BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0899800 Os01g0899800|015-064-C09
(343 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0899800 Pathogenesis-related transcriptional factor an... 409 e-114
Os06g0657500 Similar to ANT (Ovule development protein aint... 197 1e-50
Os04g0653600 Similar to AINTEGUMENTA-like protein 192 4e-49
Os03g0232200 Similar to BABY BOOM 182 2e-46
Os07g0124700 Similar to PLETHORA1 182 4e-46
Os02g0614300 Similar to ANT-like protein 177 7e-45
Os03g0313100 Similar to ANT-like protein 152 3e-37
Os05g0536250 142 3e-34
Os09g0423800 Similar to AP2-1 protein (Fragment) 141 8e-34
Os06g0145700 138 5e-33
Os12g0126300 Similar to AP2-1 protein (Fragment) 138 6e-33
Os08g0442400 Similar to BABY BOOM 134 1e-31
Os01g0813300 133 1e-31
Os07g0235800 Pathogenesis-related transcriptional factor an... 107 1e-23
Os03g0818800 Similar to Floral homeotic protein 91 9e-19
Os11g0295900 Similar to AP2/EREBP transcription factor BABY... 75 9e-14
Os05g0121600 Similar to AP2 domain containing protein RAP2.... 66 3e-11
>Os01g0899800 Pathogenesis-related transcriptional factor and ERF domain
containing protein
Length = 343
Score = 409 bits (1050), Expect = e-114, Method: Compositional matrix adjust.
Identities = 217/343 (63%), Positives = 217/343 (63%)
Query: 1 YEKELEEMKHMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLY 60
YEKELEEMKHMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLY
Sbjct: 1 YEKELEEMKHMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLY 60
Query: 61 LGTFSTQXXXXXXYDIAAIKFRGLNAVTNFDMSRYDVKSILDSAALPVGTXXXXXXXXXX 120
LGTFSTQ YDIAAIKFRGLNAVTNFDMSRYDVKSILDSAALPVGT
Sbjct: 61 LGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKSILDSAALPVGTAAKRLKDAEA 120
Query: 121 XXXYDVGRIASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLYHPYAQPL 180
YDVGRIAS GLYHPYAQPL
Sbjct: 121 AAAYDVGRIASHLGGDGAYAAHYGHHHHSAAAAWPTIAFQAAAAPPPHAAGLYHPYAQPL 180
Query: 181 RGWCKQEQDHAVIAAAHSLQDLHHLNLGXXXXXHDFFSQAMQQQHGLGSIDNASLEHSTX 240
RGWCKQEQDHAVIAAAHSLQDLHHLNLG HDFFSQAMQQQHGLGSIDNASLEHST
Sbjct: 181 RGWCKQEQDHAVIAAAHSLQDLHHLNLGAAAAAHDFFSQAMQQQHGLGSIDNASLEHSTG 240
Query: 241 XXXXXXXXXXXXXXXXXIMAPMXXXXXXXXXXXXXHDHGGDGGKQVQMGYDSYLVXXXXX 300
IMAPM HDHGGDGGKQVQMGYDSYLV
Sbjct: 241 SNSVVYNGDNGGGGGGYIMAPMSAVSATATAVASSHDHGGDGGKQVQMGYDSYLVGADAY 300
Query: 301 XXXXXXRXXXXXXXXXXXXXXXXXXXXXGVCHGAQLFSVWNDT 343
R GVCHGAQLFSVWNDT
Sbjct: 301 GGGGAGRMPSWAMTPASAPAATSSSDMTGVCHGAQLFSVWNDT 343
>Os06g0657500 Similar to ANT (Ovule development protein aintegumenta)
Length = 469
Score = 197 bits (500), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 96/109 (88%), Positives = 98/109 (89%), Gaps = 1/109 (0%)
Query: 1 YEKELEEMKHMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLY 60
YE ELEEMK MTRQEF+ASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLY
Sbjct: 200 YETELEEMKSMTRQEFIASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLY 259
