BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0736900 Os01g0736900|AK121245
(253 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0736900 Reticulon family protein 445 e-125
Os05g0526400 Reticulon family protein 388 e-108
Os01g0226300 Reticulon family protein 277 4e-75
Os02g0265900 Reticulon family protein 262 2e-70
Os06g0503400 Reticulon family protein 250 7e-67
Os05g0312500 Reticulon family protein 235 2e-62
Os05g0550100 215 2e-56
Os03g0781700 Reticulon family protein 214 6e-56
Os07g0142000 Reticulon family protein 199 2e-51
Os01g0139000 Reticulon family protein 169 2e-42
Os01g0691400 Reticulon family protein 129 2e-30
Os01g0851300 Reticulon family protein 125 3e-29
Os03g0336600 Reticulon family protein 122 2e-28
Os04g0367400 Reticulon family protein 100 8e-22
Os04g0670000 Reticulon family protein 96 3e-20
>Os01g0736900 Reticulon family protein
Length = 253
Score = 445 bits (1144), Expect = e-125, Method: Compositional matrix adjust.
Identities = 225/253 (88%), Positives = 225/253 (88%)
Query: 1 MAEHKEEQSVMEKLSEKLHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXIYRLFGRERPVH 60
MAEHKEEQSVMEKLSEKLHG IYRLFGRERPVH
Sbjct: 1 MAEHKEEQSVMEKLSEKLHGDSSSSSSDSDDDKKGSSSSSAAAAMKAKIYRLFGRERPVH 60
Query: 61 SVLGGGKPADLVLWRNKKISGGVLAGATAIWLLFEIMEYHLLTLVCHCLILSLAVLFLWS 120
SVLGGGKPADLVLWRNKKISGGVLAGATAIWLLFEIMEYHLLTLVCHCLILSLAVLFLWS
Sbjct: 61 SVLGGGKPADLVLWRNKKISGGVLAGATAIWLLFEIMEYHLLTLVCHCLILSLAVLFLWS 120
Query: 121 NASTFIHKSPPNIPEVKIPEDLTVNIALSLRYEINRGFATLREIGHGRDLKKFLIVIAGL 180
NASTFIHKSPPNIPEVKIPEDLTVNIALSLRYEINRGFATLREIGHGRDLKKFLIVIAGL
Sbjct: 121 NASTFIHKSPPNIPEVKIPEDLTVNIALSLRYEINRGFATLREIGHGRDLKKFLIVIAGL 180
Query: 181 WILSVLGSSCNFLTLFYIVFVALYTVPVLYEKYEDKVDAFGEKAEIEFKKYYALFEEKCL 240
WILSVLGSSCNFLTLFYIVFVALYTVPVLYEKYEDKVDAFGEKAEIEFKKYYALFEEKCL
Sbjct: 181 WILSVLGSSCNFLTLFYIVFVALYTVPVLYEKYEDKVDAFGEKAEIEFKKYYALFEEKCL 240
Query: 241 SKIPKGPLKDKKH 253
SKIPKGPLKDKKH
Sbjct: 241 SKIPKGPLKDKKH 253
>Os05g0526400 Reticulon family protein
Length = 251
Score = 388 bits (997), Expect = e-108, Method: Compositional matrix adjust.
