BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0208300 Os02g0208300|J075119P07
(208 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0208300 ABC-2 type transporter domain containing protein 301 3e-82
Os01g0609300 PDR-like ABC transporter (PDR3 ABC transporter) 196 1e-50
Os08g0384500 Similar to PDR-like ABC transporter (PDR3 ABC ... 194 5e-50
Os01g0609900 Similar to PDR-like ABC transporter (PDR4 ABC ... 194 5e-50
Os01g0609066 Putative DNA binding domain containing protein 192 2e-49
Os01g0609200 ABC transporter related domain containing protein 190 7e-49
Os01g0342700 Similar to PDR-like ABC transporter (PDR4 ABC ... 185 2e-47
Os01g0177900 ABC-2 type transporter domain containing protein 166 7e-42
Os06g0554800 Similar to ABC transporter (PDR5-like) isolog ... 160 5e-40
Os11g0587600 Similar to PDR11 ABC transporter 145 2e-35
Os07g0522500 Similar to PDR6 ABC transporter 137 5e-33
Os02g0318500 Similar to PDR6 ABC transporter 134 7e-32
Os08g0544400 Tobacco mosaic virus coat protein family protein 131 4e-31
Os09g0333000 107 6e-24
>Os02g0208300 ABC-2 type transporter domain containing protein
Length = 208
Score = 301 bits (770), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 157/208 (75%), Positives = 157/208 (75%)
Query: 1 GIQNGQTVQPIVDVERTVFYREKAAGMYSALPYAFAQVLIEIPHIFLQTVVYGLIVYSLI 60
GIQNGQTVQPIVDVERTVFYREKAAGMYSALPYAFAQVLIEIPHIFLQTVVYGLIVYSLI
Sbjct: 1 GIQNGQTVQPIVDVERTVFYREKAAGMYSALPYAFAQVLIEIPHIFLQTVVYGLIVYSLI 60
Query: 61 GFDWTVEKXXXXXXXXXXXXXXXXXXXXXAVAMTPNSDIAAIVSTAFYCIWNIFAGFLXX 120
GFDWTVEK AVAMTPNSDIAAIVSTAFYCIWNIFAGFL
Sbjct: 61 GFDWTVEKFFWYMFFMFFTFMYFTFYGMMAVAMTPNSDIAAIVSTAFYCIWNIFAGFLIP 120
Query: 121 XXXXXXXXXXYSWACPVAWTLYGLVASQYGDITNSTLEDGEVVQDYIRRYFGFRHDYLGY 180
YSWACPVAWTLYGLVASQYGDITNSTLEDGEVVQDYIRRYFGFRHDYLGY
Sbjct: 121 RPRIPIWWRWYSWACPVAWTLYGLVASQYGDITNSTLEDGEVVQDYIRRYFGFRHDYLGY 180
Query: 181 XXXXXXXXXXXXXXXXXXSIKVFNFQRR 208
SIKVFNFQRR
Sbjct: 181 VATAVVGFAALFAFVFAFSIKVFNFQRR 208
>Os01g0609300 PDR-like ABC transporter (PDR3 ABC transporter)
Length = 1457
Score = 196 bits (497), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 100/208 (48%), Positives = 128/208 (61%), Gaps = 1/208 (0%)
Query: 1 GIQNGQTVQPIVDVERTVFYREKAAGMYSALPYAFAQVLIEIPHIFLQTVVYGLIVYSLI 60
G+ N +VQP+V VERTVFYRE+AAGMYSA PYAF QV+IEIP+ +Q VYG+IVY++I
