BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0425100 Os11g0425100|AK064748
(210 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os11g0425100 Peptidase C1A, papain family protein 399 e-112
Os09g0381400 Similar to Ervatamin C (EC 3.4.22.-) (ERV-C) 298 1e-81
Os04g0107700 Peptidase C1A, papain family protein 119 2e-27
Os09g0497500 Similar to Ervatamin B (EC 3.4.22.-) (ERV-B) 82 2e-16
Os12g0273800 Peptidase C1A, papain family protein 80 8e-16
Os07g0108700 80 2e-15
Os02g0715000 Similar to Cysteine proteinase 74 9e-14
Os01g0613500 Peptidase C1A, papain family protein 74 1e-13
Os06g0582600 Similar to Cysteine proteinase 74 1e-13
Os01g0613800 Peptidase C1A, papain family protein 71 6e-13
Os09g0564000 Peptidase C1A, papain family protein 70 1e-12
Os09g0565000 68 5e-12
Os04g0207600 68 6e-12
Os01g0971400 Similar to Cysteine proteinase 65 3e-11
Os04g0206300 65 4e-11
Os05g0108600 Similar to Xylem cysteine proteinase 2 precurs... 64 5e-11
Os04g0203500 Similar to Cysteine proteinase 64 7e-11
>Os11g0425100 Peptidase C1A, papain family protein
Length = 210
Score = 399 bits (1025), Expect = e-112, Method: Compositional matrix adjust.
Identities = 194/210 (92%), Positives = 194/210 (92%)
Query: 1 MAPFMXXXXXXXXXXXXXXXXGAFLATSMLPARATASSCLDVGDMVMMDRFRAWQGAHNR 60
MAPFM GAFLATSMLPARATASSCLDVGDMVMMDRFRAWQGAHNR
Sbjct: 1 MAPFMACASPPVLALALLASCGAFLATSMLPARATASSCLDVGDMVMMDRFRAWQGAHNR 60
Query: 61 SYPSAEEALQRFDVYRRNAEFIDAVNLRGDLTYQLAENEFADLTEEEFLATYTGYYIGDG 120
SYPSAEEALQRFDVYRRNAEFIDAVNLRGDLTYQLAENEFADLTEEEFLATYTGYYIGDG
Sbjct: 61 SYPSAEEALQRFDVYRRNAEFIDAVNLRGDLTYQLAENEFADLTEEEFLATYTGYYIGDG 120
Query: 121 PVDDFVFTTGAGDVDASFSYRVDVPASVDWRAQGAVVPPKSQTSTCSTTPRPKSAVSESV 180
PVDDFVFTTGAGDVDASFSYRVDVPASVDWRAQGAVVPPKSQTSTCSTTPRPKSAVSESV
Sbjct: 121 PVDDFVFTTGAGDVDASFSYRVDVPASVDWRAQGAVVPPKSQTSTCSTTPRPKSAVSESV 180
Query: 181 GKAPMCQQIICQKRFSRQISFEHDDPTYSK 210
GKAPMCQQIICQKRFSRQISFEHDDPTYSK
Sbjct: 181 GKAPMCQQIICQKRFSRQISFEHDDPTYSK 210
>Os09g0381400 Similar to Ervatamin C (EC 3.4.22.-) (ERV-C)
Length = 362
Score = 298 bits (764), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 146/168 (86%), Positives = 147/168 (87%)
Query: 1 MAPFMXXXXXXXXXXXXXXXXGAFLATSMLPARATASSCLDVGDMVMMDRFRAWQGAHNR 60
MAPFM GA LATSMLPARATA SCLDVGDMVMMDRFRAWQGAHNR
Sbjct: 1 MAPFMACASPPVLTLALLASCGALLATSMLPARATAGSCLDVGDMVMMDRFRAWQGAHNR 60
Query: 61 SYPSAEEALQRFDVYRRNAEFIDAVNLRGDLTYQLAENEFADLTEEEFLATYTGYYIGDG 120
SYPSAEEALQRFDVYRRNAEFIDAVNLRGDLTYQLAENEFADLTEEEFLATYTGYY GDG
Sbjct: 61 SYPSAEEALQRFDVYRRNAEFIDAVNLRGDLTYQLAENEFADLTEEEFLATYTGYYAGDG 120
Query: 121 PVDDFVFTTGAGDVDASFSYRVDVPASVDWRAQGAVVPPKSQTSTCST 168
PVDD V TTGAGDVDASFSYRVDVPASVDWRAQGAVVPPKSQTSTCS+
Sbjct: 121 PVDDSVITTGAGDVDASFSYRVDVPASVDWRAQGAVVPPKSQTSTCSS 168
>Os04g0107700 Peptidase C1A, papain family protein
Length = 383
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/129 (52%), Positives = 79/129 (61%), Gaps = 11/129 (8%)
