BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0558400 Os12g0558400|AK073071
(265 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os12g0558400 FBD domain containing protein 519 e-148
Os12g0557900 Cyclin-like F-box domain containing protein 393 e-110
Os12g0558100 322 1e-88
Os12g0558366 287 5e-78
Os07g0285200 Cyclin-like F-box domain containing protein 190 8e-49
Os07g0285700 Cyclin-like F-box domain containing protein 185 4e-47
Os07g0286900 152 3e-37
Os07g0287000 Cyclin-like F-box domain containing protein 138 4e-33
Os07g0242700 120 1e-27
Os12g0496700 119 2e-27
Os07g0286300 114 8e-26
Os07g0285400 107 7e-24
Os07g0277000 101 7e-22
Os07g0277400 FBD domain containing protein 89 2e-18
Os01g0596300 Cyclin-like F-box domain containing protein 85 5e-17
Os04g0208500 Cyclin-like F-box domain containing protein 84 8e-17
Os01g0595800 Cyclin-like F-box domain containing protein 82 5e-16
Os01g0730100 Cyclin-like F-box domain containing protein 80 2e-15
Os01g0595900 Cyclin-like F-box domain containing protein 78 9e-15
Os07g0286100 Cyclin-like F-box domain containing protein 76 2e-14
Os01g0596100 Cyclin-like F-box domain containing protein 76 3e-14
Os01g0595700 Similar to Ribosomal RNA apurinic site specifi... 76 3e-14
Os01g0596000 Cyclin-like F-box domain containing protein 75 6e-14
Os04g0208600 Cyclin-like F-box domain containing protein 71 1e-12
Os01g0706300 65 5e-11
>Os12g0558400 FBD domain containing protein
Length = 265
Score = 519 bits (1337), Expect = e-148, Method: Compositional matrix adjust.
Identities = 252/265 (95%), Positives = 252/265 (95%)
Query: 1 MPCLGELGAGWNRGCXXXXXXXXXXXXXGVSNDTRKDEKLEEVIVEDAPLLERLTPHTIW 60
MPCLGELGAGWNRGC GVSNDTRKDEKLEEVIVEDAPLLERLTPHTIW
Sbjct: 1 MPCLGELGAGWNRGCRRLRISSLTLRSLGVSNDTRKDEKLEEVIVEDAPLLERLTPHTIW 60
Query: 61 QGDFVIRVIQAPKLKTLGYLSHKITTLELGTMVFQKMVPVSLSNVMRSVKILALDTTPDL 120
QGDFVIRVIQAPKLKTLGYLSHKITTLELGTMVFQKMVPVSLSNVMRSVKILALDTTPDL
Sbjct: 61 QGDFVIRVIQAPKLKTLGYLSHKITTLELGTMVFQKMVPVSLSNVMRSVKILALDTTPDL 120
Query: 121 DVVIDFIKCFPCVEKLYIVAFNQGNLKNIRRNVSLECFDLHLKMVEFINYQGNMLDLNFI 180
DVVIDFIKCFPCVEKLYIVAFNQGNLKNIRRNVSLECFDLHLKMVEFINYQGNMLDLNFI
Sbjct: 121 DVVIDFIKCFPCVEKLYIVAFNQGNLKNIRRNVSLECFDLHLKMVEFINYQGNMLDLNFI 180
Query: 181 RFFVLNARVLECIKLVARRDKCEAKWIEKQNQKLQLYGRASRRVTFDFQADYGVDSLVHM 240
RFFVLNARVLECIKLVARRDKCEAKWIEKQNQKLQLYGRASRRVTFDFQADYGVDSLVHM
Sbjct: 181 RFFVLNARVLECIKLVARRDKCEAKWIEKQNQKLQLYGRASRRVTFDFQADYGVDSLVHM 240
Query: 241 KHISDLTTDDPFDRSFCRCRDEEIY 265
KHISDLTTDDPFDRSFCRCRDEEIY
Sbjct: 241 KHISDLTTDDPFDRSFCRCRDEEIY 265
>Os12g0557900 Cyclin-like F-box domain containing protein
Length = 437
Score = 393 bits (1010), Expect = e-110, Method: Compositional matrix adjust.