Sbjct: 1251 GVMNCTSVQPVVAVERTVFYRERAAGMYSAFPYAFGQVVIEIPYTLVQATVYGIIVYAMI 1310
Query: 61 GFDWTVEKXXXXXXXXXXXXXXXXXXXXXAVAMTPNSDIAAIVSTAFYCIWNIFAGFLXX 120
GF+WT K AV +TPN IA+IVS+AFY IWN+F+GF+
Sbjct: 1311 GFEWTAAKFFWYLFFMVFTLLYFTFYGMMAVGLTPNYHIASIVSSAFYAIWNLFSGFVIP 1370
Query: 121 XXXXXXXXXXYSWACPVAWTLYGLVASQYGDITNSTLEDGEVVQDYIRRYFGFRHDYLGY 180
Y WACPVAWTLYGLV SQ+GDI + +EDG V+ ++ YFGF+H +LG+
Sbjct: 1371 RPRVPIWWRWYCWACPVAWTLYGLVVSQFGDI-ETPMEDGTPVKVFVENYFGFKHSWLGW 1429
Query: 181 XXXXXXXXXXXXXXXXXXSIKVFNFQRR 208
+I FNFQ+R
Sbjct: 1430 VATVVAAFAFLFASLFGFAIMKFNFQKR 1457
>Os08g0384500 Similar to PDR-like ABC transporter (PDR3 ABC transporter)
Length = 732
Score = 194 bits (492), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 97/208 (46%), Positives = 130/208 (62%)
Query: 1 GIQNGQTVQPIVDVERTVFYREKAAGMYSALPYAFAQVLIEIPHIFLQTVVYGLIVYSLI 60
GI +VQP+V VERTVFYRE+AAGMYSALPYAF QV++E+P++ +Q+ VYG+IVY++I
Sbjct: 525 GISYSSSVQPVVAVERTVFYRERAAGMYSALPYAFGQVVVELPYVLVQSAVYGVIVYAMI 584
Query: 61 GFDWTVEKXXXXXXXXXXXXXXXXXXXXXAVAMTPNSDIAAIVSTAFYCIWNIFAGFLXX 120
GF+W +K AV +TP+ +IA+IVS+ FY IWN+F+GF+
Sbjct: 585 GFEWEAKKFFWYLYFMYFTLLYFTFYGMLAVGLTPSYNIASIVSSFFYGIWNLFSGFVIP 644
Query: 121 XXXXXXXXXXYSWACPVAWTLYGLVASQYGDITNSTLEDGEVVQDYIRRYFGFRHDYLGY 180
YSWACPV+WTLYGLVASQ+GD+ + G + ++R YFGF+HD+LG
Sbjct: 645 RPSMPVWWRWYSWACPVSWTLYGLVASQFGDLKEPLRDTGVPIDVFLREYFGFKHDFLGV 704
Query: 181 XXXXXXXXXXXXXXXXXXSIKVFNFQRR 208
SIK+ NFQRR
Sbjct: 705 VAVAVAGFATLFAVSFSLSIKMLNFQRR 732
>Os01g0609900 Similar to PDR-like ABC transporter (PDR4 ABC transporter)
Length = 1388
Score = 194 bits (492), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 99/208 (47%), Positives = 126/208 (60%)
Query: 1 GIQNGQTVQPIVDVERTVFYREKAAGMYSALPYAFAQVLIEIPHIFLQTVVYGLIVYSLI 60
G+QN +VQP+V VERTVFYRE+AAGMYSA PYAF QV IE+P+I +QT++YG++VYS+I
Sbjct: 1181 GVQNSGSVQPVVVVERTVFYRERAAGMYSAFPYAFGQVAIELPYIMVQTLIYGVLVYSMI 1240
Query: 61 GFDWTVEKXXXXXXXXXXXXXXXXXXXXXAVAMTPNSDIAAIVSTAFYCIWNIFAGFLXX 120
GF+WTV K AV +TPN IAAI+S+AFY +WN+F+G+L
Sbjct: 1241 GFEWTVAKFLWYLFFMYFTLLYFTFYGMMAVGLTPNESIAAIISSAFYNVWNLFSGYLIP 1300
Query: 121 XXXXXXXXXXYSWACPVAWTLYGLVASQYGDITNSTLEDGEVVQDYIRRYFGFRHDYLGY 180
Y W CPVAWTLYGLVASQ+GDI + D V ++ YFGF H++L
Sbjct: 1301 RPKIPVWWRWYCWICPVAWTLYGLVASQFGDIQHVLEGDTRTVAQFVTDYFGFHHNFLWV 1360
Query: 181 XXXXXXXXXXXXXXXXXXSIKVFNFQRR 208
+I FNFQRR
