BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os12g0115300 Os12g0115300|AK059737
         (118 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os12g0115300  Plant lipid transfer protein/Par allergen fami...   185   6e-48
Os11g0116000  Similar to Nonspecific lipid-transfer protein ...   181   9e-47
AK070192                                                          181   9e-47
AK061740                                                          170   2e-43
Os11g0116200  Similar to Nonspecific lipid-transfer protein ...   165   8e-42
Os12g0115500  Plant lipid transfer protein/Par allergen fami...   137   2e-33
AK059819                                                          106   3e-24
Os12g0115000  Similar to Lipid transfer protein LPT II            106   4e-24
Os11g0427800  Similar to Lipid transfer protein LPT III           103   3e-23
Os12g0115100  Nonspecific lipid-transfer protein 1 precursor...   102   9e-23
AK059808                                                          102   9e-23
Os11g0115400  Lipid transfer protein LPT IV                       100   2e-22
Os12g0114500  Similar to Nonspecific lipid-transfer protein ...    98   1e-21
AK102455                                                           98   1e-21
Os12g0114800  Similar to Lipid transfer protein                    97   2e-21
Os11g0115100  Similar to Lipid transfer protein                    97   2e-21
Os11g0114900  Similar to Nonspecific lipid-transfer protein ...    96   5e-21
Os05g0477900  Similar to Nonspecific lipid-transfer protein ...    76   4e-15
Os08g0131200  Plant lipid transfer protein/Par allergen fami...    75   1e-14
AK058805                                                           74   2e-14
Os01g0219500  Plant lipid transfer protein/Par allergen fami...    70   2e-13
Os06g0539500                                                       69   7e-13
Os02g0445300                                                       67   3e-12
>Os12g0115300 Plant lipid transfer protein/Par allergen family protein
          Length = 118

 Score =  185 bits (470), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 98/118 (83%), Positives = 98/118 (83%)

Query: 1   MAALNFKXXXXXXXXXXXXXXXXXXXXITCGQVGSAIAPCISYVTGRGGLTQGCCNGVKG 60
           MAALNFK                    ITCGQVGSAIAPCISYVTGRGGLTQGCCNGVKG
Sbjct: 1   MAALNFKAVAAVMVMAMVVAAPGASAAITCGQVGSAIAPCISYVTGRGGLTQGCCNGVKG 60

Query: 61  LNNAARTTADRQAACRCLKTLAGTIKSLNLGAAAGIPGKCGVNVGFPISLSTDCSKVS 118
           LNNAARTTADRQAACRCLKTLAGTIKSLNLGAAAGIPGKCGVNVGFPISLSTDCSKVS
Sbjct: 61  LNNAARTTADRQAACRCLKTLAGTIKSLNLGAAAGIPGKCGVNVGFPISLSTDCSKVS 118
>Os11g0116000 Similar to Nonspecific lipid-transfer protein 1 (LTP 1) (Major
           allergen Pru d 3)
          Length = 118

 Score =  181 bits (460), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 97/118 (82%), Positives = 97/118 (82%)

Query: 1   MAALNFKXXXXXXXXXXXXXXXXXXXXITCGQVGSAIAPCISYVTGRGGLTQGCCNGVKG 60
           MAALN K                    ITCGQVGSAIAPCISYVTGRGGLTQGCCNGVKG
Sbjct: 1   MAALNGKVVVAVMVVAMVVAAPGASAAITCGQVGSAIAPCISYVTGRGGLTQGCCNGVKG 60

Query: 61  LNNAARTTADRQAACRCLKTLAGTIKSLNLGAAAGIPGKCGVNVGFPISLSTDCSKVS 118
           LNNAARTTADRQAACRCLKTLAGTIKSLNLGAAAGIPGKCGVNVGFPISLSTDCSKVS
Sbjct: 61  LNNAARTTADRQAACRCLKTLAGTIKSLNLGAAAGIPGKCGVNVGFPISLSTDCSKVS 118
>AK070192 
          Length = 118