Identities = 192/257 (74%), Positives = 214/257 (83%), Gaps = 10/257 (3%)
Query: 1 MAEHKEEQS----VMEKLSEKLHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXIYRLFGRE 56
MAEHKEE+S VM+K+S+KLHG IYRLFGRE
Sbjct: 1 MAEHKEEESLVESVMDKISDKLHGRGGSSSSSSDSDGERTADLKAK------IYRLFGRE 54
Query: 57 RPVHSVLGGGKPADLVLWRNKKISGGVLAGATAIWLLFEIMEYHLLTLVCHCLILSLAVL 116
+PVHSVLGGGKPADL LWRNKKIS GVLAGATAIWLLFE+M+YHLLTL+CHC+IL+LA+L
Sbjct: 55 KPVHSVLGGGKPADLFLWRNKKISVGVLAGATAIWLLFEVMDYHLLTLLCHCIILTLAML 114
Query: 117 FLWSNASTFIHKSPPNIPEVKIPEDLTVNIALSLRYEINRGFATLREIGHGRDLKKFLIV 176
FLWSNASTFI+KSPPNIPEVKIPEDL VN+A SLR+EINRGFATLREIG G DLKKFLIV
Sbjct: 115 FLWSNASTFINKSPPNIPEVKIPEDLAVNVARSLRFEINRGFATLREIGQGHDLKKFLIV 174
Query: 177 IAGLWILSVLGSSCNFLTLFYIVFVALYTVPVLYEKYEDKVDAFGEKAEIEFKKYYALFE 236
+ GLW+LSVLGS CNFLTLFYIVF+ LYTVPVLYEKYED++DAFGEKA IE KKYYA+F+
Sbjct: 175 VVGLWVLSVLGSCCNFLTLFYIVFMVLYTVPVLYEKYEDQIDAFGEKAMIELKKYYAIFD 234
Query: 237 EKCLSKIPKGPLKDKKH 253
EKCLSKIPKGPLK+KKH
Sbjct: 235 EKCLSKIPKGPLKNKKH 251
>Os01g0226300 Reticulon family protein
Length = 178
Score = 277 bits (709), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 131/178 (73%), Positives = 152/178 (85%)
Query: 76 NKKISGGVLAGATAIWLLFEIMEYHLLTLVCHCLILSLAVLFLWSNASTFIHKSPPNIPE 135
N+ IS GVL GATAIW+LFE++ YHLLT VCH LI SL +LFLWSNAS+FI+KSPP IPE
Sbjct: 1 NRNISAGVLGGATAIWILFELLGYHLLTFVCHGLIFSLGLLFLWSNASSFINKSPPRIPE 60
Query: 136 VKIPEDLTVNIALSLRYEINRGFATLREIGHGRDLKKFLIVIAGLWILSVLGSSCNFLTL 195
V IPEDL VNIALS RYEINR FA LR+I GRD+KKFLIVIAGLW+LSVLGS CNFLTL
Sbjct: 61 VIIPEDLVVNIALSTRYEINRAFANLRQIALGRDIKKFLIVIAGLWLLSVLGSCCNFLTL 120
Query: 196 FYIVFVALYTVPVLYEKYEDKVDAFGEKAEIEFKKYYALFEEKCLSKIPKGPLKDKKH 253
YIVFV L+TVP+LYEKYED++D++GEK +E KK YA+ + K LSK+P+GPLKDKKH
Sbjct: 121 VYIVFVVLHTVPILYEKYEDQIDSYGEKGWVEIKKQYAVLDAKVLSKVPRGPLKDKKH 178
>Os02g0265900 Reticulon family protein
Length = 230
Score = 262 bits (669), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 121/204 (59%), Positives = 154/204 (75%)
Query: 50 YRLFGRERPVHSVLGGGKPADLVLWRNKKISGGVLAGATAIWLLFEIMEYHLLTLVCHCL 109
+RL G ++ VH LGGGK AD++LW++KKIS V+ GAT +W+LFE+++YH LTL+ H L
Sbjct: 26 FRLLGGDKSVHQALGGGKAADVLLWKDKKISAAVIGGATVLWVLFEVVDYHFLTLISHVL 85
Query: 110 ILSLAVLFLWSNASTFIHKSPPNIPEVKIPEDLTVNIALSLRYEINRGFATLREIGHGRD 169
I LA+LFLWS A+ FI KSPPNIPEVKI EDL VN+AL+LR +IN+ LREI G D
Sbjct: 86 IGVLAILFLWSKATIFIKKSPPNIPEVKISEDLAVNVALALRTDINQALHLLREISLGHD 145
