Os12g0115300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Plant lipid transfer protein/Par allergen family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os12g0115300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Plant lipid transfer protein/Par allergen family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 119.57 | 0.514 | 14.2 | -0.00281 | 0.336 | -2.89 | -1.3 | -4.78 | 0.208 | 17.1 | 1.1 | 4301 | -- | -- |
| 141.2 | 0.553 | 14.2 | -0.306 | 0.399 | -1.98 | -1.35 | -- | 0.324 | 15.7 | 2.553 | 4247 | -- | -- |
| 123.78 | 0.518 | 14.2 | -0.000619 | 0.33 | -2.88 | -- | -4.75 | 0.199 | 16.9 | 1.17 | 4297 | -- | -- |
| 136.05 | 0.543 | 14.3 | -0.793 | 0.385 | -2.44 | -- | -- | 0.00739 | 12.8 | 2.434 | 4196 | -- | -- |
| 129.41 | 0.53 | 14.2 | -0.024 | -- | -2.84 | -- | -4.62 | 0.2 | -- | 1.17 | 4304 | -- | -- |
| 228.19 | 0.708 | 14.2 | -0.23 | 0.273 | -- | -1.49 | -- | 0.49 | 17.2 | -- | -- | -- | -- |
| 232.95 | 0.715 | 14.2 | -0.231 | 0.291 | -- | -- | -- | 0.482 | 18.8 | -- | -- | -- | -- |
| 131.79 | 0.535 | 14.4 | -0.767 | -- | -2.83 | -- | -- | -0.0504 | -- | 2.258 | 2885 | -- | -- |
| 149.75 | 0.57 | 14.3 | -- | 0.315 | -2.11 | -- | -- | 0.0792 | 14.7 | 2.789 | 4240 | -- | -- |
| 237.39 | 0.72 | 14.2 | -0.238 | -- | -- | -- | -- | 0.476 | -- | -- | -- | -- | -- |
| 234.36 | 0.716 | 14.2 | -- | 0.294 | -- | -- | -- | 0.508 | 18.7 | -- | -- | -- | -- |
| 146.32 | 0.563 | 14.3 | -- | -- | -2.55 | -- | -- | 0.0671 | -- | 2.476 | 2874 | -- | -- |
| 238.88 | 0.721 | 14.2 | -- | -- | -- | -- | -- | 0.503 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 102.99 | humidity | 90 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 2 | 103.22 | humidity | 80 | 43200 | > th | dose independent | rect. | 13 | 4 |
| 3 | 103.30 | humidity | 70 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 4 | 103.50 | humidity | 80 | 43200 | < th | dose independent | rect. | 13 | 2 |
| 5 | 103.52 | humidity | 80 | 43200 | < th | dose independent | rect. | 13 | 4 |
| 24 | 104.57 | humidity | 80 | 43200 | > th | dose independent | rect. | 9 | 9 |
| 25 | 104.60 | humidity | 90 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 28 | 104.65 | humidity | 80 | 43200 | < th | dose independent | rect. | 9 | 8 |
| 85 | 106.35 | humidity | 90 | 43200 | > th | dose dependent | rect. | 19 | 4 |
| 95 | 106.62 | humidity | 90 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 118 | 107.07 | humidity | 80 | 43200 | > th | dose dependent | rect. | 12 | 8 |
| 124 | 107.16 | humidity | 90 | 43200 | > th | dose independent | rect. | 18 | 5 |
| 138 | 107.41 | humidity | 90 | 43200 | > th | dose dependent | rect. | 22 | 1 |
| 141 | 107.48 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 16 |
| 146 | 107.53 | humidity | 90 | 43200 | > th | dose independent | rect. | 13 | 11 |
| 148 | 107.58 | humidity | 90 | 43200 | > th | dose independent | rect. | 14 | 9 |
| 150 | 107.59 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 20 |
| 166 | 107.70 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 21 |
| 186 | 107.82 | humidity | 90 | 43200 | > th | dose dependent | rect. | 6 | 20 |