Query: 61 LGTFSTQXXXXXXYDIAAIKFRGLNAVTNFDMSRYDVKSILDSAALPVG 109
LGTFSTQ YDIAAIKFRGLNAVTNFDMSRYDV SIL+S LPVG
Sbjct: 260 LGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVDSILNS-DLPVG 307
>Os04g0653600 Similar to AINTEGUMENTA-like protein
Length = 495
Score = 192 bits (487), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 91/110 (82%), Positives = 100/110 (90%), Gaps = 1/110 (0%)
Query: 1 YEKELEEMKHMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLY 60
YEKELEEMKHMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLY
Sbjct: 214 YEKELEEMKHMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLY 273
Query: 61 LGTFSTQXXXXXXYDIAAIKFRGLNAVTNFDMSRYDVKSILDSAALPVGT 110
LGTF T+ YDIAAIKFRGLNAVTNF++ RY+V+SI+ S+ LP+G+
Sbjct: 274 LGTFGTEEEAAEAYDIAAIKFRGLNAVTNFEIGRYNVESII-SSNLPIGS 322
>Os03g0232200 Similar to BABY BOOM
Length = 642
Score = 182 bits (463), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 84/106 (79%), Positives = 94/106 (88%)
Query: 1 YEKELEEMKHMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLY 60
Y E+EEM+ MTRQE+VA LRR+SSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLY
Sbjct: 361 YRDEIEEMERMTRQEYVAHLRRRSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLY 420
Query: 61 LGTFSTQXXXXXXYDIAAIKFRGLNAVTNFDMSRYDVKSILDSAAL 106
LGTFSTQ YDIAAIKFRGLNAVTNFD++RYDV I++S++L
Sbjct: 421 LGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDITRYDVDKIMESSSL 466
>Os07g0124700 Similar to PLETHORA1
Length = 331
Score = 182 bits (461), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 84/106 (79%), Positives = 94/106 (88%)
Query: 1 YEKELEEMKHMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLY 60
Y++ELEEMK+MTRQE+VA LRRKSSGFSRGAS+YRGVTRHHQHGRWQARIGRV+GNKDLY
Sbjct: 47 YQEELEEMKNMTRQEYVAHLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVSGNKDLY 106
Query: 61 LGTFSTQXXXXXXYDIAAIKFRGLNAVTNFDMSRYDVKSILDSAAL 106
LGTFSTQ YD+AAIKFRGLNAVTNFD++RYDV I+ S L
Sbjct: 107 LGTFSTQEEAAEAYDVAAIKFRGLNAVTNFDITRYDVDKIMASNTL 152
>Os02g0614300 Similar to ANT-like protein
Length = 321
Score = 177 bits (450), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 84/99 (84%), Positives = 89/99 (89%)
Query: 11 MTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQXXX 70
MTRQE++A LRR SSGFSRGAS YRGVTRHHQHGRWQARIGRVAGNKDLYLGTFST+
Sbjct: 1 MTRQEYIAYLRRNSSGFSRGASKYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEA 60
Query: 71 XXXYDIAAIKFRGLNAVTNFDMSRYDVKSILDSAALPVG 109
YDIAAIKFRGLNAVTNFDMSRYDVKSIL+S+ LPVG
Sbjct: 61 AEAYDIAAIKFRGLNAVTNFDMSRYDVKSILESSTLPVG 99
>Os03g0313100 Similar to ANT-like protein
Length = 431
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 79/108 (73%), Positives = 93/108 (86%), Gaps = 1/108 (0%)
Query: 1 YEKELEEMKHMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLY 60
Y KE+EEM+ M++QE VASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLY
