854 | 7.7 | 11.04 | 8297 | -- | -- |
| 1061.79 | 1.52 | 7.72 | 2.35 | -- | -- | -- | -- | 1.06 | -- | -- | -- | -- | -- |
| 473.18 | 1.02 | 7.69 | -- | 3.71 | -- | -- | -- | 0.746 | 7.48 | -- | -- | -- | -- |
| 892.45 | 1.39 | 7.98 | -- | -- | 3.62 | -- | -- | -0.0664 | -- | 9.217 | 8617 | -- | -- |
| 1207.39 | 1.62 | 7.78 | -- | -- | -- | -- | -- | 0.798 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 147.09 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 21 |
| 35 | 153.98 | temperature | 15 | 1440 | > th | dose dependent | sin | 5 | NA |
| 68 | 154.29 | temperature | 10 | 1440 | > th | dose dependent | rect. | 4 | 5 |
| 96 | 154.52 | temperature | 15 | 1440 | > th | dose dependent | rect. | 2 | 11 |
| 106 | 154.57 | temperature | 30 | 1440 | < th | dose dependent | rect. | 4 | 5 |
| 125 | 154.80 | temperature | 15 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 154 | 154.98 | temperature | 15 | 1440 | > th | dose dependent | rect. | 11 | 23 |
| 160 | 155.00 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 19 |
| 169 | 155.04 | temperature | 15 | 1440 | > th | dose dependent | no | NA | NA |
| 184 | 155.09 | temperature | 15 | 1440 | > th | dose dependent | rect. | 2 | 23 |
| 238 | 155.39 | temperature | 15 | 1440 | > th | dose dependent | rect. | 7 | 23 |
| 426 | 156.58 | temperature | 30 | 1440 | < th | dose dependent | sin | 6 | NA |
| 615 | 158.12 | temperature | 30 | 1440 | < th | dose dependent | rect. | 2 | 22 |
| 632 | 158.23 | temperature | 30 | 1440 | < th | dose dependent | no | NA | NA |
| 652 | 158.31 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 678 | 158.54 | temperature | 30 | 1440 | < th | dose dependent | rect. | 6 | 23 |
| 830 | 159.48 | temperature | 10 | 1440 | > th | dose dependent | rect. | 22 | 1 |
| 906 | 159.93 | temperature | 15 | 1440 | > th | dose dependent | rect. | 17 | 8 |
| 928 | 160.07 | temperature | 30 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 977 | 160.34 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 6 |