Identities = 194/254 (76%), Positives = 211/254 (83%), Gaps = 1/254 (0%)
Query: 12 NRGCXXXXXXXXXXXXXGVSNDTRKDEK-LEEVIVEDAPLLERLTPHTIWQGDFVIRVIQ 70
NRGC GVS+ E LEEVI+EDAPLLERLTP IW FVIRVIQ
Sbjct: 184 NRGCSRLRISSLTLQSLGVSDTYFSVEGMLEEVIIEDAPLLERLTPPVIWHEGFVIRVIQ 243
Query: 71 APKLKTLGYLSHKITTLELGTMVFQKMVPVSLSNVMRSVKILALDTTPDLDVVIDFIKCF 130
APKLKTLGYLS KI+TL+LG MVFQK+VPVSLSNVMR++KILAL T PDLDVVIDF+K F
Sbjct: 244 APKLKTLGYLSQKISTLQLGNMVFQKLVPVSLSNVMRAMKILALHTAPDLDVVIDFLKFF 303
Query: 131 PCVEKLYIVAFNQGNLKNIRRNVSLECFDLHLKMVEFINYQGNMLDLNFIRFFVLNARVL 190
PCVEKLYIVA NQGN KN+RR VSLEC DLHLKMVEFINY GN+ DLNFI+FFVLNA+VL
Sbjct: 304 PCVEKLYIVALNQGNFKNVRRYVSLECLDLHLKMVEFINYHGNLSDLNFIKFFVLNAQVL 363
Query: 191 ECIKLVARRDKCEAKWIEKQNQKLQLYGRASRRVTFDFQADYGVDSLVHMKHISDLTTDD 250
ECIK VA RDKC+AKWI+ Q+Q+LQLY RASR VT DFQADYGVDSLVH+KHISDL TDD
Sbjct: 364 ECIKFVACRDKCDAKWIKTQHQRLQLYSRASRGVTLDFQADYGVDSLVHVKHISDLITDD 423
Query: 251 PFDRSFCRCRDEEI 264
PFDRSFCRCRDEEI
Sbjct: 424 PFDRSFCRCRDEEI 437
>Os12g0558100
Length = 299
Score = 322 bits (826), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 159/202 (78%), Positives = 173/202 (85%)
Query: 35 RKDEKLEEVIVEDAPLLERLTPHTIWQGDFVIRVIQAPKLKTLGYLSHKITTLELGTMVF 94
R KLEEVI+E+APLLERLTP I FVI V QAPK+KTLGYLSHKI+T+ELGTMVF
Sbjct: 88 RGQGKLEEVIIENAPLLERLTPPCIRNEGFVIWVTQAPKMKTLGYLSHKISTIELGTMVF 147
Query: 95 QKMVPVSLSNVMRSVKILALDTTPDLDVVIDFIKCFPCVEKLYIVAFNQGNLKNIRRNVS 154
QK+VPVSLSNVM +VKILALD PDLDVVIDF+KCFPCVEKLY+VAF QGN KN R VS
Sbjct: 148 QKLVPVSLSNVMCTVKILALDRAPDLDVVIDFLKCFPCVEKLYVVAFIQGNFKNALRYVS 207
Query: 155 LECFDLHLKMVEFINYQGNMLDLNFIRFFVLNARVLECIKLVARRDKCEAKWIEKQNQKL 214
LEC DLHL+MVEFINYQGNMLDLNFIRFFVLNARVLEC+KLVA DK KW+EKQ QKL
Sbjct: 208 LECLDLHLRMVEFINYQGNMLDLNFIRFFVLNARVLECVKLVAAHDKYGRKWMEKQQQKL 267
Query: 215 QLYGRASRRVTFDFQADYGVDS 236
QLYGRASR +TFDFQADYG +
Sbjct: 268 QLYGRASRGITFDFQADYGSNG 289
>Os12g0558366
Length = 343
Score = 287 bits (735), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 152/242 (62%), Positives = 177/242 (73%), Gaps = 2/242 (0%)
Query: 2 PCLGELGAGWNRGCXXXXXXXXXXXXXGVSNDTRKDE-KLEEVIVEDAPLLERLT-PHTI 59
P L L NR C GVS+ E KLE+V + DAPLLERL P
Sbjct: 96 PVLESLVLVGNRWCRCLHISSLTLQSLGVSDGFSSVEGKLEKVTIVDAPLLERLIIPRDK 155
Query: 60 WQGDFVIRVIQAPKLKTLGYLSHKITTLELGTMVFQKMVPVSLSNVMRSVKILALDTTPD 119
WQ DFV+RV QAPKL+ LGYLS I+ LE+GTMV QK+VPVSLSNV+R+VKILA++T
Sbjct: 156 WQDDFVVRVTQAPKLEALGYLSDGISRLEIGTMVVQKLVPVSLSNVVRTVKILAINTNFY 215
Query: 120 LDVVIDFIKCFPCVEKLYIVAFNQGNLKNIRRNVSLECFDLHLKMVEFINYQGNMLDLNF 179
+VVIDFIKCFPCVEKLY+ N+++NVSLEC DLHLKMVEFINYQGN+ DLNF
Sbjct: 216 PNVVIDFIKCFPCVEKLYVKVRYYAYFNNVQQNVSLECLDLHLKMVEFINYQGNVEDLNF 275
Query: 180 IRFFVLNARVLECIKLVARRDKCEAKWIEKQNQKLQLYGRASRRVTFDFQADYGVDSLVH 239
IRFFVLNA VLEC+KLV RR+KC+ KWIE+Q+QKLQLY ASRRVTFDFQADY DSL
Sbjct: 276 IRFFVLNALVLECMKLVTRRNKCDVKWIEEQHQKLQLYSGASRRVTFDFQADYEGDSLGS 335
Query: 240 MK 241
++
Sbjct: 336 LR 337
>Os07g0285200 Cyclin-like F-box domain containing protein
Length = 471