Sbjct: 204 YVKEIEEMQKMSKQELVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLY 263
Query: 61 LGTFSTQXXXXXXYDIAAIKFRGLNAVTNFDMSRYDVKSILDSAALPV 108
LGTF+T+ YD+AA+KFRG NAVTNF+ SRY++++I S LP+
Sbjct: 264 LGTFATEEEAAEAYDVAALKFRGANAVTNFEPSRYNLEAISQS-DLPI 310
>Os05g0536250
Length = 431
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 65/95 (68%), Positives = 81/95 (85%)
Query: 1 YEKELEEMKHMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLY 60
YEKEL+ M+++T++E++ASLRRKSSGFSRG S YRGV RHHQ+GRW+ARIGRV GNK LY
Sbjct: 160 YEKELKIMENLTKEEYLASLRRKSSGFSRGVSKYRGVARHHQNGRWEARIGRVFGNKYLY 219
Query: 61 LGTFSTQXXXXXXYDIAAIKFRGLNAVTNFDMSRY 95
LGT+STQ YDIAAI+++G+NAVTNFD+ Y
Sbjct: 220 LGTYSTQEEAARAYDIAAIEYKGVNAVTNFDLRSY 254
>Os09g0423800 Similar to AP2-1 protein (Fragment)
Length = 365
Score = 141 bits (355), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 65/95 (68%), Positives = 79/95 (83%)
Query: 1 YEKELEEMKHMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLY 60
YE EL+EM+ +R+E++ SLRRKSSGFSRG S YRGV RHH +GRW+ARIGRV GNK LY
Sbjct: 103 YEGELKEMEGQSREEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLY 162
Query: 61 LGTFSTQXXXXXXYDIAAIKFRGLNAVTNFDMSRY 95
LGT++TQ YD+AAI++RGLNAVTNFD+SRY
Sbjct: 163 LGTYATQEEAAMAYDMAAIEYRGLNAVTNFDLSRY 197
>Os06g0145700
Length = 399
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 63/95 (66%), Positives = 80/95 (84%)
Query: 1 YEKELEEMKHMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLY 60
YEKEL+ M+ ++++E++AS+RRKS+GFSRG S YRGV RHH +GRW+ARIGRV GNK LY
Sbjct: 151 YEKELKLMQGVSKEEYLASIRRKSNGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLY 210
Query: 61 LGTFSTQXXXXXXYDIAAIKFRGLNAVTNFDMSRY 95
LGT+STQ YDIAAI++RG+NAVTNFD+S Y
Sbjct: 211 LGTYSTQEEAARAYDIAAIEYRGINAVTNFDLSTY 245
>Os12g0126300 Similar to AP2-1 protein (Fragment)
Length = 443
Score = 138 bits (347), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 64/95 (67%), Positives = 77/95 (81%)
Query: 1 YEKELEEMKHMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLY 60
YEKE EM+ ++R+E++ASLRR+SSGFSRG S YRGV RHH +GRW+ARIGRV GNK LY
Sbjct: 148 YEKERSEMEGVSREEYLASLRRRSSGFSRGVSKYRGVARHHHNGRWEARIGRVLGNKYLY 207
Query: 61 LGTFSTQXXXXXXYDIAAIKFRGLNAVTNFDMSRY 95
LGTF TQ YD+AAI++RG NAVTNFD+S Y
Sbjct: 208 LGTFDTQEEAAKAYDLAAIEYRGANAVTNFDISCY 242
>Os08g0442400 Similar to BABY BOOM
Length = 419
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 62/95 (65%), Positives = 78/95 (82%)
Query: 1 YEKELEEMKHMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLY 60
Y++EL+EM+ +R+E++ SLRRKSSGFSRG S YRGV RHH +G+W+ARIGRV GNK LY
Sbjct: 125 YDEELKEMEGQSREEYIGSLRRKSSGFSRGVSKYRGVARHHHNGKWEARIGRVFGNKYLY 184
Query: 61 LGTFSTQXXXXXXYDIAAIKFRGLNAVTNFDMSRY 95
LGT++TQ YDIAAI+ RGLNAVTNFD++ Y
Sbjct: 185 LGTYATQEEAAVAYDIAAIEHRGLNAVTNFDINLY 219
>Os01g0813300
Length = 426
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 62/95 (65%), Positives = 73/95 (76%)