 Score =  181 bits (460), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 97/118 (82%), Positives = 97/118 (82%)

Query: 1   MAALNFKXXXXXXXXXXXXXXXXXXXXITCGQVGSAIAPCISYVTGRGGLTQGCCNGVKG 60
           MAALN K                    ITCGQVGSAIAPCISYVTGRGGLTQGCCNGVKG
Sbjct: 1   MAALNGKVVVAVMVVAMVVAAPGASAAITCGQVGSAIAPCISYVTGRGGLTQGCCNGVKG 60

Query: 61  LNNAARTTADRQAACRCLKTLAGTIKSLNLGAAAGIPGKCGVNVGFPISLSTDCSKVS 118
           LNNAARTTADRQAACRCLKTLAGTIKSLNLGAAAGIPGKCGVNVGFPISLSTDCSKVS
Sbjct: 61  LNNAARTTADRQAACRCLKTLAGTIKSLNLGAAAGIPGKCGVNVGFPISLSTDCSKVS 118
>AK061740 
          Length = 118

 Score =  170 bits (431), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 89/118 (75%), Positives = 94/118 (79%)

Query: 1   MAALNFKXXXXXXXXXXXXXXXXXXXXITCGQVGSAIAPCISYVTGRGGLTQGCCNGVKG 60
           MAA+N K                    ITCGQVGSAIAPCISYVTGR GLTQGCCNGVKG
Sbjct: 1   MAAVNCKVVVAVIVVAMVVAAPGASAAITCGQVGSAIAPCISYVTGRSGLTQGCCNGVKG 60

Query: 61  LNNAARTTADRQAACRCLKTLAGTIKSLNLGAAAGIPGKCGVNVGFPISLSTDCSKVS 118
           LNNAARTTADRQAACRCLK+LAG+IKSLNLG  AG+PGKCGVNVGFPISLSTDC+KVS
Sbjct: 61  LNNAARTTADRQAACRCLKSLAGSIKSLNLGTVAGVPGKCGVNVGFPISLSTDCNKVS 118
>Os11g0116200 Similar to Nonspecific lipid-transfer protein 1 (LTP 1) (Major
           allergen Pru d 3)
          Length = 132

 Score =  165 bits (417), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 86/115 (74%), Positives = 91/115 (79%)

Query: 1   MAALNFKXXXXXXXXXXXXXXXXXXXXITCGQVGSAIAPCISYVTGRGGLTQGCCNGVKG 60
           MAA+N K                    ITCGQVGSAIAPCISYVTGR GLTQGCCNGVKG
Sbjct: 1   MAAVNCKVVVAVIVVAMVVAAPGASAAITCGQVGSAIAPCISYVTGRSGLTQGCCNGVKG 60

Query: 61  LNNAARTTADRQAACRCLKTLAGTIKSLNLGAAAGIPGKCGVNVGFPISLSTDCS 115
           LNNAARTTADRQAACRCLK+LAG+IKSLNLG  AG+PGKCGVNVGFPISLSTDC+
Sbjct: 61  LNNAARTTADRQAACRCLKSLAGSIKSLNLGTVAGVPGKCGVNVGFPISLSTDCN 115
>Os12g0115500 Plant lipid transfer protein/Par allergen family protein
          Length = 93

 Score =  137 bits (344), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 68/82 (82%), Positives = 73/82 (89%)

Query: 37  IAPCISYVTGRGGLTQGCCNGVKGLNNAARTTADRQAACRCLKTLAGTIKSLNLGAAAGI 96
           I   I  + GR GLTQGCCNGVKGLNNAARTTADRQAACRCLK+LAG+IKSLNLG  AG+
Sbjct: 12  IKSVILNMAGRSGLTQGCCNGVKGLNNAARTTADRQAACRCLKSLAGSIKSLNLGTVAGV 71