Score = 190 bits (483), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 104/222 (46%), Positives = 141/222 (63%), Gaps = 6/222 (2%)
Query: 39 KLEEVIVEDAPLLERLTPHTIWQGDFVIRVIQAPKLKTLGYLSHKITTLELGTMVFQKMV 98
+L+EV++EDAP LERL P G IRVI APKL+ +G LS I+ L LGT +FQ+M
Sbjct: 252 ELQEVVIEDAPCLERLLPLCPNDGVAAIRVIAAPKLEIMGPLSDGISQLHLGTTIFQEMT 311
Query: 99 PVSLSNVMRSVKILALDT-TPDLDVVIDFIKCFPCVEKLYIVAFNQGNLKNIRRNVSL-- 155
VSL+ MRSVK+L LD+ P+LD V+DF+ CFPC+E+LYI + +KN RR L
Sbjct: 312 AVSLTTSMRSVKVLVLDSDGPNLDAVVDFLSCFPCLERLYIASQPFKVIKNTRRYDPLNP 371
Query: 156 -ECFDLHLKMVEFINYQGNMLDLNFIRFFVLNARVLECIKLVARRDKCEAKWIEKQNQKL 214
EC HLK V NY G D++F +FFVLNA+ L ++L A + C KW+ Q+++L
Sbjct: 372 IECIQFHLKKVVIRNYGGRRSDVDFAKFFVLNAKALREMEL-AGLNNCNQKWLANQHRRL 430
Query: 215 QLYGRASRRVTFDFQADYGVDSLVHMKHISDLTTDDPFDRSF 256
QL +AS+ F F+ + D ++ KH DL+ DPFDRS
Sbjct: 431 QLEKKASQNAQFTFKTTHTSDFSMN-KHTHDLSISDPFDRSL 471
>Os07g0285700 Cyclin-like F-box domain containing protein
Length = 475
Score = 185 bits (469), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 143/229 (62%), Gaps = 6/229 (2%)
Query: 36 KDEKLEEVIVEDAPLLERLTPHTIWQGDFVIRVIQAPKLKTLGYLSHKITTLELGTMVFQ 95
+D +EV++EDAP LERL P G IRVI APKL+ LG LS I+ L LGT FQ
Sbjct: 239 RDANFQEVVIEDAPCLERLMPLYPNHGPATIRVIAAPKLEVLGVLSDGISQLHLGTTFFQ 298
Query: 96 KMVPVSLSNVMRSVKILALDTT-PDLDVVIDFIKCFPCVEKLYIVAFNQGNLKNIRRNVS 154
KM+ V+L+ +R+VK+L LD+ P+LDVV+DF+KCFPC+E+LY+V+ +KNIR
Sbjct: 299 KMIAVNLTTSIRTVKVLVLDSNGPNLDVVVDFLKCFPCLERLYVVSRPHKVIKNIRSYDP 358
Query: 155 L---ECFDLHLKMVEFINYQGNMLDLNFIRFFVLNARVLECIKLVARRDKCEAKWIEKQN 211
L EC +LHL+ V Y+G D++F +FFVLNA+VL + + ++ KW + Q+
Sbjct: 359 LHPIECMELHLRKVVIRYYEGKRPDVDFAKFFVLNAKVLREMDFCSPSNR-NLKWQDNQH 417
Query: 212 QKLQLYGRASRRVTFDFQADYGV-DSLVHMKHISDLTTDDPFDRSFCRC 259
++L L +AS+ F F+ + L +H +L+ DPFD S C C
Sbjct: 418 RRLSLENKASQVAQFTFKTTSRTRNELTRNRHTHELSMSDPFDFSSCLC 466
>Os07g0286900
Length = 497
Score = 152 bits (383), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 92/215 (42%), Positives = 125/215 (58%), Gaps = 8/215 (3%)
Query: 47 DAPLLERLTPHTIWQGDFVIRVIQAPKLKTLGYLSHKITTLELGTMVFQKMVPVSLSNVM 106
DAPLLERL P + G IRVI AP+L LG L I+ LE+GT+V Q+M PVS+S +
Sbjct: 285 DAPLLERLMPTLLDDGPPSIRVISAPRLHILGILPSFISRLEIGTVVIQEMPPVSVS--V 342
Query: 107 RSVKILALDTT-PDLDVVIDFIKCFPCVEKLYIVAFNQGNLKNIRRNV---SLECFDLHL 162
+VKIL L + P+L V++ +K FPC+EKLYI Q KN RN + C + HL
Sbjct: 343 PTVKILVLQSVGPNLAAVVNILKYFPCLEKLYIKITLQSTAKNELRNYVPGPVHCLEHHL 402
Query: 163 KMVEFINYQGNMLDLNFIRFFVLNARVLECIKL-VARRDKCEAKWIEKQNQKLQLYGRAS 221
K + YQ +NF +FF+LNA+VL+ +K V + KW+ Q ++LQL +AS
Sbjct: 403 KSIVLKRYQAKTPVVNFAKFFILNAKVLKVMKFGVQDITRQNEKWMTNQRRRLQLDNKAS 462
Query: 222 RRVTFDFQADYGVDSLVHMKHISDLTTDDPFDRSF 256
+ FDF + Y D L + I D + DPFD S
Sbjct: 463 QDARFDFDSKYWSDYLESTR-IDDFSVSDPFDLSL 496
>Os07g0287000 Cyclin-like F-box domain containing protein
Length = 447
Score = 138 bits (348), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 84/228 (36%), Positives = 126/228 (55%), Gaps = 12/228 (5%)
Query: 35 RKDE---KLEEVIVEDAPLLERLTPHTIWQGDFVIRVIQAPKLKTLGYLSHKITTLELGT 91
