Os11g0116000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Nonspecific lipid-transfer protein 1 (LTP 1) (Major allergen Pru d 3).
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Os11g0116000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Nonspecific lipid-transfer protein 1 (LTP 1) (Major allergen Pru d 3).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 80.01 | 0.42 | 15.7 | -0.348 | 0.0497 | -2.06 | -1.36 | -2.97 | 0.258 | 17.5 | 1.08 | 4304 | -- | -- |
| 92.05 | 0.447 | 15.7 | -0.309 | 0.0415 | -1.48 | -1.36 | -- | 0.219 | 16.8 | 3.069 | 7156 | -- | -- |
| 84.57 | 0.428 | 15.7 | -0.338 | 0.0413 | -2.06 | -- | -2.99 | 0.257 | 18.3 | 1.08 | 4304 | -- | -- |
| 91.85 | 0.446 | 15.8 | -0.482 | 0.041 | -1.46 | -- | -- | 0.205 | 17.8 | 2.611 | 4300 | -- | -- |
| 84.66 | 0.429 | 15.7 | -0.342 | -- | -2.07 | -- | -3 | 0.256 | -- | 1.08 | 4304 | -- | -- |
| 137.24 | 0.549 | 15.7 | -0.389 | 0.0031 | -- | -1.47 | -- | 0.487 | 17.1 | -- | -- | -- | -- |
| 142.13 | 0.558 | 15.7 | -0.392 | 0.0935 | -- | -- | -- | 0.48 | 23.2 | -- | -- | -- | -- |
| 91.84 | 0.446 | 15.8 | -0.505 | -- | -1.43 | -- | -- | 0.186 | -- | 2.742 | 4307 | -- | -- |
| 104.38 | 0.476 | 15.8 | -- | 0.00248 | -1.36 | -- | -- | 0.238 | 17.5 | 2.843 | 4297 | -- | -- |
| 142.68 | 0.558 | 15.7 | -0.39 | -- | -- | -- | -- | 0.481 | -- | -- | -- | -- | -- |
| 146.19 | 0.566 | 15.7 | -- | 0.09 | -- | -- | -- | 0.523 | 22.9 | -- | -- | -- | -- |
| 104.33 | 0.476 | 15.7 | -- | -- | -1.33 | -- | -- | 0.241 | -- | 2.889 | 4300 | -- | -- |
| 146.69 | 0.565 | 15.7 | -- | -- | -- | -- | -- | 0.524 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 69.32 | humidity | 90 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 2 | 70.27 | humidity | 80 | 43200 | > th | dose independent | rect. | 13 | 4 |
| 5 | 70.55 | humidity | 80 | 43200 | < th | dose independent | rect. | 13 | 4 |
| 10 | 70.68 | humidity | 70 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 13 | 70.72 | humidity | 80 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 19 | 70.88 | humidity | 90 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 26 | 71.01 | humidity | 80 | 43200 | < th | dose independent | rect. | 9 | 8 |
| 29 | 71.06 | humidity | 90 | 43200 | > th | dose dependent | rect. | 19 | 4 |
| 35 | 71.09 | humidity | 70 | 43200 | > th | dose dependent | rect. | 12 | 3 |
| 50 | 71.32 | humidity | 80 | 43200 | < th | dose independent | rect. | 8 | 10 |
| 52 | 71.33 | humidity | 90 | 43200 | > th | dose dependent | rect. | 17 | 7 |
| 74 | 71.49 | humidity | 90 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 85 | 71.63 | humidity | 90 | 43200 | > th | dose dependent | rect. | 22 | 1 |
| 100 | 71.96 | humidity | 90 | 43200 | > th | dose independent | rect. | 18 | 5 |
| 107 | 71.99 | humidity | 90 | 43200 | > th | dose dependent | rect. | 7 | 18 |
| 108 | 72.00 | humidity | 90 | 43200 | > th | dose independent | rect. | 11 | 13 |
| 121 | 72.07 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 21 |
| 123 | 72.08 | humidity | 90 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 126 | 72.08 | humidity | 80 | 43200 | > th | dose dependent | rect. | 12 | 8 |
| 135 | 72.14 | humidity | 90 | 43200 | > th | dose independent | rect. | 14 | 9 |
| 138 | 72.15 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 21 |
| 146 | 72.19 | humidity | 90 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 150 | 72.20 | radiation | 1 | 43200 | > th | dose independent | rect. | 6 | 13 |
| 151 | 72.20 | radiation | 1 | 43200 | < th | dose independent | rect. | 6 | 13 |
| 171 | 72.21 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 14 |
| 199 | 72.25 | radiation | 1 | 43200 | > th | dose independent | rect. | 12 | 23 |
| 219 | 72.28 | radiation | 1 | 43200 | < th | dose independent | rect. | 12 | 22 |
| 231 | 72.29 | humidity | 90 | 43200 | > th | dose dependent | sin | 18 | NA |
| 289 | 72.38 | radiation | 1 | 43200 | > th | dose independent | no | NA | NA |
| 337 | 72.39 | radiation | 1 | 43200 | < th | dose independent | no | NA | NA |
| 377 | 72.39 | radiation | 1 | 43200 | < th | dose independent | rect. | 20 | 23 |
| 384 | 72.39 | radiation | 1 | 43200 | < th | dose dependent | rect. | 14 | 12 |
| 388 | 72.40 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 14 |
| 396 | 72.40 | radiation | 1 | 43200 | < th | dose dependent | rect. | 14 | 5 |
| 406 | 72.42 | radiation | 1 | 43200 | < th | dose independent | sin | 23 | NA |
| 412 | 72.42 | radiation | 1 | 43200 | < th | dose dependent | sin | 17 | NA |
| 433 | 72.43 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 23 |
| 434 | 72.44 | radiation | 1 | 43200 | > th | dose independent | sin | 0 | NA |
| 441 | 72.44 | radiation | 1 | 43200 | < th | dose dependent | rect. | 9 | 17 |
| 453 | 72.45 | radiation | 1 | 43200 | < th | dose dependent | rect. | 9 | 10 |
| 498 | 72.47 | humidity | 90 | 43200 | < th | dose independent | rect. | 13 | 11 |
| 539 | 72.50 | radiation | 1 | 43200 | > th | dose independent | sin | 12 | NA |
| 609 | 72.55 | humidity | 90 | 43200 | > th | dose independent | rect. | 3 | 21 |
| 702 | 72.61 | radiation | 1 | 43200 | < th | dose dependent | rect. | 1 | 20 |
| 714 | 72.62 | radiation | 1 | 43200 | < th | dose dependent | no | NA | NA |
| 761 | 72.63 | radiation | 1 | 43200 | > th | dose independent | rect. | 5 | 10 |
| 762 | 72.63 | radiation | 1 | 43200 | < th | dose independent | rect. | 5 | 10 |
| 775 | 72.64 | radiation | 1 | 43200 | < th | dose independent | sin | 12 | NA |
| 805 | 72.68 | humidity | 90 | 43200 | > th | dose independent | sin | 19 | NA |
| 870 | 72.72 | radiation | 1 | 43200 | > th | dose independent | rect. | 17 | 2 |
| 969 | 72.78 | humidity | 90 | 43200 | < th | dose independent | rect. | 19 | 4 |
| 994 | 72.80 | humidity | 90 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 995 | 72.80 | radiation | 1 | 43200 | < th | dose independent | rect. | 13 | 6 |