Query: 97  PGKCGVNVGFPISLSTDCSKVS 118
           PGKCGVNVGFPISLSTDC+KVS
Sbjct: 72  PGKCGVNVGFPISLSTDCNKVS 93
>AK059819 
          Length = 117

 Score =  106 bits (265), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 52/90 (57%), Positives = 66/90 (73%)

Query: 28  ITCGQVGSAIAPCISYVTGRGGLTQGCCNGVKGLNNAARTTADRQAACRCLKTLAGTIKS 87
           I+CGQV SA++PC+SY  G  G +  CC+GV+ LN+AA TTADR+ AC CLK +AG+I  
Sbjct: 27  ISCGQVNSAVSPCLSYARGGSGPSAACCSGVRSLNSAATTTADRRTACNCLKNVAGSISG 86

Query: 88  LNLGAAAGIPGKCGVNVGFPISLSTDCSKV 117
           LN G AA IP KCGV++ + IS S DCS V
Sbjct: 87  LNAGNAASIPSKCGVSIPYTISPSIDCSSV 116
>Os12g0115000 Similar to Lipid transfer protein LPT II
          Length = 110

 Score =  106 bits (264), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 52/90 (57%), Positives = 66/90 (73%)

Query: 28  ITCGQVGSAIAPCISYVTGRGGLTQGCCNGVKGLNNAARTTADRQAACRCLKTLAGTIKS 87
           I+CGQV SA++PC+SY  G  G +  CC+GV+ LN+AA TTADR+ AC CLK +AG+I  
Sbjct: 20  ISCGQVNSAVSPCLSYARGGSGPSAACCSGVRSLNSAATTTADRRTACNCLKNVAGSISG 79

Query: 88  LNLGAAAGIPGKCGVNVGFPISLSTDCSKV 117
           LN G AA IP KCGV++ + IS S DCS V
Sbjct: 80  LNAGNAASIPSKCGVSIPYTISPSIDCSSV 109
>Os11g0427800 Similar to Lipid transfer protein LPT III
          Length = 117

 Score =  103 bits (256), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 55/91 (60%), Positives = 65/91 (71%), Gaps = 1/91 (1%)

Query: 28  ITCGQVGSAIAPCISYVTGRG-GLTQGCCNGVKGLNNAARTTADRQAACRCLKTLAGTIK 86
           ITCGQV SA+ PC++Y  G G G +  CCNGV+ L +AARTTADR+ AC CLK  A  IK
Sbjct: 26  ITCGQVNSAVGPCLTYARGGGAGPSAACCNGVRSLKSAARTTADRRTACNCLKNAARGIK 85

Query: 87  SLNLGAAAGIPGKCGVNVGFPISLSTDCSKV 117
            LN G AA IP KCGV+V + IS S DCS+V
Sbjct: 86  GLNAGNAASIPSKCGVSVPYTISASIDCSRV 116
>Os12g0115100 Nonspecific lipid-transfer protein 1 precursor (LTP 1) (PAPI)
          Length = 116

 Score =  102 bits (253), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 53/91 (58%), Positives = 63/91 (69%)

Query: 28  ITCGQVGSAIAPCISYVTGRGGLTQGCCNGVKGLNNAARTTADRQAACRCLKTLAGTIKS 87
           ITCGQV SA+ PC++Y  G  G +  CC+GV+ L  AA TTADR+ AC CLK  A  IK 
Sbjct: 26  ITCGQVNSAVGPCLTYARGGAGPSAACCSGVRSLKAAASTTADRRTACNCLKNAARGIKG 85

Query: 88  LNLGAAAGIPGKCGVNVGFPISLSTDCSKVS 118
           LN G AA IP KCGV+V + IS S DCS+VS
Sbjct: 86  LNAGNAASIPSKCGVSVPYTISASIDCSRVS 116
>AK059808 
          Length = 116

 Score =  102 bits (253), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 53/91 (58%), Positives = 63/91 (69%)

