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Os02g0318500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to PDR6 ABC transporter.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.1 (0.045) R2 : 0.767
β1 : -1.5 (0.228) R2dD : 0.046 R2D : 0.102
β2 : 2.67 (0.107) R2dC : 0.327 R2C : 0.225
β3 : 3.63 (0.171) R2dE : 0.273 R2E : 0.186
β4 : 4.55 (0.417) R2dD*C : 0.063 R2D*C : 0.000373
β5 : 4.75 (0.657) R2dD*E : 0.056 R2D*E : 0.0313
γ1 : 0.756 (0.102) R2dN8 : 0.0444 R2N8 : 0.103
σ : 0.83
deviance : 312.4
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C
peak time of C : 10.3
E
wheather : radiation
threshold : 1.448
memory length : 5610
response mode : > th
dose dependency : dose independent
G
type of G : sin
peak or start time of G : 9.1
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
312.4 0.83 10.1 -1.5 2.67 3.63 4.55 4.75 0.756 10.3 1.448 5610 9.1 --
333.7 0.851 10 -2.11 3.18 3.59 4.53 -- 0.7 9.98 1.75 5454 8.71 --
384.1 0.913 10.1 -1.19 2.47 3.37 -- 4.41 0.694 10 1.51 5686 8.92 --
387.06 0.916 10 -2.12 3.5 3.48 -- -- 0.699 10.2 1.72 5328 8.58 --
730.96 1.26 10.2 -1.27 -- 3.25 -- 4.5 0.764 -- 1.507 5765 9.01 --
618.31 1.17 9.97 -2.44 2.4 -- 3.88 -- 1.26 9.56 -- -- -- --
673.58 1.22 9.97 -2.3 2.4 -- -- -- 1.26 9.37 -- -- -- --
772.92 1.29 10.1 -1.68 -- 2.96 -- -- 0.926 -- 2.381 5744 9.43 --
455.94 0.994 10.1 -- 3.15 3.7 -- -- 0.625 10 2.55 8213 8.74 --
1010.76 1.49 10 -2.31 -- -- -- -- 1.27 -- -- -- -- --
812.44 1.33 9.91 -- 2.4 -- -- -- 1.52 9.44 -- -- -- --
853.6 1.36 10.1 -- -- 3.11 -- -- 0.957 -- 2.67 5760 9.4 --
1151.29 1.58 9.98 -- -- -- -- -- 1.53 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 314.17 humidity 90.0 43200 > th dose dependent rect. 19 3
2 314.36 humidity 90.0 43200 > th dose dependent rect. 21 1
3 314.41 humidity 90.0 43200 < th dose independent rect. 17 4
5 314.89 humidity 90.0 43200 < th dose independent rect. 17 6
7 314.99 radiation 30.0 14400 < th dose independent rect. 15 17
8 315.06 humidity 90.0 43200 < th dose independent rect. 19 4
9 315.26 humidity 90.0 43200 < th dose independent rect. 20 1
17 315.98 humidity 90.0 43200 > th dose independent rect. 9 1
20 316.18 humidity 70.0 14400 > th dose independent rect. 19 2
24 316.44 humidity 90.0 43200 < th dose independent rect. 9 2
25 316.53 humidity 80.0 43200 > th dose dependent rect. 17 1
30 316.94 radiation 10.0 14400 < th dose independent rect. 16 14
32 317.11 humidity 70.0 14400 > th dose independent rect. 19 12
33 317.12 humidity 70.0 14400 > th dose independent rect. 19 10
34 317.17 humidity 90.0 43200 > th dose independent rect. 21 2
40 317.46 humidity 70.0 14400 > th dose independent rect. 19 8
44 317.70 humidity 70.0 14400 > th dose independent rect. 19 6
48 317.90 humidity 70.0 14400 < th dose independent rect. 19 1
52 318.50 humidity 70.0 14400 < th dose independent rect. 19 12
58 319.06 humidity 90.0 43200 > th dose independent rect. 17 6
63 319.57 humidity 90.0 43200 < th dose independent rect. 9 14
85 320.36 radiation 1.0 14400 < th dose independent rect. 17 10
86 320.37 radiation 1.0 14400 < th dose independent rect. 17 2
91 320.42 radiation 1.0 14400 < th dose independent rect. 17 8