R+DE +L+++ VED PLLERL H + G I V+ AP+L+ LGYL I +L++G
Sbjct: 220 RRDEVGDELQDLAVEDGPLLERLLGHDVNWGP-SIHVLHAPRLEMLGYLGVGIPSLQIGA 278
Query: 92 MVFQKMVPVSLSNVMRSVKILALDTT-PDLDVVIDFIKCFPCVEKLYIVA--FNQGNLKN 148
+F M V L+ R +K LAL+ P + V+DF++CFPC+E LYI + F +++
Sbjct: 279 ALFHSMRAVRLAAEFRCLKTLALEMVDPQVKPVVDFLRCFPCLEALYITSHMFEPRSMET 338
Query: 149 IR---RNVSLECFDLHLKMVEFINYQGNMLDLNFIRFFVLNARVLECIKLVARRDKCEAK 205
++ + +EC + HLK V Y+G +L RF V NARVL+ +K + D C+
Sbjct: 339 LKCDNMDYPIECLNRHLKKVVLAGYEGRRRELQLARFLVSNARVLQVMKFLCAND-CKPT 397
Query: 206 WIEKQNQKLQLYGRASRRVTFDFQADYGVDSLVHMKHISDLTTDDPFD 253
W+ Q ++L R S F+ Y KH S++T DPFD
Sbjct: 398 WLASQKRQLCWESRLSLGPQVIFEV-YRKSHTRFRKHASNITLVDPFD 444
>Os07g0242700
Length = 461
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/168 (45%), Positives = 102/168 (60%), Gaps = 15/168 (8%)
Query: 40 LEEVIVEDAPLLERLTPHTIWQGDFVIRVIQAPKLKTLGYLSHKITTLELGTMVFQKMVP 99
L+E+IVEDAP LERL +WQ + VI APKL+ LG+LS+ TLE+GT+ + +
Sbjct: 226 LKELIVEDAPRLERLLMPEVWQ-LLRVSVISAPKLEALGWLSNH-CTLEIGTIAIKCSIG 283
Query: 100 V----SLSNVMRSVKILALDT-TPDLDVVIDFIKCFPCVEKLYIVAFNQGNLKNIRRNV- 153
SL+ V R VK+LALD LD+ IDF++CFP +EKLYI F+ N+ R
Sbjct: 284 EFHFDSLTTVARGVKVLALDIDNLSLDMAIDFMRCFPSLEKLYIRKFSH-KCNNVWRQKM 342
Query: 154 ------SLECFDLHLKMVEFINYQGNMLDLNFIRFFVLNARVLECIKL 195
+EC DL+LK VE Y GN ++F FFVLN RVLE ++L
Sbjct: 343 RHKMLDPIECLDLNLKKVEVSGYCGNKSHIDFAMFFVLNGRVLELMRL 390
>Os12g0496700
Length = 568
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/204 (38%), Positives = 119/204 (58%), Gaps = 11/204 (5%)
Query: 36 KDEKLEEVIVEDAPLLERLTPHTIWQGDFVIRVIQAPKLKTLGYLSHKI--TTLELGTMV 93
+ +LEE+IVEDAPLLE+L + + + VI APKL+T+G L+ + + GT
Sbjct: 274 RQTQLEEIIVEDAPLLEKLLDLAV-HNNLRLSVISAPKLETIGCLTDRWFGPRIMFGTTT 332
Query: 94 FQKMVPV-SLSNVMRSVKILALDT-TPDLDVVIDFIKCFPCVEKLYI-VAFNQGNLKNIR 150
K V V L+ +R+++ILA++ +L VID ++CFPC+EKLY+ + GN N
Sbjct: 333 VVKGVSVVRLTEAVRTMRILAINMFVLNLAKVIDLMRCFPCLEKLYLKCCLSAGN--NYW 390
Query: 151 R---NVSLECFDLHLKMVEFINYQGNMLDLNFIRFFVLNARVLECIKLVARRDKCEAKWI 207
R ++ D+ LK VE NY+G ++F +FFVLN +VLE +K V + + ++
Sbjct: 391 RCEYQTLIKILDIRLKTVELENYRGTKPQIDFAQFFVLNGKVLESMKFVVKSEDYYDGFV 450
Query: 208 EKQNQKLQLYGRASRRVTFDFQAD 231
KQ++ LQL RASR F F D
Sbjct: 451 AKQHKMLQLDKRASRCARFKFTTD 474
>Os07g0286300
Length = 488
Score = 114 bits (284), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 121/229 (52%), Gaps = 14/229 (6%)
Query: 36 KDEKLEEVIVEDAPLLERLTPHTIWQGDFVIRVIQ---APKLKTLGYLSHKITTLELGTM 92
+ +EE+I+++ P LERL D + RV+ APKL+ LG LS I+ G +
Sbjct: 262 RTSDMEELIIDNTPSLERLL--MFRSSDKLPRVVSVFSAPKLEVLGCLSDGISDEHYGVV 319
Query: 93 VFQKMVPVSLSNVMRSVKILALDTTPD-LDVVIDFIKCFPCVEKLYIVAFNQGNLKNIRR 151
V+ + + V+ ++R+VKILA + LD + ++CFPCV+KL+I + +I
Sbjct: 320 VWPQQLRVNSMAMLRTVKILAFRIEENSLDATVHILRCFPCVQKLHITLAEGLFVPDIHN 379
Query: 152 NV-----SLECFDLHLKMVEFINYQGNMLDLNFIRFFVLNARVLECIKLVARRDKCEAKW 206
+ ++EC DLHLK + NY+G F +FFVLNA VL+ + A + KW
Sbjct: 380 GLVDDAAAIECLDLHLKEIVVRNYRGQKSHAAFAKFFVLNASVLKVMTFRACV-RLSKKW 438