Query: 45 MVMMDRFRAWQGAHNRSYPSAEEALQRFDVYRRNAEFIDAVNLRGDLTYQLAENEFADLT 104
M+MMDRF W HNRSY SA+E L+RF+VYR N EFI+A N G LT++L E F DLT
Sbjct: 50 MMMMDRFHRWMATHNRSYASADEKLRRFEVYRSNMEFIEATNRNGSLTFKLGETPFTDLT 109
Query: 105 EEEFLATYTG---------YYIGDGPVDDFVFTTGAGDVDASFSYR--VDVPASVDWRAQ 153
EEFLATYTG D +D V TT AG V + + R V VP SVDWR +
Sbjct: 110 HEEFLATYTGDVRLPPERRGMQDDSDEEDAVITTSAGYVAGAGAGRRTVAVPESVDWRKE 169
Query: 154 GAVVPPKSQ 162
GAV P K Q
Sbjct: 170 GAVTPAKHQ 178
>Os09g0497500 Similar to Ervatamin B (EC 3.4.22.-) (ERV-B)
Length = 349
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 67/120 (55%), Gaps = 8/120 (6%)
Query: 46 VMMDRFRAWQGAHNRSYPSAEEALQRFDVYRRNAEFIDAVNLRGDLTYQLAENEFADLTE 105
+M+DRF W H R+Y A E +RF+VYRRN E ++ N + Y+LA+N+FADLT
Sbjct: 26 LMLDRFEQWMIRHGRAYTDAGEKQRRFEVYRRNVELVETFNSMSN-GYKLADNKFADLTN 84
Query: 106 EEFLATYTGYYIGDGPVDDF--VFTTGAGDVDASFSYRVDV-PASVDWRAQGAVVPPKSQ 162
EEF A G+ P + T + D+ D+ P SVDWR +GAVV K+Q
Sbjct: 85 EEFRAKMLGFR----PHVTIPQISNTCSADIAMPGESSDDILPKSVDWRKKGAVVEVKNQ 140
>Os12g0273800 Peptidase C1A, papain family protein
Length = 210
Score = 80.5 bits (197), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 59/124 (47%), Gaps = 11/124 (8%)
Query: 43 GDMVMMDRFRAWQGAHNRSYPSAEEALQRFDVYRRNAEFIDAVNLRGDLTYQLAENEFAD 102
GD M R W H R Y A E +R +V++ N FI++ N G Y L N+FAD
Sbjct: 36 GDAAMAARHERWMAQHGRVYKDAAEKARRLEVFKANVAFIESFNAGGKNRYWLGVNQFAD 95
Query: 103 LTEEEFLATYTGYYIGDGPVDDFVFTTGAGDVDASFSYRV----DVPASVDWRAQGAVVP 158
LT EEF AT T P + +TG F Y +PASVDWR +GAV
Sbjct: 96 LTSEEFKATMTNSKGFSTPNNGVRVSTG-------FKYENVSADALPASVDWRTKGAVTR 148
Query: 159 PKSQ 162
K Q
Sbjct: 149 IKDQ 152
>Os07g0108700
Length = 342
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 47 MMDRFRAWQGAHNRSYPSAEEALQRFDVYRRNAEFIDAVNLRGDLTYQLAENEFADLTEE 106
M R W H R+Y A E +RF V++ N + ID N G+ Y+LA N F DLT+
Sbjct: 28 MEARHDKWMAEHGRTYKDAAEKARRFRVFKANVDLIDRSNAAGNKRYRLATNRFTDLTDA 87
Query: 107 EFLATYTGYYIGDGPVDDFVFTTGAGDVDASFSYRVD-VPASVDWRAQGAVVPPKSQTS 164
EF A YTGY P + A + S D PA VDWR QGAV K+Q S
Sbjct: 88 EFAAMYTGY----NPANTMY---AAANATTRLSSEDDQQPAEVDWRQQGAVTGVKNQRS 139
>Os02g0715000 Similar to Cysteine proteinase
Length = 366
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 47 MMDRFRAWQGAHNRSYPSAEEALQRFDVYRRNAEFIDAVNLRGDLTYQLAENEFADLTEE 106
++ F +W H++ Y S +E ++R+++++RN I N R + +Y L N FAD+ E
Sbjct: 51 LVGLFTSWSVKHSKIYASPKEKVKRYEIFKRNLRHIVETNRR-NGSYWLGLNHFADIAHE 109
Query: 107 EFLATYTGYYIGDGPVDDFVFTTGAGDVDASFSYRVDVPASVDWRAQGAVVPPKSQTSTC 166
EF A+Y G G D G ++ V++P +VDWR +GAV P K+Q
Sbjct: 110 EFKASYLGLKPGLARRD----AQPHGSTTFRYANAVNLPWAVDWRKKGAVTPVKNQGECG 165
Query: 167 STTPRPKSAVSESVGKAPMCQQIICQKRFS 196
S A E + QI+ K S
Sbjct: 166 SCWAFSTVAAVEGI------NQIVTGKLVS 189
>Os01g0613500 Peptidase C1A, papain family protein
Length = 360
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 66/135 (48%), Gaps = 1/135 (0%)
