BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0936800 Os01g0936800|AK103322
(380 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0936800 PapD-like domain containing protein 705 0.0
Os05g0373000 Major sperm protein domain containing protein 330 1e-90
Os08g0155100 Major sperm protein domain containing protein 166 2e-41
Os08g0156700 Similar to VAP27 165 5e-41
Os04g0534400 Major sperm protein domain containing protein 159 3e-39
Os02g0643000 Similar to VAP27 151 8e-37
Os04g0554200 Major sperm protein domain containing protein 140 1e-33
Os10g0507600 Major sperm protein domain containing protein 137 1e-32
Os10g0549100 Major sperm protein domain containing protein 127 2e-29
Os02g0661900 Similar to Vesicle-associated membrane protein... 110 3e-24
Os02g0652550 Major sperm protein domain containing protein 106 3e-23
Os11g0274300 Protein kinase-like domain containing protein 98 1e-20
Os10g0200000 Protein kinase-like domain containing protein 80 3e-15
AK109135 72 6e-13
Os04g0369000 Major sperm protein domain containing protein 70 2e-12
>Os01g0936800 PapD-like domain containing protein
Length = 380
Score = 705 bits (1819), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/368 (96%), Positives = 354/368 (96%)
Query: 1 MGQDLAEIHPRELQFTFEVKKQSSCTVHLVNKSNEYVAFKVKTTSPKRYCVRPNTGVILP 60
MGQDLAEIHPRELQFTFEVKKQSSCTVHLVNKSNEYVAFKVKTTSPKRYCVRPNTGVILP
Sbjct: 1 MGQDLAEIHPRELQFTFEVKKQSSCTVHLVNKSNEYVAFKVKTTSPKRYCVRPNTGVILP 60
Query: 61 RSTCDFTVTMQAQRTAPPDMQLKDKFLVQTTVVPYGTSDEDLVPSYFSKESGRYIEESKL 120
RSTCDFTVTMQAQRTAPPDMQLKDKFLVQTTVVPYGTSDEDLVPSYFSKESGRYIEESKL
Sbjct: 61 RSTCDFTVTMQAQRTAPPDMQLKDKFLVQTTVVPYGTSDEDLVPSYFSKESGRYIEESKL 120
Query: 121 RVVLVSASHPFGEQPINGIPNTEAAVEVPSLKDTLNIKNEIPVAEKEVHSPLEEDPVVIP 180
RVVLVSASHPFGEQPINGIPNTEAAVEVPSLKDTLNIKNEIPVAEKEVHSPLEEDPVVIP
Sbjct: 121 RVVLVSASHPFGEQPINGIPNTEAAVEVPSLKDTLNIKNEIPVAEKEVHSPLEEDPVVIP 180
Query: 181 APPYPVKEAPILREVPVHISPVRETSFLREVPAPVSPVKETPILREVPTPLKETPVILXX 240
APPYPVKEAPILREVPVHISPVRETSFLREVPAPVSPVKETPILREVPTPLKETPVIL
Sbjct: 181 APPYPVKEAPILREVPVHISPVRETSFLREVPAPVSPVKETPILREVPTPLKETPVILTE 240
Query: 241 XXXXXXXXXXXXVESLHPFEQNLASLKESPLEETLPKAAVVLSEQGAVNVQSRQLCHVTE 300
VESLHPFEQNLASLKESPLEETLPKAAVVLSEQGAVNVQSRQLCHVTE
Sbjct: 241 SPPPPTDTSSITVESLHPFEQNLASLKESPLEETLPKAAVVLSEQGAVNVQSRQLCHVTE 300
Query: 301 DVQNLKSKLNGLEVKLEEAEKMIIKLREESRTTTQERDKLQQEMMFLRKKGTPRNQVGFP 360
DVQNLKSKLNGLEVKLEEAEKMIIKLREESRTTTQERDKLQQEMMFLRKKGTPRNQVGFP
Sbjct: 301 DVQNLKSKLNGLEVKLEEAEKMIIKLREESRTTTQERDKLQQEMMFLRKKGTPRNQVGFP 360
Query: 361 LLFVVYVA 368
LLFVVYVA
Sbjct: 361 LLFVVYVA 368
