Os07g0285200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
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Os07g0285200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin-like F-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 96.19 | 0.461 | 7.51 | 0.496 | 0.654 | 1.92 | 0.511 | -0.746 | 0.185 | 18.5 | 15.2 | 11 | -- | -- |
| 96.66 | 0.458 | 7.5 | 0.598 | 0.649 | 2 | 0.478 | -- | 0.213 | 18.6 | 14.31 | 10 | -- | -- |
| 96.8 | 0.458 | 7.51 | 0.501 | 0.658 | 1.92 | -- | -0.688 | 0.189 | 18.4 | 15.2 | 11 | -- | -- |
| 97.17 | 0.459 | 7.5 | 0.597 | 0.655 | 1.96 | -- | -- | 0.218 | 18.3 | 13.8 | 11 | -- | -- |
| 109.63 | 0.488 | 7.51 | 0.397 | -- | 2.36 | -- | -0.53 | 0.136 | -- | 14.8 | 140 | -- | -- |
| 133.67 | 0.542 | 7.44 | 0.979 | 1.05 | -- | 0.295 | -- | 0.495 | 16.6 | -- | -- | -- | -- |
| 133.89 | 0.542 | 7.44 | 0.981 | 1.06 | -- | -- | -- | 0.497 | 16.5 | -- | -- | -- | -- |
| 109.87 | 0.488 | 7.5 | 0.471 | -- | 2.41 | -- | -- | 0.154 | -- | 11.02 | 141 | -- | -- |
| 105.57 | 0.479 | 7.52 | -- | 0.594 | 2.27 | -- | -- | 0.116 | 18.8 | 13.09 | 22 | -- | -- |
| 193.36 | 0.65 | 7.43 | 0.94 | -- | -- | -- | -- | 0.469 | -- | -- | -- | -- | -- |
| 159.27 | 0.59 | 7.46 | -- | 1.04 | -- | -- | -- | 0.388 | 16.5 | -- | -- | -- | -- |
| 115.32 | 0.5 | 7.51 | -- | -- | 2.56 | -- | -- | 0.0856 | -- | 9.979 | 148 | -- | -- |
| 216.69 | 0.687 | 7.45 | -- | -- | -- | -- | -- | 0.365 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 90.80 | temperature | 15 | 10 | > th | dose dependent | rect. | 6 | 23 |
| 2 | 91.44 | temperature | 15 | 90 | > th | dose dependent | rect. | 6 | 23 |
| 9 | 93.17 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 21 |
| 28 | 95.08 | temperature | 10 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 38 | 96.00 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 23 |
| 40 | 96.07 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 44 | 96.20 | temperature | 15 | 10 | > th | dose dependent | no | NA | NA |
| 46 | 96.21 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 22 |
| 51 | 96.34 | temperature | 15 | 90 | > th | dose dependent | no | NA | NA |
| 61 | 96.56 | temperature | 10 | 90 | > th | dose dependent | sin | 5 | NA |
| 65 | 96.62 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 20 |
| 67 | 96.65 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 76 | 97.08 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 22 |
| 92 | 97.44 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 112 | 97.89 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 123 | 98.14 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 18 |
| 148 | 98.42 | temperature | 30 | 90 | < th | dose dependent | sin | 6 | NA |
| 166 | 98.70 | temperature | 30 | 270 | < th | dose dependent | sin | 8 | NA |
| 195 | 99.25 | temperature | 15 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 200 | 99.31 | temperature | 15 | 90 | > th | dose dependent | rect. | 21 | 23 |
| 208 | 99.41 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 214 | 99.55 | temperature | 15 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 255 | 99.99 | temperature | 15 | 270 | > th | dose dependent | rect. | 21 | 14 |
| 410 | 101.91 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 411 | 101.92 | temperature | 15 | 270 | > th | dose dependent | rect. | 21 | 16 |
| 462 | 102.35 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 521 | 103.00 | temperature | 15 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 528 | 103.04 | temperature | 15 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 578 | 103.38 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 622 | 103.62 | temperature | 10 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 628 | 103.65 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 17 |
| 638 | 103.70 | temperature | 25 | 270 | < th | dose independent | rect. | 24 | 21 |
| 659 | 103.80 | temperature | 15 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 726 | 104.17 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 12 |
| 734 | 104.19 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 12 |
| 743 | 104.23 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 785 | 104.40 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 9 |
| 801 | 104.47 | temperature | 10 | 1440 | > th | dose dependent | rect. | 24 | 5 |
| 806 | 104.48 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 6 |
| 820 | 104.51 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 833 | 104.53 | temperature | 25 | 1440 | < th | dose dependent | sin | 12 | NA |
| 875 | 104.60 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 19 |
| 904 | 104.66 | temperature | 30 | 1440 | < th | dose dependent | rect. | 24 | 5 |
| 918 | 104.70 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 16 |
| 976 | 104.84 | temperature | 20 | 270 | > th | dose independent | rect. | 5 | 22 |