Sbjct: 1361 VAVVHVVFAVTFAFLFSFAIMKFNFQRR 1388
>Os01g0609066 Putative DNA binding domain containing protein
Length = 1472
Score = 192 bits (487), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/208 (46%), Positives = 125/208 (60%), Gaps = 1/208 (0%)
Query: 1 GIQNGQTVQPIVDVERTVFYREKAAGMYSALPYAFAQVLIEIPHIFLQTVVYGLIVYSLI 60
G+ NGQ+VQP+V VERTVFYRE+AAGMYSALPYAF QV IE P+ +Q+V+Y +IVYS+I
Sbjct: 1262 GVLNGQSVQPVVSVERTVFYRERAAGMYSALPYAFGQVAIEFPYTLVQSVIYSIIVYSMI 1321
Query: 61 GFDWTVEKXXXXXXXXXXXXXXXXXXXXXAVAMTPNSDIAAIVSTAFYCIWNIFAGFLXX 120
GF WTV K AV +TP+ +A+IVS+AFY IWN+F GF+
Sbjct: 1322 GFQWTVAKFFWYLFFMFFTLLYFTFYGMMAVGLTPSYHVASIVSSAFYAIWNLFTGFVIS 1381
Query: 121 XXXXXXXXXXYSWACPVAWTLYGLVASQYGDITNSTLEDGEVVQDYIRRYFGFRHDYLGY 180
Y W CPVAWTLYGL+ SQYGDI + ++DG V ++ YF F+H +LG+
Sbjct: 1382 RPATPVWWRWYCWICPVAWTLYGLIVSQYGDIV-TPMDDGIPVNVFVENYFDFKHSWLGF 1440
Query: 181 XXXXXXXXXXXXXXXXXXSIKVFNFQRR 208
+I NFQ+R
Sbjct: 1441 VAVVIVAFTMLFAFLFGFAIMKLNFQKR 1468
>Os01g0609200 ABC transporter related domain containing protein
Length = 1444
Score = 190 bits (482), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 95/208 (45%), Positives = 125/208 (60%), Gaps = 1/208 (0%)
Query: 1 GIQNGQTVQPIVDVERTVFYREKAAGMYSALPYAFAQVLIEIPHIFLQTVVYGLIVYSLI 60
G+ N Q+VQP+V VERTVFYRE+AAGMYSA PYAF QV IE P+ +Q+++YG+IVYS+I
Sbjct: 1238 GVLNSQSVQPVVSVERTVFYRERAAGMYSAFPYAFGQVAIEFPYTLVQSIIYGIIVYSMI 1297
Query: 61 GFDWTVEKXXXXXXXXXXXXXXXXXXXXXAVAMTPNSDIAAIVSTAFYCIWNIFAGFLXX 120
GF WT K AV +TP+ +A+IVS+AFY IWN+F+GF+
Sbjct: 1298 GFKWTAAKFFWYLFFMFFTFLYFTFYGMMAVGLTPSYHVASIVSSAFYGIWNLFSGFIIP 1357
Query: 121 XXXXXXXXXXYSWACPVAWTLYGLVASQYGDITNSTLEDGEVVQDYIRRYFGFRHDYLGY 180
Y W CPVAWTLYGLVASQ+GDI + ++DG V+ ++ YF F+H +LG
Sbjct: 1358 RPKVPIWWRWYCWICPVAWTLYGLVASQFGDIM-TPMDDGTPVKIFVENYFDFKHSWLGV 1416
Query: 181 XXXXXXXXXXXXXXXXXXSIKVFNFQRR 208
+I NFQ+R
Sbjct: 1417 VAVVIVAFTMLFAFLFGFAIMKLNFQKR 1444
>Os01g0342700 Similar to PDR-like ABC transporter (PDR4 ABC transporter)
Length = 1451
Score = 185 bits (469), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 98/208 (47%), Positives = 119/208 (57%)
Query: 1 GIQNGQTVQPIVDVERTVFYREKAAGMYSALPYAFAQVLIEIPHIFLQTVVYGLIVYSLI 60
GIQN VQP+V VERTVFYRE+AAGMYS PYAF QV IE+P+I +QT+VYG++VYS+I
Sbjct: 1244 GIQNSGCVQPVVVVERTVFYRERAAGMYSGFPYAFGQVAIELPYILVQTLVYGVLVYSMI 1303