Query: 28  ITCGQVGSAIAPCISYVTGRGGLTQGCCNGVKGLNNAARTTADRQAACRCLKTLAGTIKS 87
           ITCGQV SA+ PC++Y  G  G +  CC+GV+ L  AA TTADR+ AC CLK  A  IK 
Sbjct: 26  ITCGQVNSAVGPCLTYARGGAGPSAACCSGVRSLKAAASTTADRRTACNCLKNAARGIKG 85

Query: 88  LNLGAAAGIPGKCGVNVGFPISLSTDCSKVS 118
           LN G AA IP KCGV+V + IS S DCS+VS
Sbjct: 86  LNAGNAASIPSKCGVSVPYTISASIDCSRVS 116
>Os11g0115400 Lipid transfer protein LPT IV
          Length = 116

 Score =  100 bits (250), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 52/91 (57%), Positives = 63/91 (69%)

Query: 28  ITCGQVGSAIAPCISYVTGRGGLTQGCCNGVKGLNNAARTTADRQAACRCLKTLAGTIKS 87
           ITCGQV SA+ PC++Y  G  G +  CC+GV+ L  AA +TADR+ AC CLK  A  IK 
Sbjct: 26  ITCGQVNSAVGPCLTYARGGAGPSAACCSGVRSLKAAASSTADRRTACNCLKNAARGIKG 85

Query: 88  LNLGAAAGIPGKCGVNVGFPISLSTDCSKVS 118
           LN G AA IP KCGV+V + IS S DCS+VS
Sbjct: 86  LNAGNAASIPSKCGVSVPYTISASIDCSRVS 116
>Os12g0114500 Similar to Nonspecific lipid-transfer protein (LTP) (Fragment)
          Length = 119

 Score = 97.8 bits (242), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 52/90 (57%), Positives = 60/90 (66%), Gaps = 1/90 (1%)

Query: 29  TCGQVGSAIAPCISYVTGR-GGLTQGCCNGVKGLNNAARTTADRQAACRCLKTLAGTIKS 87
           TCGQV S +APCI Y TGR    T GCC+GV+ LN+AA TTADRQ  C CLK     +  
Sbjct: 29  TCGQVVSMLAPCIMYATGRVSAPTGGCCDGVRTLNSAAATTADRQTTCACLKQQTSAMGG 88

Query: 88  LNLGAAAGIPGKCGVNVGFPISLSTDCSKV 117
           L     AGIP KCGVN+ + IS STDCS+V
Sbjct: 89  LRPDLVAGIPSKCGVNIPYAISPSTDCSRV 118
>AK102455 
          Length = 119

 Score = 97.8 bits (242), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 52/90 (57%), Positives = 60/90 (66%), Gaps = 1/90 (1%)

Query: 29  TCGQVGSAIAPCISYVTGR-GGLTQGCCNGVKGLNNAARTTADRQAACRCLKTLAGTIKS 87
           TCGQV S +APCI Y TGR    T GCC+GV+ LN+AA TTADRQ  C CLK     +  
Sbjct: 29  TCGQVVSMLAPCIMYATGRVSAPTGGCCDGVRTLNSAAATTADRQTTCACLKQQTSAMGG 88

Query: 88  LNLGAAAGIPGKCGVNVGFPISLSTDCSKV 117
           L     AGIP KCGVN+ + IS STDCS+V
Sbjct: 89  LRPDLVAGIPSKCGVNIPYAISPSTDCSRV 118
>Os12g0114800 Similar to Lipid transfer protein
          Length = 121

 Score = 97.4 bits (241), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 49/90 (54%), Positives = 63/90 (70%), Gaps = 1/90 (1%)

Query: 29  TCGQVGSAIAPCISYVTGRGGLTQGCCN-GVKGLNNAARTTADRQAACRCLKTLAGTIKS 87
           +CG V S+IAPC+SYV GR       C  GV+ LN  A ++ADR+ AC CLK +A + ++
Sbjct: 31  SCGDVTSSIAPCLSYVMGRESSPSSSCCSGVRTLNGKASSSADRRTACSCLKNMASSFRN 90

