Os12g0115500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Plant lipid transfer protein/Par allergen family protein.
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Os12g0115500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Plant lipid transfer protein/Par allergen family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 112.5 | 0.498 | 15.8 | -0.598 | 0.0279 | -2.53 | 1.59 | -3.66 | 0.123 | 5.62 | 1.318 | 4318 | -- | -- |
| 135.13 | 0.541 | 15.8 | -0.705 | 0.0198 | -1.81 | 1.66 | -- | 0.187 | 5.45 | 2.893 | 7225 | -- | -- |
| 118.74 | 0.508 | 15.8 | -0.579 | 0.0352 | -2.52 | -- | -3.65 | 0.122 | 5.53 | 1.372 | 4317 | -- | -- |
| 132.42 | 0.536 | 15.9 | -1.21 | 0.312 | -2.29 | -- | -- | -0.0251 | 2.98 | 2.709 | 7345 | -- | -- |
| 118.81 | 0.508 | 15.8 | -0.576 | -- | -2.52 | -- | -3.66 | 0.123 | -- | 1.37 | 4317 | -- | -- |
| 203.08 | 0.668 | 15.8 | -0.688 | 0.0761 | -- | 1.72 | -- | 0.417 | 5.28 | -- | -- | -- | -- |
| 210.31 | 0.679 | 15.8 | -0.687 | 0.0992 | -- | -- | -- | 0.408 | 3.22 | -- | -- | -- | -- |
| 126.95 | 0.525 | 16 | -1.1 | -- | -1.97 | -- | -- | -0.126 | -- | 2.673 | 4327 | -- | -- |
| 160.98 | 0.591 | 15.9 | -- | 0.288 | -2.01 | -- | -- | -0.0233 | 2.19 | 3.693 | 7353 | -- | -- |
| 210.87 | 0.679 | 15.8 | -0.683 | -- | -- | -- | -- | 0.411 | -- | -- | -- | -- | -- |
| 222.75 | 0.698 | 15.8 | -- | 0.0856 | -- | -- | -- | 0.485 | 3.21 | -- | -- | -- | -- |
| 159.02 | 0.587 | 15.9 | -- | -- | -1.98 | -- | -- | 0.00815 | -- | 3.966 | 8650 | -- | -- |
| 223.17 | 0.697 | 15.8 | -- | -- | -- | -- | -- | 0.487 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 96.56 | humidity | 90 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 2 | 97.49 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 14 |
| 4 | 97.72 | humidity | 90 | 43200 | > th | dose dependent | rect. | 19 | 4 |
| 9 | 97.87 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 14 |
| 14 | 97.97 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 20 |
| 16 | 98.04 | radiation | 1 | 43200 | < th | dose independent | rect. | 5 | 3 |
| 20 | 98.06 | radiation | 1 | 43200 | > th | dose independent | rect. | 5 | 3 |
| 29 | 98.21 | radiation | 1 | 43200 | > th | dose independent | sin | 11 | NA |
| 31 | 98.21 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 21 |
| 42 | 98.29 | humidity | 90 | 43200 | > th | dose dependent | rect. | 22 | 1 |
| 64 | 98.36 | radiation | 1 | 43200 | < th | dose independent | sin | 10 | NA |
| 77 | 98.38 | radiation | 1 | 43200 | > th | dose independent | rect. | 13 | 22 |
| 111 | 98.43 | humidity | 90 | 43200 | > th | dose dependent | rect. | 5 | 19 |
| 119 | 98.47 | radiation | 1 | 43200 | > th | dose independent | rect. | 6 | 13 |
| 128 | 98.47 | radiation | 1 | 43200 | < th | dose independent | rect. | 13 | 21 |
| 136 | 98.48 | radiation | 1 | 43200 | < th | dose independent | rect. | 6 | 15 |
| 153 | 98.49 | radiation | 1 | 43200 | < th | dose independent | rect. | 6 | 13 |
| 215 | 98.61 | radiation | 1 | 43200 | > th | dose independent | no | NA | NA |
| 306 | 98.66 | radiation | 1 | 43200 | < th | dose independent | no | NA | NA |
| 307 | 98.66 | radiation | 1 | 43200 | > th | dose independent | rect. | 5 | 9 |
| 308 | 98.66 | radiation | 1 | 43200 | < th | dose independent | rect. | 5 | 9 |
| 334 | 98.67 | radiation | 1 | 43200 | > th | dose independent | rect. | 10 | 23 |
| 544 | 99.15 | humidity | 90 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 581 | 99.20 | humidity | 90 | 43200 | > th | dose independent | rect. | 3 | 21 |
| 586 | 99.25 | radiation | 1 | 43200 | > th | dose independent | rect. | 17 | 2 |
| 632 | 99.40 | radiation | 1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 633 | 99.40 | humidity | 90 | 43200 | < th | dose independent | rect. | 20 | 3 |
| 677 | 99.56 | humidity | 90 | 43200 | > th | dose dependent | sin | 18 | NA |
| 681 | 99.59 | humidity | 90 | 43200 | > th | dose independent | rect. | 18 | 5 |
| 685 | 99.59 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 23 |
| 694 | 99.63 | radiation | 1 | 43200 | < th | dose dependent | rect. | 14 | 18 |
| 699 | 99.66 | radiation | 1 | 43200 | < th | dose dependent | rect. | 5 | 14 |
| 721 | 99.68 | humidity | 90 | 43200 | > th | dose independent | rect. | 9 | 15 |
| 737 | 99.72 | humidity | 90 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 738 | 99.72 | humidity | 90 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 768 | 99.76 | radiation | 1 | 43200 | < th | dose dependent | rect. | 14 | 6 |
| 774 | 99.76 | radiation | 1 | 43200 | < th | dose dependent | rect. | 9 | 23 |
| 836 | 99.80 | radiation | 1 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 861 | 99.81 | radiation | 1 | 43200 | < th | dose dependent | no | NA | NA |
| 880 | 99.82 | radiation | 1 | 43200 | < th | dose dependent | sin | 14 | NA |
| 904 | 99.85 | humidity | 90 | 43200 | < th | dose independent | rect. | 3 | 21 |
| 927 | 99.89 | humidity | 90 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 928 | 99.90 | humidity | 90 | 43200 | < th | dose independent | rect. | 6 | 19 |
| 948 | 99.94 | humidity | 90 | 43200 | < th | dose independent | rect. | 10 | 14 |
| 951 | 99.95 | humidity | 80 | 43200 | > th | dose independent | rect. | 8 | 10 |
| 952 | 99.95 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 13 |