>Os05g0373000 Major sperm protein domain containing protein
Length = 477
Score = 330 bits (845), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 213/461 (46%), Positives = 262/461 (56%), Gaps = 100/461 (21%)
Query: 5 LAEIHPRELQFTFEVKKQSSCTVHLVNKSNEYVAFKVKTTSPKRYCVRPNTGVILPRSTC 64
L EIHP E++F FEVKK+SSC V LVNKS EYVAFKVKTTSPKRYCVRPN GVILPR+TC
Sbjct: 8 LVEIHPGEIRFEFEVKKKSSCYVCLVNKSEEYVAFKVKTTSPKRYCVRPNVGVILPRATC 67
Query: 65 DFTVTMQAQRTAPPDMQLKDKFLVQTTVVPYGTSDEDLVPSYFSKESGRYIEESKLRVVL 124
FTV MQAQ APPD+Q++DKFLVQTTVVP+GT+DED+ P++FSKE GRYIEE+KLRVVL
Sbjct: 68 VFTVIMQAQMIAPPDLQIRDKFLVQTTVVPFGTADEDIAPAFFSKEVGRYIEENKLRVVL 127
Query: 125 VSASHPFGEQPINGIPNTEAAVEVPSLKDTLNIKNEIPVAEKEVHS-------PLEEDPV 177
VSA+ +Q I G+P+ + VEV K+TLNI++E EVH PL E+P
Sbjct: 128 VSATQLEEQQLIAGVPSAKTGVEVRVAKETLNIESEASNVMNEVHHSLKTNFPPLRENPA 187
Query: 178 VIPAPPYPVKEAPIL---REVP-----------------------VHIS------PVRET 205
+ P+PVK+ IL +EVP VH S P+RE
Sbjct: 188 TLNEMPFPVKQTTILAPSKEVPAISAESAHHWKETPAESLFSSNAVHHSLKTSFPPLREN 247
Query: 206 -SFLREVPAPVSPV--------------------KETP---------------------- 222
+ L E+P PV KETP
Sbjct: 248 PATLNEMPFPVKQTTILPPSEEVPAISAESGHHWKETPAESLFATNALPHSLKTSCLLRE 307
Query: 223 ---ILREVPT---------PLKETPVILXXXXXXXXXXXXXXVES-LHPFEQNLASLKES 269
IL E+P PLKE PVI +ES E N+ S E
Sbjct: 308 NPAILNEIPFPVRQTTILPPLKEVPVISAESAHHWKETLNVSLESHFSSTETNVVS-SEC 366
Query: 270 P--LEETLPKAAVVLSEQGAVNVQSRQLCHVTEDVQNLKSKLNGLEVKLEEAEKMIIKLR 327
P LE T P + VN ++ L +VT+DVQNL +KL+ LE KLEEAE +I+KLR
Sbjct: 367 PETLENTSPSKEFAILRDTLVNAEN--LHYVTDDVQNLMTKLSNLEAKLEEAESVIVKLR 424
Query: 328 EESRTTTQERDKLQQEMMFLRKKGTPRNQVGFPLLFVVYVA 368
E++RTT +ERDKL+ EM+ L +KG R+Q GFPLLFVVY+A
Sbjct: 425 EDTRTTIRERDKLKHEMVVLTRKGASRSQAGFPLLFVVYMA 465
>Os08g0155100 Major sperm protein domain containing protein
Length = 237
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 83/157 (52%), Positives = 104/157 (66%), Gaps = 17/157 (10%)
Query: 1 MGQDLAEIHPRELQFTFEVKKQSSCTVHLVNKSNEYVAFKVKTTSPKRYCVRPNTGVILP 60
M EI P EL F FE+ KQSSC++ L NK++ YVAFKVKTT+PK+YCVRPN GV+LP
Sbjct: 1 MSASFLEIQPSELSFPFELLKQSSCSMQLTNKTDHYVAFKVKTTNPKQYCVRPNIGVVLP 60
Query: 61 RSTCDFTVTMQAQRTAPPDMQLKDKFLVQTTVVPYGTSDEDLVPSYFSKESGRYIEESKL 120
STCD TVTMQAQR APPDMQ KDKFLVQ+ G + +D+ F+K +G+ +EE KL
Sbjct: 61 GSTCDVTVTMQAQREAPPDMQCKDKFLVQSVAAENGATTQDISAEMFNKVAGKVVEEFKL 120
Query: 121 RVVLV---------------SASHPFGEQPINGIPNT 142
RVV V S++ PF ++ NGI N+
Sbjct: 121 RVVYVPTTTSSAMPEDSEQGSSARPFAQE--NGIHNS 155
>Os08g0156700 Similar to VAP27
Length = 243
