Os02g0208300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : ABC-2 type transporter domain containing protein.
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Os02g0208300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : ABC-2 type transporter domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 198.51 | 0.662 | 8.86 | 0.42 | 1.78 | 1.78 | 1.53 | 1.23 | 0.409 | 3.26 | 5.1 | 1775 | -- | -- |
| 199.05 | 0.657 | 8.86 | 0.435 | 1.77 | 1.66 | 1.64 | -- | 0.419 | 3.21 | 4.9 | 1775 | -- | -- |
| 205.96 | 0.668 | 8.87 | 0.382 | 1.78 | 1.75 | -- | 1.28 | 0.401 | 3.2 | 5.1 | 1775 | -- | -- |
| 206.36 | 0.669 | 8.85 | 0.343 | 1.78 | 1.55 | -- | -- | 0.413 | 3.19 | 4.958 | 1770 | -- | -- |
| 343.96 | 0.864 | 8.91 | 0.655 | -- | 2.18 | -- | 1.56 | 0.352 | -- | 4.4 | 1070 | -- | -- |
| 225.97 | 0.705 | 8.85 | 0.0164 | 1.78 | -- | 1.33 | -- | 0.391 | 2.96 | -- | -- | -- | -- |
| 231.9 | 0.713 | 8.86 | -0.0133 | 1.78 | -- | -- | -- | 0.384 | 2.89 | -- | -- | -- | -- |
| 343.01 | 0.863 | 8.86 | 0.589 | -- | 2.06 | -- | -- | 0.379 | -- | 4 | 1070 | -- | -- |
| 209.24 | 0.674 | 8.86 | -- | 1.79 | 1.46 | -- | -- | 0.391 | 3.14 | 5 | 1775 | -- | -- |
| 414.4 | 0.951 | 8.85 | 0.0626 | -- | -- | -- | -- | 0.429 | -- | -- | -- | -- | -- |
| 231.91 | 0.712 | 8.86 | -- | 1.78 | -- | -- | -- | 0.385 | 2.89 | -- | -- | -- | -- |
| 351.28 | 0.873 | 8.88 | -- | -- | 1.84 | -- | -- | 0.321 | -- | 3.899 | 1070 | -- | -- |
| 414.5 | 0.95 | 8.85 | -- | -- | -- | -- | -- | 0.423 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 184.78 | temperature | 10 | 270 | > th | dose dependent | rect. | 7 | 17 |
| 3 | 185.96 | temperature | 15 | 10 | > th | dose dependent | rect. | 8 | 18 |
| 10 | 187.36 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 20 |
| 32 | 189.84 | temperature | 10 | 270 | > th | dose dependent | rect. | 20 | 15 |
| 90 | 193.14 | radiation | 20 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 115 | 193.81 | humidity | 60 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 141 | 194.16 | radiation | 20 | 43200 | < th | dose independent | rect. | 14 | 2 |
| 143 | 194.22 | radiation | 30 | 43200 | < th | dose dependent | rect. | 15 | 1 |
| 150 | 194.62 | radiation | 20 | 43200 | > th | dose independent | sin | 13 | NA |
| 168 | 194.76 | radiation | 10 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 174 | 194.88 | wind | 9 | 14400 | > th | dose dependent | rect. | 4 | 10 |
| 201 | 195.06 | wind | 9 | 14400 | > th | dose dependent | rect. | 1 | 13 |
| 206 | 195.09 | temperature | 30 | 90 | < th | dose dependent | rect. | 23 | 22 |
| 211 | 195.18 | humidity | 70 | 43200 | < th | dose dependent | rect. | 24 | 11 |
| 216 | 195.23 | radiation | 20 | 43200 | > th | dose dependent | rect. | 13 | 4 |
| 252 | 195.37 | radiation | 30 | 43200 | < th | dose dependent | rect. | 14 | 3 |
| 259 | 195.43 | humidity | 60 | 43200 | > th | dose independent | rect. | 24 | 12 |
| 277 | 195.56 | radiation | 1 | 30 | > th | dose independent | rect. | 8 | 11 |
| 294 | 195.60 | humidity | 70 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 300 | 195.64 | radiation | 20 | 43200 | < th | dose independent | rect. | 13 | 14 |
| 310 | 195.65 | radiation | 20 | 43200 | < th | dose independent | rect. | 13 | 11 |
| 346 | 195.73 | radiation | 40 | 43200 | < th | dose dependent | rect. | 13 | 6 |
| 347 | 195.73 | radiation | 40 | 43200 | < th | dose dependent | rect. | 13 | 14 |
| 351 | 195.74 | radiation | 40 | 43200 | < th | dose dependent | rect. | 13 | 12 |
| 443 | 195.90 | radiation | 30 | 43200 | < th | dose independent | sin | 16 | NA |
| 447 | 195.92 | radiation | 30 | 43200 | > th | dose independent | rect. | 11 | 6 |
| 484 | 195.96 | wind | 1 | 43200 | < th | dose dependent | rect. | 6 | 2 |
| 488 | 195.98 | radiation | 20 | 43200 | > th | dose dependent | sin | 14 | NA |
| 490 | 195.99 | temperature | 20 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 541 | 196.15 | humidity | 60 | 43200 | > th | dose independent | rect. | 8 | 4 |
| 544 | 196.16 | radiation | 40 | 43200 | < th | dose dependent | sin | 15 | NA |
| 609 | 196.34 | humidity | 70 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 694 | 196.43 | wind | 9 | 14400 | > th | dose dependent | rect. | 9 | 5 |
| 699 | 196.44 | humidity | 60 | 43200 | < th | dose independent | rect. | 24 | 13 |
| 700 | 196.44 | wind | 1 | 14400 | < th | dose dependent | rect. | 24 | 6 |
| 703 | 196.45 | humidity | 60 | 43200 | < th | dose independent | rect. | 20 | 17 |
| 720 | 196.47 | humidity | 60 | 43200 | < th | dose independent | sin | 8 | NA |
| 726 | 196.48 | humidity | 70 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 756 | 196.60 | temperature | 20 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 760 | 196.60 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 18 |
| 795 | 196.69 | radiation | 30 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 800 | 196.72 | wind | 9 | 14400 | > th | dose independent | rect. | 4 | 9 |
| 855 | 196.80 | temperature | 15 | 270 | > th | dose dependent | rect. | 18 | 21 |
| 860 | 196.84 | temperature | 15 | 14400 | > th | dose independent | rect. | 2 | 1 |
| 900 | 196.90 | radiation | 1 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 928 | 196.97 | temperature | 20 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 929 | 196.97 | radiation | 10 | 4320 | < th | dose independent | rect. | 15 | 2 |
| 957 | 197.00 | temperature | 20 | 14400 | < th | dose dependent | rect. | 12 | 14 |
| 976 | 197.02 | temperature | 30 | 90 | < th | dose dependent | rect. | 1 | 20 |
| 990 | 197.05 | humidity | 70 | 43200 | > th | dose independent | rect. | 19 | 14 |
| 993 | 197.06 | temperature | 20 | 14400 | < th | dose independent | rect. | 1 | 1 |