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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0177900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : ABC-2 type transporter domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 5.45 (0.0308) R2 : 0.398
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.31 (0.0807) R2dC : 0.351 R2C : 0.343
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.368 (0.0648) R2dN8 : 0.0551 R2N8 : 0.0468
σ : 0.58
deviance : 153.92
__
_____
C
peak time of C : 6.23
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
135.56 0.547 5.47 -0.237 1.54 0.927 1.19 1.15 0.237 5.45 20.8 9 -- --
136.36 0.544 5.47 -0.389 1.56 0.96 1.26 -- 0.232 5.47 22.92 9 -- --
138.76 0.549 5.48 -0.325 1.54 0.889 -- 0.63 0.207 5.47 20.9 10 -- --
138.68 0.548 5.49 -0.403 1.56 0.94 -- -- 0.199 5.49 22.63 6 -- --
241.55 0.728 5.5 -0.315 -- 0.624 -- -7.33 0.367 -- 31.66 22 -- --
151.19 0.576 5.45 -0.228 1.31 -- 0.77 -- 0.346 6.23 -- -- -- --
152.65 0.579 5.45 -0.219 1.32 -- -- -- 0.344 6.22 -- -- -- --
221.48 0.693 5.51 -0.142 -- -0.939 -- -- 0.318 -- 26.23 443 -- --
142.7 0.556 5.48 -- 1.52 0.86 -- -- 0.265 5.53 22.9 6 -- --
242.36 0.727 5.48 -0.183 -- -- -- -- 0.373 -- -- -- -- --
153.92 0.58 5.45 -- 1.31 -- -- -- 0.368 6.23 -- -- -- --
220.3 0.691 5.47 -- -- -0.886 -- -- 0.425 -- 25.4 433 -- --
243.25 0.728 5.47 -- -- -- -- -- 0.393 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 129.05 humidity 80 14400 > th dose independent rect. 22 1
2 131.90 temperature 30 10 < th dose dependent rect. 1 21
3 132.01 wind 9 14400 > th dose dependent rect. 16 1
4 132.07 wind 9 14400 > th dose independent rect. 16 1
8 132.31 wind 9 14400 < th dose independent rect. 10 3
10 132.43 temperature 20 10 > th dose dependent rect. 4 21
11 132.52 wind 9 14400 > th dose dependent rect. 11 3
15 132.69 temperature 30 10 < th dose dependent rect. 1 19
16 132.72 wind 9 14400 > th dose independent rect. 10 3
21 132.91 wind 9 14400 < th dose independent rect. 6 7
49 133.39 temperature 25 30 > th dose independent rect. 7 12
50 133.39 temperature 25 30 > th dose independent rect. 20 23
54 133.45 temperature 25 10 < th dose independent rect. 24 22
69 133.69 wind 9 14400 > th dose independent rect. 1 13
73 133.75 wind 9 14400 > th dose dependent rect. 1 13
77 133.78 temperature 30 10 < th dose dependent rect. 1 17
81 133.80 wind 3 14400 < th dose dependent rect. 23 1
82 133.82 temperature 25 90 < th dose independent rect. 7 14
83 133.84 temperature 25 10 > th dose independent rect. 5 14
85 133.88 temperature 25 90 < th dose independent rect. 7 12
93 133.96 temperature 30 10 < th dose dependent rect. 1 15
95 133.97 temperature 30 10 < th dose dependent sin 0 NA
98 134.04 humidity 80 14400 < th dose independent rect. 22 1
99 134.04 temperature 25 90 < th dose independent rect. 24 22
112 134.20 temperature 25 10 < th dose independent rect. 6 22
122 134.29 temperature 25 10 < th dose independent sin 23 NA
127 134.32 temperature 25 30 > th dose independent rect. 24 19
131 134.35 wind 9 14400 > th dose dependent sin 2 NA
136 134.36 temperature 20 30 > th dose dependent rect. 20 23
143 134.40 temperature 25 90 < th dose independent sin 23 NA
144 134.40 wind 9 14400 < th dose independent rect. 1 13
145 134.40 wind 9 14400 > th dose dependent rect. 9 9
150 134.41 temperature 25 90 > th dose independent rect. 7 18
157 134.45 temperature 25 10 > th dose independent sin 23 NA
171 134.49 humidity 80 1440 < th dose independent rect. 7 6
186 134.56 radiation 1 1440 < th dose independent rect. 11 20
202 134.64 temperature 25 10 > th dose independent rect. 5 21
206 134.67 radiation 1 1440 > th dose independent rect. 11 20
211 134.68 wind 5 14400 < th dose independent rect. 11 1
214 134.69 temperature 25 90 > th dose independent sin 23 NA
