Os07g0522500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to PDR6 ABC transporter.
FiT-DB / Search/ Help/ Sample detail
|
Os07g0522500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to PDR6 ABC transporter.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 305.5 | 0.821 | 10.1 | 2.7 | 0.398 | -0.581 | 0.532 | -5.92 | 1.11 | 20.8 | 0.008215 | 4325 | -- | -- |
| 310.96 | 0.821 | 10.4 | 1.64 | 0.398 | -0.906 | 0.267 | -- | 0.486 | 20.9 | 20 | 23182 | -- | -- |
| 305.67 | 0.814 | 10.1 | 2.66 | 0.35 | -0.554 | -- | -6.14 | 1.1 | 21 | 6.335e-05 | 4259 | -- | -- |
| 311.34 | 0.822 | 10.4 | 1.65 | 0.399 | -0.91 | -- | -- | 0.485 | 21.5 | 20.06 | 23220 | -- | -- |
| 311.32 | 0.822 | 10.1 | 2.67 | -- | -0.854 | -- | -7.15 | 1.1 | -- | 4.125e-06 | 4186 | -- | -- |
| 338.07 | 0.862 | 10.3 | 1.55 | 0.396 | -- | 0.475 | -- | 0.826 | 21.1 | -- | -- | -- | -- |
| 338.78 | 0.862 | 10.3 | 1.54 | 0.393 | -- | -- | -- | 0.824 | 21.5 | -- | -- | -- | -- |
| 317.65 | 0.83 | 10.4 | 1.63 | -- | -0.918 | -- | -- | 0.463 | -- | 20 | 22589 | -- | -- |
| 378.83 | 0.907 | 10.4 | -- | 0.398 | -0.828 | -- | -- | 0.338 | 22.6 | 16.14 | 22011 | -- | -- |
| 347.84 | 0.871 | 10.3 | 1.54 | -- | -- | -- | -- | 0.823 | -- | -- | -- | -- | -- |
| 400.93 | 0.937 | 10.4 | -- | 0.396 | -- | -- | -- | 0.653 | 21.7 | -- | -- | -- | -- |
| 384.13 | 0.913 | 10.4 | -- | -- | -0.847 | -- | -- | 0.303 | -- | 15.86 | 21197 | -- | -- |
| 410.25 | 0.945 | 10.3 | -- | -- | -- | -- | -- | 0.653 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 288.42 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 4 |
| 2 | 288.94 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 3 | 289.21 | wind | 1.0 | 43200 | > th | dose independent | rect. | 4 | 4 |
| 4 | 289.99 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 5 | 290.17 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 6 | 290.72 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 8 | 291.12 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 5 | 3 |
| 9 | 291.23 | wind | 1.0 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 10 | 291.28 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 13 | 291.51 | wind | 1.0 | 43200 | < th | dose independent | rect. | 4 | 4 |
| 15 | 291.57 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 5 | 5 |
| 29 | 292.19 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 5 | 8 |
| 36 | 292.31 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 5 | 8 |
| 38 | 292.36 | wind | 5.0 | 14400 | < th | dose independent | rect. | 15 | 4 |
| 47 | 292.67 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 48 | 292.71 | wind | 1.0 | 43200 | > th | dose independent | rect. | 2 | 6 |
| 90 | 293.49 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 2 |
| 94 | 293.53 | wind | 5.0 | 14400 | > th | dose independent | rect. | 15 | 4 |
| 130 | 293.94 | atmosphere | 1005.0 | 14400 | < th | dose independent | sin | 5 | NA |
| 151 | 294.13 | wind | 1.0 | 43200 | < th | dose independent | rect. | 2 | 6 |
| 157 | 294.18 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 6 |
| 167 | 294.26 | atmosphere | 1005.0 | 14400 | > th | dose independent | sin | 5 | NA |
| 230 | 294.83 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 271 | 295.20 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 276 | 295.22 | atmosphere | 1000.0 | 14400 | > th | dose independent | rect. | 20 | 2 |
| 303 | 295.41 | wind | 5.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 338 | 295.69 | atmosphere | 1000.0 | 14400 | < th | dose independent | rect. | 20 | 3 |
| 367 | 295.87 | atmosphere | 1000.0 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 368 | 295.87 | atmosphere | 1000.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 388 | 295.97 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 15 | 4 |
| 397 | 296.05 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 401 | 296.08 | wind | 9.0 | 4320 | > th | dose independent | rect. | 19 | 2 |
| 461 | 296.39 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 497 | 296.59 | atmosphere | 1015.0 | 14400 | < th | dose dependent | rect. | 23 | 2 |
| 508 | 296.65 | wind | 1.0 | 43200 | > th | dose independent | rect. | 22 | 10 |
| 531 | 296.78 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 535 | 296.79 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 17 | 2 |
| 543 | 296.81 | atmosphere | 995.0 | 14400 | > th | dose dependent | rect. | 24 | 1 |
| 590 | 297.00 | wind | 9.0 | 4320 | > th | dose independent | rect. | 19 | 4 |
| 628 | 297.12 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 12 | 23 |
| 630 | 297.12 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 19 | 7 |
| 637 | 297.13 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 4 | 23 |
| 638 | 297.13 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 12 | 23 |
| 665 | 297.20 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 24 | 22 |
| 671 | 297.21 | atmosphere | 1005.0 | 14400 | > th | dose independent | no | NA | NA |
| 714 | 297.28 | atmosphere | 1005.0 | 14400 | < th | dose independent | no | NA | NA |
| 715 | 297.28 | wind | 9.0 | 4320 | > th | dose independent | rect. | 19 | 7 |
| 769 | 297.37 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 14 | 7 |
| 781 | 297.39 | atmosphere | 1005.0 | 14400 | < th | dose dependent | rect. | 23 | 2 |
| 801 | 297.43 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 9 | 23 |
| 811 | 297.45 | atmosphere | 1015.0 | 14400 | < th | dose dependent | sin | 10 | NA |
| 838 | 297.48 | atmosphere | 1005.0 | 14400 | < th | dose dependent | rect. | 22 | 5 |
| 846 | 297.49 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 9 | 23 |
| 948 | 297.62 | atmosphere | 995.0 | 14400 | > th | dose dependent | sin | 10 | NA |
| 975 | 297.66 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 1 |