Query: 170 LKKFLIVIAGLWILSVLGSSCNFLTLFYIVFVALYTVPVLYEKYEDKVDAFGEKAEIEFK 229
L KFL VI LWILS +GS C+FLTLFY+ + L+TVP+LY KY+DKVD F KA +E
Sbjct: 146 LMKFLGVIVALWILSEIGSLCDFLTLFYVAVLMLHTVPILYHKYQDKVDHFAGKAHVELS 205
Query: 230 KYYALFEEKCLSKIPKGPLKDKKH 253
+ Y++ + K LSKIP+GP KDKK
Sbjct: 206 RQYSVLDAKVLSKIPRGPAKDKKQ 229
>Os06g0503400 Reticulon family protein
Length = 265
Score = 250 bits (639), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 115/204 (56%), Positives = 154/204 (75%)
Query: 50 YRLFGRERPVHSVLGGGKPADLVLWRNKKISGGVLAGATAIWLLFEIMEYHLLTLVCHCL 109
+RL G + VH LGGGK AD++LW++KK S V+ GAT IW+LFE+++YHLLTL+ H +
Sbjct: 62 FRLLGEDTSVHKALGGGKTADVLLWKDKKTSAVVIGGATVIWILFEVLDYHLLTLLSHVM 121
Query: 110 ILSLAVLFLWSNASTFIHKSPPNIPEVKIPEDLTVNIALSLRYEINRGFATLREIGHGRD 169
I +LA+LFLWS A+TFI KSPP+IP V+IPED+ VN++ +LR +INR REI G D
Sbjct: 122 IGALAILFLWSKATTFIKKSPPDIPVVQIPEDVAVNVSRALRSDINRALHLFREIALGHD 181
Query: 170 LKKFLIVIAGLWILSVLGSSCNFLTLFYIVFVALYTVPVLYEKYEDKVDAFGEKAEIEFK 229
LKKFL VI LW+LS +GS C+FLTL Y+ + L+TVP+LY+KY+DKVD F +A E
Sbjct: 182 LKKFLGVIVALWVLSEVGSCCDFLTLIYVAVLMLHTVPILYDKYQDKVDHFAGRAHSEAC 241
Query: 230 KYYALFEEKCLSKIPKGPLKDKKH 253
K+Y + + K LSKIP+GP+K KK+
Sbjct: 242 KHYEVLDAKVLSKIPRGPVKPKKN 265
>Os05g0312500 Reticulon family protein
Length = 251
Score = 235 bits (600), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 118/244 (48%), Positives = 158/244 (64%), Gaps = 2/244 (0%)
Query: 1 MAEHKEEQSVMEKLSEKLHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXIYRLFGRERPVH 60
M+E +E S++EK+++K+H RLFGR P+H
Sbjct: 2 MSEGEEHGSLLEKINDKIH--EFKKGSSSSSSSDSDDDKKHHHKSKSKKKRLFGRTNPLH 59
Query: 61 SVLGGGKPADLVLWRNKKISGGVLAGATAIWLLFEIMEYHLLTLVCHCLILSLAVLFLWS 120
VLGGGK ADLVLWR+K+ SG +LAG T IWLLFE + YHLLT CH L++ L V F+W+
Sbjct: 60 HVLGGGKAADLVLWRDKQTSGSILAGVTVIWLLFEGIGYHLLTFFCHSLMVFLTVCFVWA 119
Query: 121 NASTFIHKSPPNIPEVKIPEDLTVNIALSLRYEINRGFATLREIGHGRDLKKFLIVIAGL 180
NA++FI++ PP P+ + E + IA LR EIN F TLR + G+DLK +L+ +AGL
Sbjct: 120 NAASFINRGPPKFPDAILSEVQCLKIAHILRKEINEAFLTLRHVASGKDLKTYLMTVAGL 179
Query: 181 WILSVLGSSCNFLTLFYIVFVALYTVPVLYEKYEDKVDAFGEKAEIEFKKYYALFEEKCL 240
W +S++GS +FLTL Y +F+ YT+P+LYEKYED+VD GEKA IE KK YA+ + K L
Sbjct: 180 WFVSIIGSCFSFLTLSYTIFLMAYTLPMLYEKYEDEVDVVGEKALIELKKQYAVLDHKLL 239
Query: 241 SKIP 244
SKIP
Sbjct: 240 SKIP 243
>Os05g0550100
Length = 788
Score = 215 bits (548), Expect = 2e-56, Method: Composition-based stats.