Query: 207 IEKQNQKLQLYGRASRRVTFDFQAD-YGVDSLV-HMKHISDLTTDDPFD 253
+ Q + L+L +AS F+F D Y +D H + L+ DPFD
Sbjct: 439 LSNQRRLLRLREKASPNARFEFSCDGYFMDYYYNHSQRSHQLSVGDPFD 487
>Os07g0285400
Length = 259
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 88/144 (61%), Gaps = 5/144 (3%)
Query: 31 SNDTRKDEKLEEVIVEDAPLLERLTPHTIWQGDFVIRVIQAPKLKTLGYLSHKITTLELG 90
S + R D +L+EV++ DAP L+RL + G IRVI APK++ LG++S I+ L LG
Sbjct: 112 SWNARDDGRLQEVVIVDAPCLQRLLTPYLNNGPATIRVIAAPKMEALGWISDGISELHLG 171
Query: 91 TMVFQKMVPVSLSNVMRSVKILAL-DTTPDLDVVIDFIKCFPCVEKLYIVAFNQGNLKNI 149
T F K V++ + M +VK+LAL P+LD V+DF+KC PC+E LYI + +KN
Sbjct: 172 TTYFPKTTAVNMPSSMPTVKVLALVSDGPNLDAVVDFLKCVPCLETLYITSRPDKVIKNA 231
Query: 150 RRNVSLECFDLHLK----MVEFIN 169
R + + F L ++ M +++N
Sbjct: 232 RSVFAKDIFYLKIRYYATMSDYVN 255
>Os07g0277000
Length = 207
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 103/194 (53%), Gaps = 6/194 (3%)
Query: 66 IRVIQAPKLKTLGYLSHK---ITTLELGTMVFQKMVPVSLSNVMRSVKILALDT-TPDLD 121
+ VI APKL+TLG L + + L GT+VF+ V+ + + SVK+LAL LD
Sbjct: 7 VSVIMAPKLETLGILDNVNDVYSRLNFGTVVFKGFEVVNFTRPVSSVKVLALIMDNLSLD 66
Query: 122 VVIDFIKCFPCVEKLYIVAFNQGNLKNIRRNV--SLECFDLHLKMVEFINYQGNMLDLNF 179
VI + CFPC+EKLYI G RR +++ ++ LK + +Y+G+ + F
Sbjct: 67 RVIKLMICFPCLEKLYIRGIKYGETNYWRRKYGKTIKSLNICLKTIVLDDYRGSKPQVQF 126
Query: 180 IRFFVLNARVLECIKLVARRDKCEAKWIEKQNQKLQLYGRASRRVTFDFQADYGVDSLVH 239
RFF+ NA LE + ++ + I +Q + L+ RAS+ F F++ VH
Sbjct: 127 ARFFIWNAAKLENMIFMSGPNNDNTYVIAEQPKLLEFEKRASKTAHFHFRSKKCYYDWVH 186
Query: 240 MKHISDLTTDDPFD 253
+K + DL+ DPF+
Sbjct: 187 IKDVHDLSLSDPFE 200
>Os07g0277400 FBD domain containing protein
Length = 366
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 114/211 (54%), Gaps = 11/211 (5%)
Query: 39 KLEEVIVEDAPLLERLTPHTIWQGDFVIRVIQAPKLKTLGYLS----HKITTLELGTMVF 94
+L E+I+E APLLE+L + + + + +I APKL T+G L H+ + GT V
Sbjct: 131 ELGELIIEHAPLLEKLLNFGV-RNELDVSIISAPKLVTVGCLCQQFCHRHSRFTFGTTVI 189
Query: 95 QKMVPVSLSNVMRSVKILALDTTP-DLDVVIDFIKCFPCVEKLYIVAFNQGN---LKNIR 150
+ + SL V+ +VK LA+ D+D V+D ++CFPC+E LY + + +
Sbjct: 190 KGVKNESLPEVVHNVKTLAVSVLLLDVDKVVDILRCFPCLENLYFKSCELTSKVVWRKKY 249
Query: 151 RNVSLECFDLHLKMVEFINYQGNMLDLNFIRFFVLNARVLECIKLVARRDKCEAKWIEKQ 210
RN++ + D+ LK V +Y+G +++F +FFVLNAR LE +K K + + +
Sbjct: 250 RNLT-KSLDIRLKTVVLEDYRGIWAEVHFAQFFVLNARTLEAMKFFV-TCKITIRGLLQN 307
Query: 211 NQKLQLYGRASRRVTFDFQADYGVDSLVHMK 241
+++ + + R V + V +++H++
Sbjct: 308 SERCFSWTKGLRVVLVSYLPQRDVSTMLHVQ 338
>Os01g0596300 Cyclin-like F-box domain containing protein
Length = 474
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 116/237 (48%), Gaps = 27/237 (11%)
Query: 38 EKLEEVIVEDAPLLERLTPHTIWQGD----------FVIRVIQAPKLKTLGYLSHKITTL 87
K EEV V DAPLL+RL +W+ IR+ AP+L+ LGYL + L
Sbjct: 242 SKAEEVAVVDAPLLQRLV---LWKISTSYDTDDELPVKIRLACAPELQVLGYLEPRAHQL 298
Query: 88 ELGTMVFQKMVPVSLSNVMRSVKILALDTT----PDLDVVIDFIKCFPCVEKLYIVA--- 140
++G + + V S+++ S+K+LAL ++ +++ F++CFP VE L+I +
Sbjct: 299 QIGETIIKADTKVIPSSMVPSIKVLALRVNFCVQEEIAMLVSFLRCFPNVETLHIESDID 358
