Os01g0609200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : ABC transporter related domain containing protein.
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Os01g0609200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : ABC transporter related domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 243.87 | 0.734 | 6.67 | 2.33 | 0.79 | -2.47 | -0.364 | 3.4 | 1.56 | 20 | 20.72 | 252 | -- | -- |
| 249.57 | 0.736 | 6.75 | 1.84 | 0.65 | -2.68 | 0.0636 | -- | 1.45 | 19.9 | 16.59 | 207 | -- | -- |
| 244.02 | 0.728 | 6.67 | 2.33 | 0.74 | -2.49 | -- | 3.43 | 1.55 | 19.8 | 21.05 | 214 | -- | -- |
| 248.63 | 0.734 | 6.73 | 1.8 | 0.658 | -2.79 | -- | -- | 1.39 | 19.9 | 15.5 | 211 | -- | -- |
| 253.04 | 0.745 | 6.68 | 2.06 | -- | -2.29 | -- | 2.59 | 1.47 | -- | 21.05 | 214 | -- | -- |
| 336.44 | 0.86 | 6.82 | 1.19 | 0.747 | -- | -0.0451 | -- | 0.985 | 0.96 | -- | -- | -- | -- |
| 336.45 | 0.859 | 6.82 | 1.19 | 0.747 | -- | -- | -- | 0.985 | 0.966 | -- | -- | -- | -- |
| 255.66 | 0.748 | 6.72 | 1.72 | -- | -2.69 | -- | -- | 1.38 | -- | 15.54 | 75 | -- | -- |
| 321.98 | 0.84 | 6.79 | -- | 0.272 | -1.77 | -- | -- | 1.11 | 21.3 | 20.3 | 132 | -- | -- |
| 371.17 | 0.9 | 6.8 | 1.22 | -- | -- | -- | -- | 0.999 | -- | -- | -- | -- | -- |
| 373.62 | 0.904 | 6.85 | -- | 0.766 | -- | -- | -- | 0.853 | 1.03 | -- | -- | -- | -- |
| 325.87 | 0.844 | 6.78 | -- | -- | -1.88 | -- | -- | 1.12 | -- | 20.4 | 8 | -- | -- |
| 410.14 | 0.945 | 6.83 | -- | -- | -- | -- | -- | 0.864 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 236.91 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 19 |
| 3 | 237.25 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 16 |
| 4 | 237.26 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 9 | 238.68 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 19 |
| 13 | 239.15 | temperature | 20 | 720 | > th | dose dependent | sin | 5 | NA |
| 14 | 239.20 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 16 |
| 21 | 239.50 | temperature | 15 | 720 | > th | dose dependent | rect. | 1 | 17 |
| 24 | 239.62 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 51 | 240.82 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 22 |
| 69 | 241.73 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 77 | 241.92 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 92 | 242.27 | temperature | 20 | 270 | > th | dose dependent | rect. | 15 | 23 |
| 118 | 242.91 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 4 |
| 128 | 243.08 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 6 |
| 149 | 243.47 | temperature | 10 | 720 | > th | dose dependent | rect. | 16 | 23 |
| 189 | 244.24 | temperature | 25 | 1440 | > th | dose independent | rect. | 15 | 6 |
| 201 | 244.35 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 214 | 244.53 | temperature | 20 | 270 | > th | dose dependent | no | NA | NA |
| 221 | 244.62 | temperature | 25 | 1440 | < th | dose independent | rect. | 15 | 6 |
| 227 | 244.73 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 230 | 244.76 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 262 | 245.20 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 319 | 245.82 | temperature | 20 | 270 | > th | dose dependent | rect. | 6 | 23 |
| 336 | 246.00 | temperature | 30 | 720 | < th | dose dependent | rect. | 22 | 18 |
| 348 | 246.15 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 19 |
| 366 | 246.41 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 5 |
| 371 | 246.42 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 386 | 246.58 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 16 |
| 406 | 246.77 | temperature | 20 | 1440 | > th | dose dependent | sin | 17 | NA |
| 421 | 246.87 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 1 |
| 445 | 246.98 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 497 | 247.45 | temperature | 30 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 502 | 247.50 | temperature | 30 | 720 | < th | dose dependent | sin | 5 | NA |
| 507 | 247.54 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 532 | 247.74 | temperature | 20 | 10 | > th | dose dependent | no | NA | NA |
| 538 | 247.79 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 542 | 247.85 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 562 | 247.98 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 583 | 248.14 | temperature | 15 | 720 | > th | dose dependent | rect. | 10 | 23 |
| 628 | 248.45 | temperature | 15 | 720 | > th | dose dependent | rect. | 8 | 23 |
| 692 | 248.90 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 23 |
| 696 | 248.94 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 715 | 249.13 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 21 |
| 729 | 249.22 | temperature | 30 | 10 | < th | dose dependent | rect. | 22 | 23 |
| 732 | 249.23 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 20 |
| 768 | 249.48 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 825 | 249.80 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 23 |
| 842 | 249.92 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 14 |
| 849 | 249.96 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 857 | 250.00 | temperature | 25 | 1440 | > th | dose independent | rect. | 19 | 2 |
| 873 | 250.19 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 7 |
| 888 | 250.28 | temperature | 25 | 1440 | < th | dose independent | rect. | 19 | 2 |