Identities = 95/204 (46%), Positives = 141/204 (69%)
Query: 49 IYRLFGRERPVHSVLGGGKPADLVLWRNKKISGGVLAGATAIWLLFEIMEYHLLTLVCHC 108
+ RLF R++PVH +LGG K AD++LWR++ +S G+LAGAT IW LF++ EY+L+TL+CH
Sbjct: 16 VIRLFHRQKPVHKILGGRKVADIMLWRDRNLSAGILAGATLIWFLFDVAEYNLVTLLCHI 75
Query: 109 LILSLAVLFLWSNASTFIHKSPPNIPEVKIPEDLTVNIALSLRYEINRGFATLREIGHGR 168
+L + VLF+WSNA+ ++PP IPEV + E +AL+L ++ A L +I G+
Sbjct: 76 ALLGMLVLFIWSNAAPLFDRAPPRIPEVIVSEHAFRELALTLHSKVAHFSAVLYDISCGK 135
Query: 169 DLKKFLIVIAGLWILSVLGSSCNFLTLFYIVFVALYTVPVLYEKYEDKVDAFGEKAEIEF 228
+L+KFL VI LWIL+V+G +C+F TL Y+ F+ T+P LYE+YE +VD K +
Sbjct: 136 ELRKFLAVIGSLWILAVIGETCSFTTLLYVGFLCALTLPALYERYETEVDHLVAKGGQDL 195
Query: 229 KKYYALFEEKCLSKIPKGPLKDKK 252
KK+Y + L+KIP+GP+K K+
Sbjct: 196 KKFYKKIDSNVLNKIPRGPVKTKE 219
>Os03g0781700 Reticulon family protein
Length = 247
Score = 214 bits (544), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 101/202 (50%), Positives = 144/202 (71%)
Query: 51 RLFGRERPVHSVLGGGKPADLVLWRNKKISGGVLAGATAIWLLFEIMEYHLLTLVCHCLI 110
+LFGR++ +H VLGGGKPAD++LWRNKKIS VLA ATAIW+ FE ++YH LT+V L+
Sbjct: 44 KLFGRQKTIHRVLGGGKPADVLLWRNKKISSSVLALATAIWVFFEWLDYHFLTIVSFALV 103
Query: 111 LSLAVLFLWSNASTFIHKSPPNIPEVKIPEDLTVNIALSLRYEINRGFATLREIGHGRDL 170
L + V F+WSN S+ + SP +P V++PE+L VNIA+++ ++N+ + L+++ R+L
Sbjct: 104 LGMVVQFVWSNFSSALSGSPSKVPRVELPEELFVNIAVAVGTQVNKFLSFLQDVSCERNL 163
Query: 171 KKFLIVIAGLWILSVLGSSCNFLTLFYIVFVALYTVPVLYEKYEDKVDAFGEKAEIEFKK 230
K F++ I GLW +V+G CNFLT+ YI FV+ +T+PVLYEKYED+VD F +
Sbjct: 164 KHFVLAIVGLWAAAVIGGWCNFLTVIYIGFVSAHTLPVLYEKYEDQVDDFLYNILGLLRD 223
Query: 231 YYALFEEKCLSKIPKGPLKDKK 252
Y ++ LSKIPKG +K KK
Sbjct: 224 QYQKLDQGVLSKIPKGNMKFKK 245
>Os07g0142000 Reticulon family protein
Length = 246
Score = 199 bits (505), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 94/202 (46%), Positives = 136/202 (67%)
Query: 51 RLFGRERPVHSVLGGGKPADLVLWRNKKISGGVLAGATAIWLLFEIMEYHLLTLVCHCLI 110
RLFG ++ VH VLGGGK AD++LWRNKKIS VLA ATA+W+ FE ++YH LT+ C L+
Sbjct: 43 RLFGGQKSVHHVLGGGKSADVLLWRNKKISSSVLAVATAVWVFFEWLDYHFLTIACFVLV 102
Query: 111 LSLAVLFLWSNASTFIHKSPPNIPEVKIPEDLTVNIALSLRYEINRGFATLREIGHGRDL 170
L + V F WS + ++ SP +P V++P++L NI ++ ++N+ TL+++ GRDL
Sbjct: 103 LGMVVQFAWSTFAGMLNGSPSKVPRVELPDELFANIGSAIGTQVNKFLGTLQDVSCGRDL 162
Query: 171 KKFLIVIAGLWILSVLGSSCNFLTLFYIVFVALYTVPVLYEKYEDKVDAFGEKAEIEFKK 230
K FL+VIAG + +++GS CN LT+ YI FV +T+PVLYEK ++KVD F +
Sbjct: 163 KNFLLVIAGFFAAAIIGSWCNLLTVIYIGFVCAHTLPVLYEKNQEKVDEFLYNTLGLLQN 222
Query: 231 YYALFEEKCLSKIPKGPLKDKK 252
Y ++ L K+PKG +K KK
Sbjct: 223 QYQKLDKGVLGKVPKGIIKLKK 244
>Os01g0139000 Reticulon family protein