Query: 141 ---FNQGNLKNIRRNVSLECFDLHLKMVEFINYQGNMLDLNFIRFFVLNARVLECIKL-V 196
Q + K + +EC + H+K + F ++ G+ +L FI F A+ L+ + L +
Sbjct: 359 DEFTGQPHAKFWQEVCPVECINSHVKKIVFHDFHGDKCELEFIDFIARTAQELQALLLML 418
Query: 197 ARRDKCEAKWIEKQNQKLQLYGRASRRVTFDFQADYGVDSLVHMKHIS-DLTTDDPF 252
+ +++ N +L + AS +VH+ H S DL+ DDPF
Sbjct: 419 TSKTYGPVVDVDEVNSQLGVLSFASEECITSLLGPKV--QMVHIFHRSLDLSVDDPF 473
>Os04g0208500 Cyclin-like F-box domain containing protein
Length = 519
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 102/199 (51%), Gaps = 17/199 (8%)
Query: 41 EEVIVEDAPLLERLTPHTIWQGDFV----IRVIQAPKLKTLGYLSHKITTLELGTMVFQK 96
EE+ V D P LERL W+ D +++ AP L+ GYL L +G +
Sbjct: 289 EEIAVVDTPCLERLIVSGTWRHDGASSGSVKIGNAPALRVFGYLDPAANVLVVGKTAIKS 348
Query: 97 MVPVSLSNVMRSVKILALD----TTPDLDVVIDFIKCFPCVEKLYIVA------FNQGNL 146
VS SN++ +VKILAL+ D ++ + ++CFP +E+L+I + + N
Sbjct: 349 ATKVSPSNMVPNVKILALEVRFGVRNDAKMIPNVLRCFPNIERLHIKSGKTDETTGKLNF 408
Query: 147 KNIRRNVSLECFDLHLKMVEFINYQGNMLDLNFIRFFVLNARVLECIKLVARRDKCEAKW 206
K + + +EC ++M+ F ++ G ++NF++FF RVL+ + ++ D
Sbjct: 409 KFWQESGPIECIRSSIQMIVFHDFHGTRSEVNFLKFFFETTRVLKIVVILF--DTGSFSS 466
Query: 207 IEKQNQKLQLYGRASRRVT 225
+++ K+++ RA++R T
Sbjct: 467 MDEVRSKVEVL-RAAKRPT 484
>Os01g0595800 Cyclin-like F-box domain containing protein
Length = 502
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 112/240 (46%), Gaps = 31/240 (12%)
Query: 41 EEVIVEDAPLLERLTPHTIWQG-----------DFVIRVIQAPKLKTLGYLSHKITTLEL 89
EE+ V AP LERL +W G +++ P+LK LGYL +I LE+
Sbjct: 266 EELAVVVAPRLERLI---LWNGCPCTRRVRRDFRTRVKIGYTPELKVLGYLEPRIHVLEI 322
Query: 90 GTMVFQKMVPVSLSNVMRSVKILAL----DTTPDLDVVIDFIKCFPCVEKLYIVAFNQG- 144
V + S ++ +VK+LA+ + +++ F++CFP VE L+I++
Sbjct: 323 ANTVIEAGTKPSPGTMVPTVKVLAMKVRFGVRQEAKMLLSFLRCFPNVETLHIMSAEADE 382
Query: 145 -------NLKNIRRNVSLECFDLHLKMVEFINYQGNMLDLNFIRFFVLNARVLECIKLVA 197
LK + +EC H+K V F N++G +L F+RF + A++L+ + +V
Sbjct: 383 PTGKLNFKLKFWQDVAPVECLKAHIKKVVFKNFRGERSELAFLRFVLERAQILQTLVVVL 442
Query: 198 RRDKCEAKWIEKQNQKLQ--LYG--RASRRVTFDFQADYGVDSLVHMKHISDLTTDDPFD 253
+ E+ +L+ +Y RAS+ F G S + SDL+ DPFD
Sbjct: 443 TDGDGDHASQEELGNRLKPLIYSTHRASKCAEFFIFVRCGGTSW-SFRTASDLSRSDPFD 501
>Os01g0730100 Cyclin-like F-box domain containing protein
Length = 444
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 103/206 (50%), Gaps = 21/206 (10%)
Query: 40 LEEVIVEDAPLLERLTPHTIWQGDFVIRVIQAPKLKTLGYLSHKITTLELGTMVFQKMVP 99
+E+++E AP LE++ + ++ ++V APKL+ LGYL T+E+G VF +
Sbjct: 214 FDELLIEHAPNLEQVYGNYMYMRSTHLKVAHAPKLEFLGYLGMSFDTIEIGQSVFTE-DD 272
Query: 100 VSLSNVMRSVKILALDTTPDLDVVIDF----IKCFPCVEKLYI--------VAFNQGNLK 147
+ +M S+K LA++ + + I++ +K FPC+E LYI A G+
Sbjct: 273 FDIKTLMPSLKTLAIELSYTSEGYINWFMQLLKLFPCLETLYIRSDTWSKVRAAAPGSWD 332
Query: 148 NIRRNVSLECFDLHLKMVEFINYQGNMLDLNFIRFFVLNARVLECIKLVARRDK-CE--- 203
+R S+ C D HL+ V F Y+G+ +F AR L+ ++ + DK C
Sbjct: 333 VLR---SVPCIDNHLERVVFEVYRGHEWQREMAKFLHGRARFLKAMEFHCQGDKGCSELL 389
Query: 204 -AKWIEKQNQKLQLYGRASRRVTFDF 228
+W+ +Q + L L RAS F F
Sbjct: 390 GEEWVREQQELLCLDSRASLDARFLF 415