Query: 61 GFDWTVEKXXXXXXXXXXXXXXXXXXXXXAVAMTPNSDIAAIVSTAFYCIWNIFAGFLXX 120
GF+WTV K AV +TPN IAAI+S A Y WN+F+G+L
Sbjct: 1304 GFEWTVAKFIWYLFFMYFTLLYFTFFGMMAVGLTPNESIAAIISPAIYNAWNLFSGYLIP 1363
Query: 121 XXXXXXXXXXYSWACPVAWTLYGLVASQYGDITNSTLEDGEVVQDYIRRYFGFRHDYLGY 180
Y W CPVAWTLYGLVASQ+G+I + V +I Y+GF HD L
Sbjct: 1364 RPKIPVWWRWYCWICPVAWTLYGLVASQFGNIQTKLDGKDQTVAQFITEYYGFHHDLLWL 1423
Query: 181 XXXXXXXXXXXXXXXXXXSIKVFNFQRR 208
+I FNFQRR
Sbjct: 1424 VAVVHVVFTVMFAFLFSFAIMKFNFQRR 1451
>Os01g0177900 ABC-2 type transporter domain containing protein
Length = 371
Score = 166 bits (421), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 86/212 (40%), Positives = 116/212 (54%), Gaps = 4/212 (1%)
Query: 1 GIQNGQTVQPIVDVERTVFYREKAAGMYSALPYAFAQVLIEIPHIFLQTVVYGLIVYSLI 60
GI N +VQP++ +ER V YRE+AAGMYSALP+AF+ V +E P+I +Q+++YG I YSL
Sbjct: 160 GITNATSVQPVISIERFVSYRERAAGMYSALPFAFSLVTVEFPYILVQSLIYGTIFYSLG 219
Query: 61 GFDWTVEKXXXXXXXXXXXXXXXXXXXXXAVAMTPNSDIAAIVSTAFYCIWNIFAGFLXX 120
F+WT K A+TPN +A I++ FY +WN+F GF+
Sbjct: 220 SFEWTAVKFLWYLFFMYFTLLYFTFYGMMTTAITPNHTVAPIIAAPFYTLWNLFCGFMIP 279
Query: 121 XXXXXXXXXXYSWACPVAWTLYGLVASQYGDITNS-TLEDG---EVVQDYIRRYFGFRHD 176
Y WA PV+WTLYGL+ SQ+GD+ L DG D++R +FGFRHD
Sbjct: 280 RKRIPAWWRWYYWANPVSWTLYGLLTSQFGDLDQPLLLADGITTTTAVDFLRDHFGFRHD 339
Query: 177 YLGYXXXXXXXXXXXXXXXXXXSIKVFNFQRR 208
+LG +IK NFQRR
Sbjct: 340 FLGVVAGMVAGFCVLFAVVFALAIKYLNFQRR 371
>Os06g0554800 Similar to ABC transporter (PDR5-like) isolog (PDR1 ABC transporter)
Length = 1167
Score = 160 bits (406), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 84/211 (39%), Positives = 115/211 (54%), Gaps = 3/211 (1%)
Query: 1 GIQNGQTVQPIVDVERTVFYREKAAGMYSALPYAFAQVLIEIPHIFLQTVVYGLIVYSLI 60
GI N TVQPIV +ERTVFYRE+AAGMYSA+PYA AQV++EIP++F+QT Y LIVY+++
Sbjct: 957 GINNCATVQPIVSIERTVFYRERAAGMYSAMPYAIAQVVMEIPYVFVQTAYYTLIVYAMM 1016
Query: 61 GFDWTVEKXXXXXXXXXXXXXXXXXXXXXAVAMTPNSDIAAIVSTAFYCIWNIFAGFLXX 120
F WT K VA++PN ++AAI + AFY ++N+F+GF
Sbjct: 1017 SFQWTAAKFFWFFFVSYFSFLYFTYYGMMTVAISPNHEVAAIFAAAFYSLFNLFSGFFIP 1076
Query: 121 XXXXXXXXXXYSWACPVAWTLYGLVASQYGDITNSTLEDGEVVQD---YIRRYFGFRHDY 177
Y W CP+AWT+YGL+ +QYGD+ G+ Q Y+ +FG+ +
Sbjct: 1077 RPRIPKWWIWYYWLCPLAWTVYGLIVTQYGDLEQIISVPGQSNQTISYYVTHHFGYHRKF 1136
Query: 178 LGYXXXXXXXXXXXXXXXXXXSIKVFNFQRR 208
+ IK NFQ R
Sbjct: 1137 MPVVAPVLVLFAVFFAFMYAICIKKLNFQHR 1167