Length = 213
Score = 169 bits (428), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 78/196 (39%), Positives = 120/196 (61%)
Query: 51 RLFGRERPVHSVLGGGKPADLVLWRNKKISGGVLAGATAIWLLFEIMEYHLLTLVCHCLI 110
+LFGRERP+H LGG K AD++LWR +++S ++AGAT W LFE+ EYH L+L C+ +
Sbjct: 12 KLFGRERPLHDALGGHKAADIILWRERRVSASIVAGATVAWYLFEVAEYHFLSLACYLAM 71
Query: 111 LSLAVLFLWSNASTFIHKSPPNIPEVKIPEDLTVNIALSLRYEINRGFATLREIGHGRDL 170
L + V+F+W+NAS F + P IPE+ + E T + L+L + L +I G+D+
Sbjct: 72 LGMLVVFIWANASAFFNLPAPRIPEIFVSERTTRQVILALHSRLTWFVHRLYDIACGKDI 131
Query: 171 KKFLIVIAGLWILSVLGSSCNFLTLFYIVFVALYTVPVLYEKYEDKVDAFGEKAEIEFKK 230
K F++ + L+I SV+ S + LTL Y+V + T+PV+YE YE +VD A + +
Sbjct: 132 KMFILTVFSLFIASVIASCFSSLTLLYLVVLGTMTLPVMYENYESEVDHLVSTAVHDLRS 191
Query: 231 YYALFEEKCLSKIPKG 246
+ + KIP+G
Sbjct: 192 HVGDIDSGVFKKIPRG 207
>Os01g0691400 Reticulon family protein
Length = 202
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 104/167 (62%), Gaps = 12/167 (7%)
Query: 97 MEYHLLTLVCHCLILSLAVLFLWSNASTFIHKSPPNIPEVKIPEDLTVNIALSLRYEINR 156
+EY+++ L+C IL++ V+F+WSNA+ + ++PP IPE+ I E +AL++ Y++
Sbjct: 34 VEYNIIPLLCQIAILAMLVIFIWSNAAPLLDRAPPRIPEIIISEHAFREMALTVHYKLTY 93
Query: 157 GFATLREIGHGRDLKKFLI------------VIAGLWILSVLGSSCNFLTLFYIVFVALY 204
+ L +I G+DLK+FL+ V+ L +LS +GSSC+ +L YI F+ +
Sbjct: 94 TVSVLYDIACGKDLKRFLLFWTNNQIVYDIKVVGSLLVLSAIGSSCSLTSLLYIGFLCAH 153
Query: 205 TVPVLYEKYEDKVDAFGEKAEIEFKKYYALFEEKCLSKIPKGPLKDK 251
T+PVLY++Y+ +VD K + KK+Y + L+KIP+GP+K K
Sbjct: 154 TLPVLYQRYKTEVDHLVAKGSDDIKKFYKKVDSNLLNKIPRGPVKTK 200
>Os01g0851300 Reticulon family protein
Length = 203
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 103/180 (57%), Gaps = 1/180 (0%)
Query: 51 RLFGRERPVHSVLGGGKPADLVLWRNKKISGGVLAGATAIWLLFEIME-YHLLTLVCHCL 109
RL G +R +H +LGGG AD+VLWR K+++G LA A W+LF + Y LL+ V L
Sbjct: 9 RLLGAQRSLHGLLGGGAMADVVLWRRKEVAGWSLAAVAASWVLFYCLPGYTLLSFVSSVL 68
Query: 110 ILSLAVLFLWSNASTFIHKSPPNIPEVKIPEDLTVNIALSLRYEINRGFATLREIGHGRD 169
++ L VLF+W+ A+ +++ PP +P +KI ED A ++ +++ I HG+D
Sbjct: 69 MIVLVVLFVWAKAARLLNRPPPPVPLIKISEDSMSKAAAAVGNILHKALQGFENIAHGKD 128
Query: 170 LKKFLIVIAGLWILSVLGSSCNFLTLFYIVFVALYTVPVLYEKYEDKVDAFGEKAEIEFK 229
F +++ L ++S++G + +TL Y V T+P L +KYE+ + F +A +
Sbjct: 129 SSLFYKMVSVLLLISIVGRVTDLITLVYACLVLALTIPALVDKYEENIAKFLNQASANIQ 188
>Os03g0336600 Reticulon family protein
Length = 231
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 113/194 (58%)
Query: 59 VHSVLGGGKPADLVLWRNKKISGGVLAGATAIWLLFEIMEYHLLTLVCHCLILSLAVLFL 118
VH + GGGK AD++LW+ +++ GV+ GAT W LFE LT+ L++ + V F+
Sbjct: 37 VHRIAGGGKAADIILWKRGRVTIGVIFGATMAWWLFEKSGLSFLTVCSDVLLILIVVQFI 96