>Os01g0595900 Cyclin-like F-box domain containing protein
Length = 543
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 115/237 (48%), Gaps = 31/237 (13%)
Query: 41 EEVIVEDAPLLERLTPHTIWQ------GDFV----IRVIQAPKLKTLGYLSHKITTLELG 90
+E+ + AP L+RL +W+ G+ +++ A +L+ LGYL ++ LE+G
Sbjct: 312 QEIALVVAPRLDRLI---LWKTFMGFPGEIFCRTRVKIGYATELRVLGYLEPRMHELEIG 368
Query: 91 TMVFQKMVPVSLSNVMRSVKILALDT----TPDLDVVIDFIKCFPCVEKLYIVA------ 140
+ +S + SVKILAL + ++ F++CFP VE L++++
Sbjct: 369 NTTIEAGTKMSSDKTVPSVKILALKVRFGIRNEAKLLPVFLRCFPNVETLHVMSDDAHDP 428
Query: 141 FNQGNLKNIRRNVSLECFDLHLKMVEFINYQGNMLDLNFIRFFVLNARVLECIKLV-ARR 199
+ NLK +EC H+ V F ++G +L F++F + A L+ I +V A R
Sbjct: 429 TGKLNLKFWHDVGPIECLHSHVNKVVFHMFRGERSELAFLKFILERAEALQKIVVVLANR 488
Query: 200 DKCEAKWIEKQNQKLQ---LYGRASRRVTFDFQADYGVDSLVHMKHISDLTTDDPFD 253
D+ W+++ KL+ + RAS+ T A G S SDL+ +DPFD
Sbjct: 489 DQA---WVDEMRAKLRPLAMAKRASKNPTLLIVALEG-GSAWSFHRASDLSVNDPFD 541
>Os07g0286100 Cyclin-like F-box domain containing protein
Length = 340
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 62/86 (72%), Gaps = 7/86 (8%)
Query: 42 EVIVEDAPLLERLT---PHTIWQGDFVIRVIQAPKLKTLGYLSHKITTLELGTMVFQKMV 98
E+++EDAP LERL PH+ G +RV++AP+LK LGYLS KIT L+LGT++ Q+ +
Sbjct: 255 ELVIEDAPCLERLMLLDPHS---GPKNVRVVRAPQLKVLGYLSDKITKLDLGTVIIQETM 311
Query: 99 PVSLSNVMRSVKILALDTT-PDLDVV 123
VS + +R+VK+L L++ P+LD +
Sbjct: 312 VVSSTASLRTVKVLVLESAGPNLDTI 337
>Os01g0596100 Cyclin-like F-box domain containing protein
Length = 520
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 113/240 (47%), Gaps = 35/240 (14%)
Query: 41 EEVIVEDAPLLERLTPHTIWQGD---FVIRVIQAPKLKTLGYLSHKITTLELGTMVFQKM 97
E++ V DAP LERL +++ D + + AP L+ LGYL I LE G + +
Sbjct: 288 EDIAVVDAPRLERLLIWEMFEDDNHATRLSIGHAPNLQLLGYLRPGIHVLENGNTIIKAG 347
Query: 98 VPVSLSNVMRSVKILAL----DTTPDLDVVIDFIKCFPCVEKLYIVA------FNQGNLK 147
S ++ S+ +LAL + + ++ F++CFP VEKL++ + + NLK
Sbjct: 348 TKASPRTIIPSINVLALKVRFEVRNEAKLLPSFLRCFPNVEKLHVKSEKSDEPVGRLNLK 407
Query: 148 NIRRNVSLECFDLHLKMVEFINYQGNMLDLNFIRFFVLNARVLECIKLV------ARRDK 201
+ +EC +K V F Y+G+ +L F+++ + + +VL+ + +V + +D+
Sbjct: 408 FWQEAGRIECLQSCIKYVVFHGYRGDRSELTFLKYILGSGQVLQEMVIVVANGMFSTQDE 467
Query: 202 CEAKWIEKQNQKLQLYGRASRRVTFDFQADYGVDSLVH-------MKHISDLTTDDPFDR 254
K ++ + G + V V+ VH ++ D + DDPFDR
Sbjct: 468 VGEKLVKPLSSVKMASGDCNITV---------VEGTVHDEEDSCCLRDAFDFSIDDPFDR 518
>Os01g0595700 Similar to Ribosomal RNA apurinic site specific lyase
Length = 536
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 83/161 (51%), Gaps = 9/161 (5%)
Query: 40 LEEVIVEDAPLLERLTPHTIWQGDFVIRVIQAPKLKTLGYLSHKITTLELGTMVFQKMVP 99
+ EV ++DAP +ERL I +++I AP+LK LGY + L++G+ V + +
Sbjct: 242 VREVHLDDAPNMERLLLEPIAGASTHVKIINAPRLKVLGYFDVGLHQLKIGSTVIKDGIK 301
Query: 100 VSLSNVMRSVKILALDTT----PDLDVVIDFIKCFPCVEKLYIVAFNQGNLKNIRRNV-- 153
V S ++R+++ LAL + +V ++CFPC+E LYI++ N+
Sbjct: 302 VKPSAMVRTLRTLALKVQFGVEEQVKLVPLLLRCFPCLETLYIMSVPSETPVNVGVEFWD 361
Query: 154 ---SLECFDLHLKMVEFINYQGNMLDLNFIRFFVLNARVLE 191