>Os11g0587600 Similar to PDR11 ABC transporter
Length = 776
Score = 145 bits (367), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 115/211 (54%), Gaps = 3/211 (1%)
Query: 1 GIQNGQTVQPIVDVERTVFYREKAAGMYSALPYAFAQVLIEIPHIFLQTVVYGLIVYSLI 60
G N TVQP+V +ERTVFYRE+AAGMYS+L YAFAQ +E+ + LQ ++Y +I+Y++I
Sbjct: 566 GAANCITVQPVVSIERTVFYRERAAGMYSSLSYAFAQACVEVIYNILQGILYTIIIYAMI 625
Query: 61 GFDWTVEKXXXXXXXXXXXXXXXXXXXXXAVAMTPNSDIAAIVSTAFYCIWNIFAGFLXX 120
G+DW +K VA TP++ +A I+ + +WN+FAGFL
Sbjct: 626 GYDWKADKFFYFMFFIVASFNYFTLFGMMLVACTPSAMLANILISFVLPLWNLFAGFLVV 685
Query: 121 XXXXXXXXXXYSWACPVAWTLYGLVASQY---GDITNSTLEDGEVVQDYIRRYFGFRHDY 177
Y WA PV+WT+YG+VASQ+ GD+ + VV+ ++ G RH +
Sbjct: 686 RPLIPIWWRWYYWANPVSWTIYGVVASQFGKNGDVLSVPGGSPTVVKQFLEDNLGMRHSF 745
Query: 178 LGYXXXXXXXXXXXXXXXXXXSIKVFNFQRR 208
LGY +IK FNFQ+R
Sbjct: 746 LGYVVLTHFGYIIVFFFIFGYAIKYFNFQKR 776
>Os07g0522500 Similar to PDR6 ABC transporter
Length = 497
Score = 137 bits (346), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 110/212 (51%), Gaps = 4/212 (1%)
Query: 1 GIQNGQTVQPIVDVERTVFYREKAAGMYSALPYAFAQVLIEIPHIFLQTVVYGLIVYSLI 60
G N T+ P+V VERTVFYREKAAGMYS L YAFAQ +E + +Q V+Y +++YS+I
Sbjct: 286 GAANLLTLLPVVSVERTVFYREKAAGMYSPLSYAFAQGFVEFCYSAVQGVLYTILIYSMI 345
Query: 61 GFDWTVEKXXXXXXXXXXXXXXXXXXXXXAVAMTPNSDIAAIVSTAFYCIWNIFAGFLXX 120
G++W +K VA T + +AA++ + WN FAGF+
Sbjct: 346 GYEWKADKFFYFLFFMIAAFAYFTLFSMMLVACTASEMLAAVLVSFVLSSWNNFAGFIIP 405
Query: 121 XXXXXXXXXXYSWACPVAWTLYGLVASQYGDITNSTLEDGE----VVQDYIRRYFGFRHD 176
+ WA PV+WT+YG++ASQ+ D G+ VV+D++ + GF+HD
Sbjct: 406 RPLIPVWWRWFYWANPVSWTIYGVIASQFADSDRVVTVPGQSTTMVVKDFLEKNMGFKHD 465
Query: 177 YLGYXXXXXXXXXXXXXXXXXXSIKVFNFQRR 208
+LGY IK NFQ+R
Sbjct: 466 FLGYVVLAHFGYVIIFFFLFGYGIKCLNFQKR 497
>Os02g0318500 Similar to PDR6 ABC transporter
Length = 1315
Score = 134 bits (336), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 78/215 (36%), Positives = 110/215 (51%), Gaps = 11/215 (5%)
Query: 1 GIQNGQTVQPIVDVERTVFYREKAAGMYSALPYAFAQVLIEIPHIFLQTVVYGLIVYSLI 60
G N +VQP+V +ER V+YRE AAGMYS L YAFAQ +E + +Q ++Y +I+Y++I
Sbjct: 1105 GATNCMSVQPVVSIERAVYYRESAAGMYSPLSYAFAQASVEFIYNIIQGILYTVIIYAMI 1164
Query: 61 GFDWTVEKXXXXXXXXXXXXXXXXXXXXXAVAMTPNSDIAAIVSTAFYCIWNIFAGFLXX 120
G+DW K VA TP++ +A I+ T +WN+FAGFL
Sbjct: 1165 GYDWKASKFFYFLFFIVSSFNYFTFFGMMLVACTPSALLANILITFALPLWNLFAGFLIF 1224