Query: 88  LNLGAAAGIPGKCGVNVGFPISLSTDCSKV 117
           LN+G AA IP KCGV+V FPIS S DCSK+
Sbjct: 91  LNMGNAASIPSKCGVSVAFPISTSVDCSKI 120
>Os11g0115100 Similar to Lipid transfer protein
          Length = 121

 Score = 97.4 bits (241), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 49/90 (54%), Positives = 63/90 (70%), Gaps = 1/90 (1%)

Query: 29  TCGQVGSAIAPCISYVTGRGGLTQGCCN-GVKGLNNAARTTADRQAACRCLKTLAGTIKS 87
           +CG V S+IAPC+SYV GR       C  GV+ LN  A ++ADR+ AC CLK +A + ++
Sbjct: 31  SCGDVTSSIAPCLSYVMGRESSPSSSCCSGVRTLNGKASSSADRRTACSCLKNMASSFRN 90

Query: 88  LNLGAAAGIPGKCGVNVGFPISLSTDCSKV 117
           LN+G AA IP KCGV+V FPIS S DCSK+
Sbjct: 91  LNMGNAASIPSKCGVSVAFPISTSVDCSKI 120
>Os11g0114900 Similar to Nonspecific lipid-transfer protein (LTP) (Fragment)
          Length = 119

 Score = 95.9 bits (237), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 51/90 (56%), Positives = 59/90 (65%), Gaps = 1/90 (1%)

Query: 29  TCGQVGSAIAPCISYVTGR-GGLTQGCCNGVKGLNNAARTTADRQAACRCLKTLAGTIKS 87
           TCGQV S +APCI Y TGR    T GCC+GV+ LN+AA TTADRQ  C CLK     +  
Sbjct: 29  TCGQVVSMLAPCIMYATGRVSAPTGGCCDGVRTLNSAAATTADRQTTCACLKQQTSAMGG 88

Query: 88  LNLGAAAGIPGKCGVNVGFPISLSTDCSKV 117
           L     AGIP KC VN+ + IS STDCS+V
Sbjct: 89  LRPDLVAGIPSKCDVNIPYAISPSTDCSRV 118
>Os05g0477900 Similar to Nonspecific lipid-transfer protein 1 (LTP 1) (Major
           allergen Pru d 3)
          Length = 129

 Score = 76.3 bits (186), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 58/91 (63%), Gaps = 1/91 (1%)

Query: 28  ITCGQVGSAIAPCISYVTGRGGLTQGCCNGVKGLNNAARTTADRQAACRCLKTL-AGTIK 86
           ++C  V + + PC+ YV   G +   CC G++ +  AARTTADR+AAC CLK + AG   
Sbjct: 38  LSCSTVYNTLLPCLPYVQSGGAVPAACCGGIRSVVAAARTTADRRAACTCLKNVAAGAAG 97

Query: 87  SLNLGAAAGIPGKCGVNVGFPISLSTDCSKV 117
              +  AAG+PG+CGV+V F IS + +C+ V
Sbjct: 98  GPYISRAAGLPGRCGVSVPFKISPNVNCNAV 128
>Os08g0131200 Plant lipid transfer protein/Par allergen family protein
          Length = 120

 Score = 75.1 bits (183), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 53/91 (58%), Gaps = 1/91 (1%)

Query: 28  ITCGQVGSAIAPCISYVTGRGGLTQG-CCNGVKGLNNAARTTADRQAACRCLKTLAGTIK 86
           +TCG V +++ PC++Y+TG+     G CC GV+ L      TA+R+ AC C+K  A   K
Sbjct: 29  VTCGDVDASLLPCVAYLTGKAAAPSGDCCAGVRHLRTLPVGTAERRFACDCVKKAAARFK 88