Query: 1 YEKELEEMKHMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLY 60
Y KELE M+ MTR+E++A+LRRKSSGFSRG S YRGV +HH +GRW+ARIGR G K LY
Sbjct: 146 YRKELERMQRMTREEYLATLRRKSSGFSRGVSKYRGVAKHHHNGRWEARIGRAVGKKYLY 205
Query: 61 LGTFSTQXXXXXXYDIAAIKFRGLNAVTNFDMSRY 95
LGTF TQ YD+AAI+ RG +AVTNFD S Y
Sbjct: 206 LGTFDTQEEAATAYDLAAIQLRGRSAVTNFDASCY 240
>Os07g0235800 Pathogenesis-related transcriptional factor and ERF domain
containing protein
Length = 436
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 51/96 (53%), Positives = 71/96 (73%), Gaps = 1/96 (1%)
Query: 1 YEKELEEMKHMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLY 60
YE +L++M++ T++EFV LRR+S+GF+RG+S YRGVT H + GRW+AR+G++ G K +Y
Sbjct: 182 YEDDLKQMRNWTKEEFVHILRRQSTGFARGSSKYRGVTLH-KCGRWEARMGQLLGKKYIY 240
Query: 61 LGTFSTQXXXXXXYDIAAIKFRGLNAVTNFDMSRYD 96
LG F ++ YD AAI+F G AVTNFD S YD
Sbjct: 241 LGLFDSEIEAARAYDRAAIRFNGREAVTNFDPSSYD 276
>Os03g0818800 Similar to Floral homeotic protein
Length = 446
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 76/134 (56%), Gaps = 32/134 (23%)
Query: 1 YEKELEEMKHMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLY 60
YE +L++M++ T++EFV LRR+S+GF+RG+S +RGVT H+ GRW+AR+G++ G K +Y
Sbjct: 159 YEDDLKQMRNWTKEEFVHILRRQSTGFARGSSKFRGVT-LHKCGRWEARMGQLLGKKYIY 217
Query: 61 LGTFSTQXXXX-------------------------------XXYDIAAIKFRGLNAVTN 89
LG F T+ YD AAI+F G AVTN
Sbjct: 218 LGLFDTEVEAARYYSFDEVTCMTSHELPGFSLTFDSCLVEFGRAYDRAAIRFNGREAVTN 277
Query: 90 FDMSRYDVKSILDS 103
F+ + Y+V ++ D+
Sbjct: 278 FEPASYNVDALPDA 291
>Os11g0295900 Similar to AP2/EREBP transcription factor BABY BOOM1
Length = 263
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 34/45 (75%), Positives = 38/45 (84%)
Query: 66 TQXXXXXXYDIAAIKFRGLNAVTNFDMSRYDVKSILDSAALPVGT 110
TQ YDIAAIKFRGLNAVTNFDMSRYDVKSI++S+ LP+GT
Sbjct: 7 TQEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKSIIESSNLPIGT 51
>Os05g0121600 Similar to AP2 domain containing protein RAP2.7 (Fragment)
Length = 130
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 46/57 (80%), Gaps = 1/57 (1%)
Query: 1 YEKELEEMKHMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNK 57
YE+++ +MK ++++EFV LRR+S+GFSRG+S YRGVT H+ GRW+AR+G+ G K
Sbjct: 75 YEEDMRQMKSLSKEEFVHVLRRQSTGFSRGSSKYRGVT-LHKCGRWEARMGQFLGKK 130
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.135 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 7,323,238
Number of extensions: 196150
Number of successful extensions: 527
Number of sequences better than 1.0e-10: 17
Number of HSP's gapped: 525
Number of HSP's successfully gapped: 18
Length of query: 343
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 241
Effective length of database: 11,709,973
Effective search space: 2822103493
Effective search space used: 2822103493
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 156 (64.7 bits)