| 189 | 107.86 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 16 |
| 221 | 108.11 | humidity | 80 | 43200 | > th | dose dependent | sin | 20 | NA |
| 245 | 108.29 | humidity | 90 | 43200 | < th | dose independent | rect. | 13 | 10 |
| 259 | 108.37 | radiation | 1 | 43200 | < th | dose independent | rect. | 12 | 23 |
| 261 | 108.38 | humidity | 90 | 43200 | > th | dose dependent | sin | 18 | NA |
| 271 | 108.42 | radiation | 1 | 43200 | < th | dose independent | rect. | 6 | 13 |
| 275 | 108.42 | radiation | 1 | 43200 | > th | dose independent | rect. | 12 | 23 |
| 278 | 108.43 | radiation | 1 | 43200 | < th | dose independent | rect. | 5 | 5 |
| 289 | 108.44 | radiation | 1 | 43200 | > th | dose independent | rect. | 5 | 5 |
| 322 | 108.52 | humidity | 90 | 43200 | < th | dose independent | rect. | 19 | 4 |
| 333 | 108.54 | radiation | 1 | 43200 | > th | dose independent | rect. | 5 | 14 |
| 361 | 108.59 | humidity | 90 | 43200 | > th | dose independent | sin | 18 | NA |
| 383 | 108.60 | radiation | 1 | 43200 | < th | dose independent | no | NA | NA |
| 417 | 108.61 | humidity | 90 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 418 | 108.61 | radiation | 1 | 43200 | < th | dose independent | rect. | 5 | 9 |
| 420 | 108.62 | radiation | 1 | 43200 | > th | dose independent | sin | 10 | NA |
| 421 | 108.62 | radiation | 1 | 43200 | > th | dose independent | rect. | 5 | 9 |
| 426 | 108.62 | humidity | 90 | 43200 | > th | dose independent | rect. | 3 | 21 |
| 448 | 108.66 | radiation | 1 | 43200 | < th | dose independent | sin | 2 | NA |
| 459 | 108.68 | radiation | 1 | 43200 | > th | dose independent | no | NA | NA |
| 460 | 108.68 | radiation | 1 | 43200 | < th | dose independent | sin | 10 | NA |
| 517 | 108.70 | radiation | 1 | 43200 | > th | dose independent | sin | 3 | NA |
| 570 | 108.73 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 23 |
| 742 | 108.96 | humidity | 90 | 43200 | < th | dose independent | sin | 19 | NA |
| 750 | 108.97 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 14 |
| 789 | 109.03 | radiation | 1 | 43200 | < th | dose dependent | rect. | 14 | 18 |
| 797 | 109.05 | radiation | 1 | 43200 | < th | dose dependent | rect. | 13 | 21 |
| 813 | 109.08 | humidity | 90 | 43200 | > th | dose dependent | rect. | 7 | 2 |
| 826 | 109.11 | radiation | 1 | 43200 | < th | dose dependent | sin | 14 | NA |
| 834 | 109.12 | radiation | 1 | 43200 | < th | dose dependent | rect. | 7 | 23 |
| 839 | 109.13 | radiation | 1 | 43200 | < th | dose dependent | rect. | 7 | 12 |
| 853 | 109.14 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 16 |
| 866 | 109.17 | radiation | 1 | 43200 | < th | dose dependent | rect. | 5 | 14 |
| 878 | 109.17 | radiation | 1 | 43200 | < th | dose dependent | rect. | 9 | 23 |
| 889 | 109.20 | radiation | 1 | 43200 | < th | dose dependent | no | NA | NA |
| 950 | 109.23 | radiation | 1 | 43200 | < th | dose dependent | rect. | 14 | 12 |
| 963 | 109.24 | radiation | 1 | 43200 | < th | dose dependent | rect. | 14 | 5 |
| 964 | 109.24 | radiation | 1 | 43200 | < th | dose dependent | rect. | 14 | 7 |