Score = 165 bits (418), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 76/123 (61%), Positives = 95/123 (77%)
Query: 4 DLAEIHPRELQFTFEVKKQSSCTVHLVNKSNEYVAFKVKTTSPKRYCVRPNTGVILPRST 63
+L I P EL+F FE+KKQ SC++ L N S++Y+AFKVKTTSPK+Y VRPNTGV+LPRST
Sbjct: 11 ELLRIDPVELRFPFELKKQISCSMQLSNLSDDYIAFKVKTTSPKKYSVRPNTGVVLPRST 70
Query: 64 CDFTVTMQAQRTAPPDMQLKDKFLVQTTVVPYGTSDEDLVPSYFSKESGRYIEESKLRVV 123
CD VTMQAQR APPDMQ KDKFLVQ+ + P G + +D+ F+KESG +EE KLRV
Sbjct: 71 CDVVVTMQAQREAPPDMQCKDKFLVQSVIAPSGVTVKDITGEMFTKESGNKVEEVKLRVT 130
Query: 124 LVS 126
++
Sbjct: 131 YIA 133
>Os04g0534400 Major sperm protein domain containing protein
Length = 250
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 76/133 (57%), Positives = 97/133 (72%), Gaps = 3/133 (2%)
Query: 1 MGQDLAE---IHPRELQFTFEVKKQSSCTVHLVNKSNEYVAFKVKTTSPKRYCVRPNTGV 57
MG D E I P EL+F+FE KKQ SC++ L N++++Y+AFKVKTTSPK+YCVRPN+G+
Sbjct: 1 MGSDSKELLGIEPLELRFSFETKKQISCSMQLTNRTDDYIAFKVKTTSPKKYCVRPNSGI 60
Query: 58 ILPRSTCDFTVTMQAQRTAPPDMQLKDKFLVQTTVVPYGTSDEDLVPSYFSKESGRYIEE 117
+ PRST D VTMQAQR AP DMQ KDKFLVQ+ VV GT+ +D+ F+K SG ++E
Sbjct: 61 VPPRSTSDVIVTMQAQREAPADMQCKDKFLVQSVVVTEGTTTKDVTGEMFNKGSGNVVDE 120
Query: 118 SKLRVVLVSASHP 130
KL+VV V P
Sbjct: 121 RKLKVVYVQPPRP 133
>Os02g0643000 Similar to VAP27
Length = 259
Score = 151 bits (381), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 71/121 (58%), Positives = 92/121 (76%)
Query: 3 QDLAEIHPRELQFTFEVKKQSSCTVHLVNKSNEYVAFKVKTTSPKRYCVRPNTGVILPRS 62
++L I P EL F FE+KKQ SC++HL NK++EYV FKVKTTSPK+YCVRPN G++ P+S
Sbjct: 40 RELLGIDPPELIFPFELKKQISCSLHLTNKTDEYVTFKVKTTSPKKYCVRPNNGIVAPQS 99
Query: 63 TCDFTVTMQAQRTAPPDMQLKDKFLVQTTVVPYGTSDEDLVPSYFSKESGRYIEESKLRV 122
T + VTMQAQR APPDMQ KDKFLVQ+ +V + +D+ F+KESG ++E KL+V
Sbjct: 100 TSNVLVTMQAQREAPPDMQCKDKFLVQSAIVTQELTPKDITGDMFTKESGNVVDEVKLKV 159
Query: 123 V 123
V
Sbjct: 160 V 160
>Os04g0554200 Major sperm protein domain containing protein
Length = 244
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 68/130 (52%), Positives = 87/130 (66%)
Query: 1 MGQDLAEIHPRELQFTFEVKKQSSCTVHLVNKSNEYVAFKVKTTSPKRYCVRPNTGVILP 60
M L +HP EL+ +E K++ SC + L NK+N+YVAFKVKTT+P++Y VR G++ P
Sbjct: 1 MSNTLLRVHPSELKIPYEYKRKRSCCMQLTNKTNQYVAFKVKTTNPRKYSVRHACGILPP 60
Query: 61 RSTCDFTVTMQAQRTAPPDMQLKDKFLVQTTVVPYGTSDEDLVPSYFSKESGRYIEESKL 120
RS+CD TVTMQA D KDKFLVQ+ V YG + D VP F+K GR IEE KL
Sbjct: 61 RSSCDITVTMQAPVEMLSDYHCKDKFLVQSVAVGYGATMRDFVPELFTKAPGRVIEEFKL 120
Query: 121 RVVLVSASHP 130
RVV V+A+ P
Sbjct: 121 RVVYVAANPP 130
>Os10g0507600 Major sperm protein domain containing protein
Length = 240