Query: 87  SLNLGAAAGIPGKCGVNVGFPISLSTDCSKV 117
            LN  A   +P KC   + FP+SL  DC+ +
Sbjct: 89  GLNGDAIRDLPAKCAAPLPFPLSLDFDCNTI 119
>AK058805 
          Length = 75

 Score = 73.9 bits (180), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/83 (50%), Positives = 51/83 (61%), Gaps = 10/83 (12%)

Query: 36  AIAPCISYVTGRGGLTQGCCNGVKGLNNAARTTADRQAACRCLKTLAGTIKSLNLGAAAG 95
           A+ PC++Y  G          GV+ L  AA +TADR+ AC CLK  A  IK LN G AA 
Sbjct: 3   ALGPCLTYARG----------GVRSLKAAASSTADRRTACNCLKNAARGIKGLNAGNAAS 52

Query: 96  IPGKCGVNVGFPISLSTDCSKVS 118
           IP KCGV+V + IS S DCS+VS
Sbjct: 53  IPSKCGVSVPYTISASIDCSRVS 75
>Os01g0219500 Plant lipid transfer protein/Par allergen family protein
          Length = 127

 Score = 70.5 bits (171), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 2/93 (2%)

Query: 28  ITCGQVGSAIAPCISYVTGRGGLTQG--CCNGVKGLNNAARTTADRQAACRCLKTLAGTI 85
           + CGQV   +APC+ Y+ G  G+T    CC+ +  LN  A   ADR A C C+K  A   
Sbjct: 30  VQCGQVMQLMAPCMPYLAGAPGMTPYGICCDSLGVLNRMAPAPADRVAVCNCVKDAAAGF 89

Query: 86  KSLNLGAAAGIPGKCGVNVGFPISLSTDCSKVS 118
            +++   A+ +P  CG+++ F I+ + DC++V+
Sbjct: 90  PAVDFSRASALPAACGLSISFTIAPNMDCNQVT 122
>Os06g0539500 
          Length = 136

 Score = 68.9 bits (167), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 53/91 (58%), Gaps = 2/91 (2%)

Query: 28  ITCGQVGSAIAPCISYVTGRGGLTQG-CCNGVKGLNNAARTTADRQAACRCLKT-LAGTI 85
           ++C  V + + PC+ ++ G      G CC+G+ GL  AA TT DRQAAC CLK+ ++G  
Sbjct: 46  VSCSDVVADVTPCLGFLQGDDDHPSGECCDGLSGLVAAAATTEDRQAACECLKSAVSGQF 105

Query: 86  KSLNLGAAAGIPGKCGVNVGFPISLSTDCSK 116
            ++    A  +P  CG+++ +  S   DCS+
Sbjct: 106 TAVEAAPARDLPADCGLSLPYTFSPDVDCSQ 136
>Os02g0445300 
          Length = 75

 Score = 67.0 bits (162), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 38/76 (50%), Positives = 46/76 (60%), Gaps = 4/76 (5%)

Query: 43  YVTGR-GGLTQGCCNGVKGLNNAARTTADRQAACRCLKTLAGTIKSLNLGAAAGIPGKCG 101
           Y TGR    T GCC+GV+ LN+AA   AD Q  C C+K     +  L     AGIP KCG
Sbjct: 2   YATGRVSAPTGGCCDGVRTLNSAA---ADHQTTCACIKQQTSGMGGLRPDLVAGIPSKCG 58

Query: 102 VNVGFPISLSTDCSKV 117
           VN+ + IS STDCS+V
Sbjct: 59  VNIPYAISPSTDCSRV 74
  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.320    0.134    0.416 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 3,031,677
Number of extensions: 93426
Number of successful extensions: 293
Number of sequences better than 1.0e-10: 24
Number of HSP's gapped: 284
Number of HSP's successfully gapped: 24
Length of query: 118
Length of database: 17,035,801
Length adjustment: 85
Effective length of query: 33
Effective length of database: 12,597,611
Effective search space: 415721163
Effective search space used: 415721163
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 149 (62.0 bits)