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Os11g0116200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Nonspecific lipid-transfer protein 1 (LTP 1) (Major allergen Pru d 3).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 14.8 (0.0296) R2 : 0.522
β1 : -2.27 (0.119) R2dD : 0.526 R2D : 0.0911
β2 : -- (--) R2dC : -- R2C : --
β3 : -2.03 (0.118) R2dE : 0.513 R2E : -0.0127
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.469 (0.0723) R2dN8 : 0.0794 R2N8 : -0.155
σ : 0.528
deviance : 128.52
__
_____
C
peak time of C : --
E
wheather : radiation
threshold : 2.071
memory length : 17393
response mode : < th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
122.36 0.52 14.7 -1.23 0.243 -3.12 1.33 -4.84 -0.159 6.26 0.8299 10170 -- --
132.2 0.536 14.8 -1.81 0.211 -1.88 1.5 -- -0.243 5.87 2.696 11655 -- --
126.61 0.524 14.7 -1.18 0.249 -3.12 -- -4.92 -0.164 6.33 0.8797 10175 -- --
126.24 0.523 14.8 -2.06 0.28 -2.03 -- -- -0.341 5.1 2.265 16041 -- --
129.69 0.53 14.7 -1.15 -- -3.09 -- -4.81 -0.164 -- 1.032 10162 -- --
209.69 0.679 14.7 -1.32 0.283 -- 1.31 -- 0.13 7.01 -- -- -- --
213.73 0.685 14.7 -1.3 0.293 -- -- -- 0.129 8.11 -- -- -- --
128.52 0.528 14.8 -2.27 -- -2.03 -- -- -0.469 -- 2.071 17393 -- --
204.13 0.665 14.8 -- 0.315 -1.77 -- -- -0.183 5.47 5.67 8828 -- --
218.46 0.691 14.7 -1.29 -- -- -- -- 0.133 -- -- -- -- --
257.93 0.751 14.7 -- 0.287 -- -- -- 0.273 8.44 -- -- -- --
206.67 0.67 14.8 -- -- -1.74 -- -- -0.214 -- 5.67 8740 -- --
262.53 0.756 14.7 -- -- -- -- -- 0.276 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 107.30 humidity 90 43200 > th dose dependent rect. 20 1
3 108.92 humidity 90 43200 > th dose dependent rect. 19 4
5 108.96 humidity 90 43200 < th dose independent rect. 20 1
8 109.12 humidity 90 43200 > th dose independent rect. 20 1
13 109.82 humidity 90 43200 > th dose independent rect. 19 4
20 110.03 humidity 90 43200 > th dose independent rect. 3 20
22 110.06 humidity 90 43200 < th dose independent rect. 19 4
36 110.44 humidity 90 43200 > th dose dependent rect. 5 19
39 110.47 humidity 90 43200 < th dose independent rect. 3 20
41 110.53 humidity 90 43200 > th dose independent rect. 7 17
72 110.79 humidity 90 43200 < th dose independent rect. 22 1
73 110.80 humidity 90 43200 < th dose independent rect. 14 9
76 110.84 humidity 90 43200 > th dose independent rect. 22 1
80 110.88 humidity 90 43200 > th dose independent rect. 11 13
84 110.91 humidity 90 43200 < th dose independent rect. 6 19
111 111.11 humidity 90 43200 < th dose independent rect. 8 15
138 111.30 humidity 90 43200 > th dose dependent sin 19 NA
149 111.33 humidity 90 43200 > th dose dependent rect. 8 2
152 111.35 humidity 90 43200 < th dose independent sin 19 NA
167 111.44 humidity 90 43200 > th dose independent sin 19 NA
202 111.69 humidity 80 43200 > th dose independent rect. 8 10
242 111.92 humidity 80 43200 > th dose independent rect. 9 6
249 111.96 humidity 80 43200 > th dose dependent rect. 9 12
256 112.00 humidity 90 43200 > th dose independent rect. 9 1
262 112.03 radiation 1 43200 > th dose independent rect. 18 14
275 112.11 humidity 80 43200 > th dose independent rect. 12 5
283 112.13 humidity 80 43200 > th dose dependent rect. 9 6
285 112.14 wind 5 43200 > th dose independent rect. 11 1
291 112.16 radiation 1 43200 > th dose independent rect. 5 3
292 112.16 radiation 1 43200 < th dose independent rect. 5 3
305 112.22 humidity 90 43200 > th dose independent sin 3 NA
309 112.24 humidity 80 43200 < th dose independent rect. 9 8
312 112.25 humidity 90 43200 > th dose dependent sin 1 NA
329 112.32 humidity 90 43200 > th dose independent rect. 3 11
331 112.34 humidity 90 43200 > th dose independent rect. 3 9
341 112.38 radiation 1 43200 < th dose independent rect. 24 8
350 112.40 radiation 1 43200 < th dose independent rect. 2 6
377 112.46 humidity 80 43200 < th dose independent rect. 12 3
390 112.53 humidity 90 43200 > th dose independent rect. 4 6
395 112.54 temperature 20 43200 < th dose independent rect. 20 1
400 112.57 humidity 80 43200 < th dose independent rect. 8 10
401 112.57 humidity 90 43200 > th dose independent rect. 15 23
440 112.70 humidity 90 43200 > th dose independent no NA NA
444 112.71 wind 5 43200 < th dose independent rect. 11 1
458 112.74 humidity 90 43200 < th dose independent sin 3 NA
460 112.74 humidity 90 43200 < th dose independent rect. 15 23
478 112.78 humidity 80 43200 < th dose independent rect. 12 5
530 112.83 humidity 90 43200 > th dose independent rect. 19 23
541 112.87 humidity 90 43200 > th dose independent rect. 11 23
544 112.89 humidity 90 43200 < th dose independent no NA NA
553 112.91 humidity 90 43200 > th dose independent rect. 22 23
555 112.93 radiation 1 43200 > th dose independent sin 10 NA
591 113.05 humidity 90 43200 < th dose independent rect. 18 23
592 113.05 humidity 90 43200 < th dose independent rect. 22 23
624 113.12 radiation 1 43200 < th dose independent sin 9 NA
629 113.13 humidity 90 43200 < th dose independent rect. 8 3
649 113.19 humidity 90 43200 < th dose independent rect. 11 23
678 113.22 radiation 1 43200 > th dose independent rect. 18 20
684 113.23 humidity 90 43200 > th dose independent rect. 8 23
805 113.53 radiation 1 43200 < th dose independent rect. 17 22
812 113.55 humidity 80 43200 > th dose independent rect. 14 1
820 113.56 temperature 20 43200 > th dose independent rect. 20 1
833 113.59 radiation 1 43200 > th dose independent rect. 13 20
841 113.61 radiation 1 43200 > th dose independent rect. 5 9
842 113.61 radiation 1 43200 < th dose independent rect. 5 9
890 113.66 radiation 1 43200 < th dose independent rect. 24 14
893 113.66 radiation 1 43200 < th dose independent rect. 20 18
902 113.67 radiation 1 43200 < th dose independent rect. 2 12
961 113.76 humidity 90 43200 > th dose dependent rect. 15 22
1000 113.79 radiation 1 43200 < th dose independent rect. 13 19