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/130 (53%), Positives = 85/130 (65%)
Query: 4 DLAEIHPRELQFTFEVKKQSSCTVHLVNKSNEYVAFKVKTTSPKRYCVRPNTGVILPRST 63
DL ++ P ELQF FE+ KQ SC + + NK+ VAFKVKTTSPK+YCVRPN GV+ PRS
Sbjct: 6 DLVDVDPPELQFPFELDKQISCPLRIANKTERTVAFKVKTTSPKKYCVRPNNGVVRPRSA 65
Query: 64 CDFTVTMQAQRTAPPDMQLKDKFLVQTTVVPYGTSDEDLVPSYFSKESGRYIEESKLRVV 123
VTMQAQ APPD+Q KDKFLVQ+ VV G S +D+ F ++ +EE KL+V
Sbjct: 66 SVVVVTMQAQIVAPPDLQCKDKFLVQSVVVDDGLSAKDITSQMFLRDENNMVEEVKLKVS 125
Query: 124 LVSASHPFGE 133
V P E
Sbjct: 126 YVMPPEPAME 135
>Os10g0549100 Major sperm protein domain containing protein
Length = 233
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/135 (47%), Positives = 88/135 (65%), Gaps = 3/135 (2%)
Query: 5 LAEIHPRELQFTFEVKKQSSCTVHLVNKSNEYVAFKVKTTSPKRYCVRPNTGVILPRSTC 64
L I+P +L F FE+ K C + +VN S +VAFKVKTTSP++Y VRPN +I P +C
Sbjct: 7 LISIYPEDLTFLFELDKPCYCNLKVVNNSEHHVAFKVKTTSPRKYFVRPNASIIQPWDSC 66
Query: 65 DFTVTMQAQRTAPPDMQLKDKFLVQTTVVPYGTSDEDLVPSYFSKESGRYIEESKLRVVL 124
T+T+QAQ+ PPDMQ KDKFL+Q+T V T +++ P+ F+KE + IEE KL+VV
Sbjct: 67 TITITLQAQKEYPPDMQCKDKFLIQSTKVAASTDMDEIPPNTFNKEVDKVIEEMKLKVVY 126
Query: 125 VSASHPFGEQPINGI 139
+ P G +GI
Sbjct: 127 ---TVPSGSSDDSGI 138
>Os02g0661900 Similar to Vesicle-associated membrane protein-associated protein
B/C (VAMP- associated protein B/C) (VAMP-B/VAMP-C)
(VAP-B/VAP-C). Splice isoform 2
Length = 106
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 72/102 (70%)
Query: 1 MGQDLAEIHPRELQFTFEVKKQSSCTVHLVNKSNEYVAFKVKTTSPKRYCVRPNTGVILP 60
M L I+P EL+ FE+K+Q+S + L NK++ +VAFKVKTT+P++Y VRP TG++LP
Sbjct: 1 MSNTLLRIYPSELKIPFELKRQNSGILELTNKTDHHVAFKVKTTNPRKYSVRPTTGIVLP 60
Query: 61 RSTCDFTVTMQAQRTAPPDMQLKDKFLVQTTVVPYGTSDEDL 102
R +C T++MQ + P D KDKFL+Q+ VV GT+ +D+
Sbjct: 61 RGSCGITISMQPPKEIPTDYNCKDKFLIQSVVVEDGTTQKDI 102
>Os02g0652550 Major sperm protein domain containing protein
Length = 120
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 50/103 (48%), Positives = 69/103 (66%), Gaps = 1/103 (0%)
Query: 2 GQDLAEIHPRELQFTFEVKKQSSCTVHLVNKSNEYVAFKVKTTSPKRYCVRPNTGVILPR 61
G L I+P +L F FE+ K C + +VN S +VAFKVKTTSP++Y VRPN ++ P
Sbjct: 4 GGTLISIYPEDLTFLFELDKPCYCNLKVVNNSEHHVAFKVKTTSPRKYFVRPNANIVQPW 63
Query: 62 STCDFTVTMQAQRTAPPDMQLKDKFLVQTTVVPYGTSDEDLVP 104
+C T+T+QAQ+ P DMQ KDKFL+Q+T V ++D D +P
Sbjct: 64 DSCTITITLQAQKEYPQDMQCKDKFLIQSTRVA-ASTDMDEIP 105
>Os11g0274300 Protein kinase-like domain containing protein
Length = 693
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/118 (44%), Positives = 72/118 (61%), Gaps = 3/118 (2%)
Query: 11 RELQFTFEVKKQSSCTVHLVNKSNEYVAFKVKTTSPKRYCVRPNTGVILPRSTCDFTVTM 70