Query: 119 WSNASTFIHKSPPNIPEVKIPEDLTVNIALSLRYEINRGFATLREIGHGRDLKKFLIVIA 178
+ ++K P +PE+ + E++ N A S R ++N +I G+D + F V+
Sbjct: 97 RIKVAGLLNKQPRPLPELVLSEEMVSNAAASFRVKVNNMLMIAHDITLGKDFRLFFQVVL 156
Query: 179 GLWILSVLGSSCNFLTLFYIVFVALYTVPVLYEKYEDKVDAFGEKAEIEFKKYYALFEEK 238
LW+LSV+G+ C+ +TL Y +AL T+P LY K +++VD + ++Y + +E
Sbjct: 157 LLWLLSVIGNFCSSITLAYFGTIALVTIPALYSKNQEQVDRYAGMVHRNISRHYKIVDEN 216
Query: 239 CLSKIPKGPLKDKK 252
+S++P+ ++DK+
Sbjct: 217 VMSRLPRSFIRDKE 230
>Os04g0367400 Reticulon family protein
Length = 213
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 101/185 (54%), Gaps = 3/185 (1%)
Query: 61 SVLGGGKPADLVLWRNKKISGGVLAGATAIWLLFEIMEYHLLTLVCHCLILSLAVLFLWS 120
S L G D+V+WR +S +LA + WLLF Y L+L + L+L L VLFLW+
Sbjct: 17 SSLIGEFVGDVVMWRRGDVSACLLAATVSGWLLFGSGGYTFLSLASNVLLLLLTVLFLWA 76
Query: 121 NASTFIHKSPPNIPEVKIPEDLTVNIALSLRYEINRGFATLREIGHGRDLKKFLIVIAGL 180
A+ +++ P IPE++I + + +A L +N F+ +I G+D F V L
Sbjct: 77 KAARLLNRPEPPIPEMRISQQVVNEVAALLHSGMNTVFSVFHDIALGKDSVLFYQVFLSL 136
Query: 181 WILSVLGSSCNFLTLFYIVFVALYTVPVLYEKYEDKVDAFGEKAEIEFKKY---YALFEE 237
WI+S++GS +F TL Y VA+ T+P LY+KYE+ +D + A + + Y Y F
Sbjct: 137 WIISIIGSLTDFTTLCYTSIVAVLTIPALYQKYEECIDRYMRFAYLNLQMYEMVYERFSA 196
Query: 238 KCLSK 242
KC +
Sbjct: 197 KCFHR 201
>Os04g0670000 Reticulon family protein
Length = 199
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 100/163 (61%)
Query: 56 ERPVHSVLGGGKPADLVLWRNKKISGGVLAGATAIWLLFEIMEYHLLTLVCHCLILSLAV 115
R +H++LGGG ADLVLWR + +S +AGATA+W LFE Y +++ + L+L +A+
Sbjct: 6 RRSLHALLGGGAVADLVLWRRRNVSAAAVAGATAVWFLFERAGYSFPSVMANALLLLVAI 65
Query: 116 LFLWSNASTFIHKSPPNIPEVKIPEDLTVNIALSLRYEINRGFATLREIGHGRDLKKFLI 175
LF W+ +++ +++ P +P++++ + + A IN+ A +I RD F+
Sbjct: 66 LFFWAKSASLLNRPLPPLPKLEVSDVVVEKAADRALVWINKVLAVGHDIAIKRDRSVFIK 125
Query: 176 VIAGLWILSVLGSSCNFLTLFYIVFVALYTVPVLYEKYEDKVD 218
VI LW++S +G NFLTL YI + VP LYEKY+D+VD
Sbjct: 126 VILILWVVSYIGMLFNFLTLIYIGVMFSLLVPPLYEKYQDQVD 168
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.324 0.142 0.430
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 7,755,996
Number of extensions: 292709
Number of successful extensions: 695
Number of sequences better than 1.0e-10: 15
Number of HSP's gapped: 690
Number of HSP's successfully gapped: 15
Length of query: 253
Length of database: 17,035,801
Length adjustment: 99
Effective length of query: 154
Effective length of database: 11,866,615
Effective search space: 1827458710
Effective search space used: 1827458710
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 155 (64.3 bits)