231 134.74 temperature 20 10 > th dose dependent rect. 5 14
251 134.85 wind 5 4320 > th dose independent rect. 14 12
257 134.87 wind 5 14400 > th dose independent rect. 11 1
262 134.88 temperature 25 10 < th dose independent rect. 6 14
271 134.90 humidity 80 1440 > th dose independent rect. 7 7
272 134.90 humidity 60 43200 < th dose independent rect. 23 13
299 134.99 humidity 80 1440 < th dose independent rect. 3 10
320 135.07 wind 5 4320 > th dose independent rect. 14 8
336 135.15 radiation 1 1440 < th dose dependent rect. 11 19
360 135.23 temperature 20 10 > th dose dependent sin 1 NA
364 135.24 wind 9 14400 > th dose dependent rect. 20 22
365 135.25 wind 9 14400 > th dose independent sin 3 NA
367 135.25 temperature 20 1440 > th dose dependent rect. 21 1
374 135.26 humidity 70 43200 > th dose independent rect. 16 1
375 135.26 wind 5 4320 < th dose independent rect. 14 12
394 135.31 humidity 60 43200 < th dose independent rect. 8 4
395 135.31 humidity 80 1440 > th dose independent rect. 4 10
410 135.35 temperature 25 10 < th dose independent rect. 1 17
412 135.36 humidity 80 1440 < th dose independent rect. 24 13
424 135.40 wind 1 14400 > th dose dependent rect. 23 1
466 135.48 temperature 20 10 > th dose dependent rect. 13 23
470 135.50 wind 9 14400 < th dose independent rect. 16 1
488 135.54 wind 9 14400 > th dose independent rect. 9 9
498 135.55 wind 9 14400 > th dose independent rect. 1 17
500 135.56 wind 9 14400 < th dose independent rect. 10 8
508 135.57 wind 9 14400 < th dose independent sin 3 NA
511 135.57 wind 9 14400 < th dose independent rect. 6 12
512 135.57 wind 9 14400 > th dose independent rect. 4 14
544 135.62 humidity 80 1440 < th dose independent sin 4 NA
555 135.63 wind 5 4320 < th dose independent rect. 14 8
559 135.64 humidity 90 4320 < th dose independent rect. 6 1
567 135.65 wind 1 43200 < th dose dependent rect. 6 2
575 135.67 wind 1 14400 > th dose independent rect. 21 2
609 135.74 wind 7 14400 > th dose independent rect. 5 5
632 135.77 temperature 10 10 > th dose dependent sin 1 NA
644 135.79 wind 9 14400 < th dose independent rect. 1 17
676 135.84 wind 1 14400 < th dose independent rect. 20 3
685 135.85 temperature 20 14400 < th dose dependent rect. 3 1
715 135.91 temperature 20 10 > th dose dependent no NA NA
733 135.95 wind 5 4320 > th dose dependent rect. 14 7
744 135.97 temperature 20 10 > th dose dependent rect. 7 18
751 135.99 wind 9 14400 > th dose independent rect. 20 22
768 136.03 radiation 1 14400 > th dose independent rect. 9 1
797 136.07 humidity 60 43200 > th dose independent rect. 24 11
829 136.14 wind 3 4320 > th dose dependent rect. 20 1
842 136.16 humidity 70 720 > th dose independent rect. 16 16
848 136.17 humidity 60 43200 < th dose dependent rect. 10 3
851 136.18 wind 5 4320 > th dose independent rect. 14 4
860 136.20 humidity 80 1440 > th dose independent sin 4 NA
868 136.21 temperature 30 10 < th dose dependent rect. 19 23
870 136.22 radiation 1 14400 < th dose independent rect. 9 1
878 136.23 wind 1 4320 < th dose independent rect. 7 1
889 136.24 humidity 60 43200 < th dose dependent rect. 11 1
892 136.24 temperature 20 10 > th dose dependent rect. 5 17
896 136.24 temperature 20 10 > th dose dependent rect. 23 23
902 136.26 wind 5 4320 > th dose dependent rect. 15 3
908 136.27 wind 5 4320 > th dose dependent rect. 17 1
917 136.29 wind 1 4320 > th dose independent rect. 7 1
943 136.33 wind 5 4320 < th dose independent rect. 20 1
955 136.34 wind 9 14400 > th dose dependent rect. 11 15
967 136.36 temperature 30 1440 < th dose dependent rect. 21 1
972 136.37 temperature 25 10 < th dose independent rect. 1 15
985 136.39 wind 9 14400 > th dose dependent rect. 11 18
994 136.40 temperature 30 10 < th dose dependent rect. 9 23
1000 136.41 temperature 20 10 > th dose dependent rect. 7 23