EC HL+ F +G +L F++F + A++LE
Sbjct: 362 LVGYTECVHSHLRKFVFQAARGKDSELAFVKFVMGRAQMLE 402
>Os01g0596000 Cyclin-like F-box domain containing protein
Length = 503
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 118/236 (50%), Gaps = 30/236 (12%)
Query: 40 LEEVIVEDAPLLERLTPHTIW------QGDFVIRVIQAPKLKTLGYLSHKITTLELGTMV 93
++E+ + DAP LERL +W + I + AP+L LGYL I L +G M+
Sbjct: 265 IDELAIVDAPCLERLI---LWGTYPCEEEPIKIEIGYAPQLTVLGYLDMGIHALHIGGMI 321
Query: 94 FQKMVP-VSLSNVMRSVKILALDTT----PDLDVVIDFIKCFPCVEKLYI---VAFNQGN 145
+ V VS + SVKIL ++ +++++ F++CFP VE L+I V + G
Sbjct: 322 IKAGVTDVSPMAKVPSVKILGINVNFEARKEMEILPSFLRCFPNVEALHIKYNVDESNGE 381
Query: 146 L--KNIRRNVSLECFDLHLKMVEFINYQGNMLDLNFIRFFVLNARVLECIKLVARRDKCE 203
L K + +EC + +K V F ++G +L FI+F + A++L+ K+V D
Sbjct: 382 LNSKFWQEVGHIECVESSIKKVVFDQFRGGANELEFIKFILERAQMLD--KMVFVVDPEN 439
Query: 204 AKWIEKQNQKLQL-----YGRASRRVTFDFQADY--GVDSLVHMKHISDLTTDDPF 252
+ ++++ ++ Y AS++ + Y G + +M+ SDL+ DPF
Sbjct: 440 SAFVDQAMSTMKSLASTDYTSASKKCSL-MMVGYRKGPPAFSYMR-ASDLSLSDPF 493
>Os04g0208600 Cyclin-like F-box domain containing protein
Length = 524
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 90/167 (53%), Gaps = 10/167 (5%)
Query: 41 EEVIVEDAPLLERLTPHTIWQGDFVIRVIQAPKLKTLGYLSHKITTLELGTMVFQKMVPV 100
++V V +AP LERL ++++ +AP L+ +GYL + LE+G + +
Sbjct: 285 QDVNVVNAPRLERLIMLYSCGSSMLVKIGRAPSLRAIGYLDLETHVLEIGDTIIKAGTRA 344
Query: 101 SLSNVMRSVKILAL----DTTPDLDVVIDFIKCFPCVEKLYIVA------FNQGNLKNIR 150
S S ++ SVKIL + + ++ F++CFP VE L++ + + NLK +
Sbjct: 345 SPSTMVPSVKILGIIVCFGVRNEAKMLPSFLRCFPNVETLHVESRKTDELTGKLNLKFWQ 404
Query: 151 RNVSLECFDLHLKMVEFINYQGNMLDLNFIRFFVLNARVLECIKLVA 197
++EC H+ ++ F ++ ++NF++F + +AR+L+ + +V+
Sbjct: 405 DAGAIECIQSHITVMIFRRFRATRGEINFLKFVLESARMLKKLIIVS 451
>Os01g0706300
Length = 433
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 77/161 (47%), Gaps = 18/161 (11%)
Query: 47 DAPLLERLTPHTIWQGD-----FVIRVIQAPKLKTLGYLSHKITTLELGTMVFQKMVPVS 101
DAP L+RL IW + I++ A L++LGYL L++GT + +
Sbjct: 186 DAPCLDRLLLSDIWATEGRKFSTRIKIGLAQGLRSLGYLEPGRHLLQIGTTTIKARTRAT 245
Query: 102 LSNVMRSVKILAL----DTTPDLDVVIDFIKCFPCVEKLYIVAFNQGNLKNI-------- 149
S ++ SV+ILAL T + ++ F++CFP VE L++ + L N
Sbjct: 246 PSTMVPSVRILALKVYFGTLNEAQMLCSFLQCFPNVETLHLKSDKADELNNATGEHKAMF 305
Query: 150 -RRNVSLECFDLHLKMVEFINYQGNMLDLNFIRFFVLNARV 189
+ +EC H+K + F +QG +L FI+F + A+
Sbjct: 306 WKGAGEIECIKSHVKKMVFDEFQGKQSELAFIKFVMERAQA 346
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.326 0.141 0.433
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 8,074,571
Number of extensions: 293677
Number of successful extensions: 884
Number of sequences better than 1.0e-10: 25
Number of HSP's gapped: 840
Number of HSP's successfully gapped: 25
Length of query: 265
Length of database: 17,035,801
Length adjustment: 99
Effective length of query: 166
Effective length of database: 11,866,615
Effective search space: 1969858090
Effective search space used: 1969858090
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 155 (64.3 bits)