Query: 121 XXXXXXXXXXYSWACPVAWTLYGLVASQYGDITNSTLEDG-------EVVQDYIRRYFGF 173
Y WA PV+WT+YG++ASQ+G S G ++++D + G
Sbjct: 1225 RKAIPIWWRWYYWANPVSWTIYGVIASQFGGNGGSISVPGGSHVAMSQILEDNV----GV 1280
Query: 174 RHDYLGYXXXXXXXXXXXXXXXXXXSIKVFNFQRR 208
RHD+LGY SIK NFQ+R
Sbjct: 1281 RHDFLGYVILAHFGFMAAFVLIFGYSIKFLNFQKR 1315
>Os08g0544400 Tobacco mosaic virus coat protein family protein
Length = 475
Score = 131 bits (329), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 102/211 (48%), Gaps = 3/211 (1%)
Query: 1 GIQNGQTVQPIVDVERTVFYREKAAGMYSALPYAFAQVLIEIPHIFLQTVVYGLIVYSLI 60
G N +QP+V +ER V YREKAAGMYS + YA AQV +E+P++F+Q ++ IVY +I
Sbjct: 265 GFMNCSILQPVVGMERVVLYREKAAGMYSTMAYAIAQVAVELPYMFVQVFIFSAIVYPMI 324
Query: 61 GFDWTVEKXXXXXXXXXXXXXXXXXXXXXAVAMTPNSDIAAIVSTAFYCIWNIFAGFLXX 120
GF T K VA+TPN +IAA +S + WN+F+GF+
Sbjct: 325 GFQMTATKFFWFALYMVLSFLYYTLYGMMTVALTPNIEIAAGLSFLIFIFWNVFSGFIIG 384
Query: 121 XXXXXXXXXXYSWACPVAWTLYGLVASQYGDITNSTLEDG---EVVQDYIRRYFGFRHDY 177
WA P AWT+YGL+ SQ GD T G + V++++ Y G + Y
Sbjct: 385 RQMIPVWWRWVYWANPAAWTVYGLMFSQLGDRTELIQVPGQPEQTVKEFLEGYLGLQDRY 444
Query: 178 LGYXXXXXXXXXXXXXXXXXXSIKVFNFQRR 208
SIK FQRR
Sbjct: 445 FNLVTSLHVAIIALFTFLFFLSIKHLKFQRR 475
>Os09g0333000
Length = 239
Score = 107 bits (267), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 51/117 (43%), Positives = 70/117 (59%)
Query: 27 MYSALPYAFAQVLIEIPHIFLQTVVYGLIVYSLIGFDWTVEKXXXXXXXXXXXXXXXXXX 86
MYS LPYA QV IE+P+IFLQT++YG++VY++IG++W+ K
Sbjct: 1 MYSPLPYALGQVAIELPYIFLQTIIYGMLVYAMIGYEWSGAKFFWYLFFMYFTLSYYTFY 60
Query: 87 XXXAVAMTPNSDIAAIVSTAFYCIWNIFAGFLXXXXXXXXXXXXYSWACPVAWTLYG 143
AV +TPN +++ +VST FY +WN+F+GFL Y W CPVAWTL G
Sbjct: 61 GMMAVGLTPNYNMSTVVSTGFYTMWNLFSGFLIPLTRIPIWWRWYYWICPVAWTLNG 117
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.327 0.141 0.448
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 4,780,691
Number of extensions: 133902
Number of successful extensions: 329
Number of sequences better than 1.0e-10: 14
Number of HSP's gapped: 307
Number of HSP's successfully gapped: 14
Length of query: 208
Length of database: 17,035,801
Length adjustment: 96
Effective length of query: 112
Effective length of database: 12,023,257
Effective search space: 1346604784
Effective search space used: 1346604784
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 154 (63.9 bits)