105 320.72 humidity 80.0 43200 > th dose dependent rect. 10 1
129 321.66 humidity 90.0 43200 > th dose independent rect. 8 15
131 321.78 radiation 1.0 14400 > th dose independent rect. 17 2
147 322.01 radiation 30.0 14400 < th dose dependent rect. 18 11
164 322.86 radiation 1.0 14400 > th dose dependent rect. 17 13
172 323.14 radiation 10.0 14400 < th dose dependent rect. 18 1
182 323.36 radiation 10.0 14400 < th dose dependent rect. 18 9
187 323.46 radiation 30.0 14400 > th dose independent rect. 16 16
191 323.62 radiation 30.0 14400 > th dose independent rect. 7 1
212 323.85 radiation 20.0 14400 > th dose dependent rect. 16 15
253 324.46 humidity 90.0 43200 > th dose dependent rect. 9 14
288 325.18 humidity 90.0 43200 < th dose independent sin 19 NA
290 325.19 wind 5.0 43200 < th dose independent rect. 5 2
350 326.29 radiation 1.0 14400 < th dose dependent sin 17 NA
351 326.29 radiation 1.0 14400 > th dose dependent rect. 17 2
368 326.46 humidity 80.0 43200 > th dose independent rect. 12 1
393 326.67 radiation 1.0 14400 < th dose dependent rect. 7 12
407 326.86 humidity 60.0 720 > th dose dependent rect. 16 9
408 326.86 humidity 80.0 43200 > th dose dependent rect. 9 10
415 326.94 radiation 1.0 14400 < th dose dependent rect. 7 20
435 327.15 radiation 1.0 14400 < th dose dependent rect. 9 10
447 327.21 radiation 1.0 14400 < th dose dependent rect. 9 14
470 327.39 radiation 1.0 14400 < th dose dependent rect. 9 18
472 327.40 radiation 1.0 14400 < th dose dependent rect. 9 20
502 327.68 radiation 1.0 14400 < th dose independent rect. 7 20
508 327.70 radiation 1.0 14400 < th dose independent rect. 7 12
512 327.73 radiation 1.0 14400 < th dose independent rect. 7 18
549 328.41 humidity 90.0 43200 > th dose independent sin 19 NA
551 328.42 humidity 90.0 43200 < th dose independent rect. 3 20
554 328.44 radiation 1.0 14400 < th dose independent sin 16 NA
561 328.51 radiation 30.0 14400 > th dose dependent rect. 15 17
563 328.52 precipitation 0.1 43200 > th dose dependent rect. 19 2
565 328.54 wind 5.0 43200 > th dose independent rect. 5 2
586 328.99 radiation 1.0 14400 < th dose independent rect. 17 21
612 329.22 radiation 1.0 14400 > th dose independent rect. 7 12
653 329.60 radiation 30.0 14400 < th dose independent rect. 15 2
687 329.88 radiation 1.0 14400 < th dose independent rect. 17 17
709 330.01 humidity 80.0 43200 > th dose independent rect. 11 7
715 330.09 radiation 1.0 14400 < th dose independent rect. 13 14
717 330.10 precipitation 0.1 43200 < th dose independent rect. 15 4
719 330.10 precipitation 0.1 43200 < th dose dependent rect. 15 4
720 330.11 radiation 1.0 14400 < th dose independent rect. 13 6
727 330.14 radiation 1.0 14400 < th dose independent rect. 13 12
729 330.16 radiation 1.0 14400 > th dose independent sin 16 NA
780 330.36 precipitation 0.1 43200 > th dose independent rect. 15 4
851 330.86 humidity 80.0 43200 < th dose independent rect. 12 1
856 330.90 humidity 90.0 43200 > th dose dependent sin 19 NA
870 331.05 radiation 1.0 14400 > th dose independent rect. 17 21
952 331.82 radiation 1.0 14400 > th dose independent rect. 13 6
989 331.98 radiation 1.0 14400 > th dose independent rect. 17 16