REL+F FEVKK SC + L N+++ ++AF K K+Y +PN G I P S+C TVTM
Sbjct: 571 RELRFPFEVKKDISCCLQLTNQTDYFIAFNTKANQ-KKYSTQPNKGTIAPWSSCYVTVTM 629
Query: 71 QAQRTAPPDMQLKDKFLVQTTVVPYGT--SDEDLVPSYFSKESGRYIEESKLRVVLVS 126
+AQ TAPP +Q D F+VQ+T V ED+ F K G+ ++E KL +V V+
Sbjct: 630 KAQETAPPYLQCHDMFVVQSTRVNEDLEPETEDITEELFKKTMGKVVDEEKLPIVYVA 687
>Os10g0200000 Protein kinase-like domain containing protein
Length = 478
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 70/115 (60%), Gaps = 6/115 (5%)
Query: 3 QDLAEIHPRELQFTFEVKKQSSCTVHLVNKSNEYVAFKVKTTSPKRYCVRPNTGVILPRS 62
+++ ++P EL F + +++ SC++ L NK++ YVA+K+ Y + P +G+I P+
Sbjct: 351 KEILSVNPLELWFPMKAQEEFSCSMLLKNKTHHYVAYKINAQKLNIYRIEPCSGLISPQF 410
Query: 63 TCDFTVTMQAQRTAPPDMQLKDKFLVQTTVVPYGTSDE--DLVPSYFSKESGRYI 115
TC+ +V MQAQ+ P+MQL D+ LVQ+ VV SD+ D+ K+ G+ +
Sbjct: 411 TCNISVRMQAQQGVSPNMQLMDRILVQSVVV----SDDLIDIAKDLSCKQKGKLV 461
>AK109135
Length = 294
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 66/118 (55%), Gaps = 3/118 (2%)
Query: 7 EIHPRELQFTFEVKKQSSCTVHLVNKSNEYVAFKVKTTSPKRYCVRPNTGVILPRSTCDF 66
+I P +L F K + ++ L N S E +++KVKTT+PKRYCV+PNTG I P + +
Sbjct: 7 KISPADLVFLPPFTKPINNSIKLTNTSTEALSYKVKTTAPKRYCVKPNTGTISPNESVEV 66
Query: 67 TVTMQAQRTAPPDMQLKDKFLVQTTVVPYGTSDEDLVPSYFSKESGRYIEESKLRVVL 124
T+T+ + P + ++ DKF +Q V T+D + S KE + + KLR L
Sbjct: 67 TITLNFTKDPPANPKVADKFQIQCIPVTDTTADLKTLWSRVPKEQ---VLKYKLRCYL 121
>Os04g0369000 Major sperm protein domain containing protein
Length = 137
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 8 IHPRELQFTFEVKKQSSCTVHLVNKSNEYVAFKVKTTSPKRYCVRPNTGVILPRSTCDFT 67
I P E++F FE + SC + L N+S + VAF V+ K Y P+ GV+ PRS
Sbjct: 13 IDPLEVRFPFEKDRDVSCVLQLTNRSADRVAFAVQVDESK-YRAVPDRGVVQPRSRRYIV 71
Query: 68 VTMQAQRTAPPDMQLKDKFLVQTTVVPYGTSDEDLVPSYFSKESGRYIEESKLRVVLVSA 127
T +AQ +AP ++Q D FL+++ V G++D+D F K G+ ++ +R+ +V
Sbjct: 72 ATSRAQASAPTNLQRDDSFLLRSKRVE-GSADDDFAED-FEKLMGKAVDGETMRLPVVYI 129
Query: 128 SHPF 131
+ P
Sbjct: 130 ALPL 133
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.314 0.131 0.368
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 12,079,537
Number of extensions: 537094
Number of successful extensions: 1826
Number of sequences better than 1.0e-10: 15
Number of HSP's gapped: 1815
Number of HSP's successfully gapped: 16
Length of query: 380
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 277
Effective length of database: 11,657,759
Effective search space: 3229199243
Effective search space used: 3229199243
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 157 (65.1 bits)