Query: 47 MMDRFRAWQGAHNRSYPSAEEALQRFDVYRRNAEFIDAVN-LRGDLTYQLAENEFADLTE 105
M R W R+Y A E +R +V+ NAE +DA N GD TY L N+F+DLT+
Sbjct: 39 MAARHERWMARFGRAYADAAEKARRMEVFAANAERVDAANRAGGDRTYTLGLNQFSDLTD 98
Query: 106 EEFLATYTGYYIGDGPVDDFVFTTGAGDVDASFSYRVDVPASVDWRAQGAVVPPKSQTST 165
+EF T+ GY P A+ + DVP SVDWRA+GAV K+Q S
Sbjct: 99 DEFAQTHLGYSWAPPPPSHRHGHRAENGTAAAAADDTDVPDSVDWRARGAVTEVKNQRSC 158
Query: 166 CSTTPRPKSAVSESV 180
S A +E +
Sbjct: 159 GSCWAFAAVAATEGL 173
>Os06g0582600 Similar to Cysteine proteinase
Length = 357
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 66/125 (52%), Gaps = 9/125 (7%)
Query: 44 DMVMMDRFRAWQGAHNRSYPSAEEALQRFDVYRRNAEFIDAVNLR-GDLTYQLAENEFAD 102
D M +R+ W H R+Y + E +RF+V+R NA FID+ N G + +L N+FAD
Sbjct: 42 DSAMRERYEKWAADHGRTYKDSLEKARRFEVFRTNALFIDSFNAAGGKKSPRLTTNKFAD 101
Query: 103 LTEEEFLATYTGYYIGDGPVDDFVFTTGAGDVDASFSYRVDVPASVDWRAQGAVVPPKSQ 162
LT EEF A Y G + F G+V S DVPA+++WR +GAV K+Q
Sbjct: 102 LTNEEF-AEYYGRPFSTPVIGGSGFMY--GNVRTS-----DVPANINWRDRGAVTQVKNQ 153
Query: 163 TSTCS 167
S
Sbjct: 154 KDCAS 158
>Os01g0613800 Peptidase C1A, papain family protein
Length = 359
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 63/132 (47%), Gaps = 11/132 (8%)
Query: 45 MVMMDRFRAWQGAHNRSYPSAEEALQRFDVYRRNAEFIDAVNLRGDLTYQLAENEFADLT 104
M M R R W R+Y A E +RF+V+R NAE IDA N GDLTY L FADLT
Sbjct: 32 MPMAARHRCWMARVGRTYADAAEKARRFEVFRANAERIDAANRAGDLTYTLGLTPFADLT 91
Query: 105 EEEFLATYTGYYIGDGPVDD-------FVFTTGAGDVDASFSYRVDVPASVDWRAQGAVV 157
+EF A + + D VD+ F A S V S DWR GAV
Sbjct: 92 ADEFRAR---HLMPDADVDEPATARVLFEQEEKAAKQHLPPSRPPAVWGSKDWRDLGAVT 148
Query: 158 PPKSQ-TSTCST 168
P + Q + C++
Sbjct: 149 PVQDQGKNNCNS 160
>Os09g0564000 Peptidase C1A, papain family protein
Length = 283
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 61/124 (49%), Gaps = 9/124 (7%)
Query: 47 MMDRFRAWQGA-HNRSYP-SAEEALQRFDVYRRNAEFIDAVNLRGDLTYQLAENEFADLT 104
M ++ W+GA H S E RF+ ++ NA ++ N + +TY+L N+FAD+T
Sbjct: 40 MWSLYQRWRGAVHTSSLDMDVAETESRFEAFKANARYVSEFNKKEGMTYKLGLNKFADMT 99
Query: 105 EEEFLATYTGYYIGDGPVDDFVFTTGAGDVDASFSYRVDVPASVDWRAQGAVVPPKSQTS 164
EEF+A YTG + D A + DV AS DWR GAV P + Q
Sbjct: 100 LEEFVAKYTGTKV------DAAAMARAPQAEEELELAGDVAASWDWRQHGAVTPAREQ-G 152
Query: 165 TCST 168
TC +
Sbjct: 153 TCES 156
>Os09g0565000
Length = 357
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 60/116 (51%), Gaps = 5/116 (4%)
Query: 47 MMDRFRAWQGAHNRSYPSAEEALQRFDVYRRNAEFIDAVNLRGDLTYQLAENEFADLTEE 106
+ R+R GA + S + RF+V+++NA +I N + ++Y+L N+FADLT E
Sbjct: 25 LYQRWRHVYGAASSSPRDLADKGSRFEVFKKNARYIHDFNRKKGMSYKLGLNKFADLTLE 84
Query: 107 EFLATYTGYYIGDGPVDDFVFTTGAGDVDASFSYRVDVPASVDWRAQGAVVPPKSQ 162
EF A YTG GP+ TG+ + A D P + DWR GAV K Q
Sbjct: 85 EFTAKYTG--ANPGPITGLKNGTGSPPLAAVAG---DAPPAWDWREHGAVTRVKDQ 135
>Os04g0207600
Length = 360
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 61/120 (50%), Gaps = 15/120 (12%)
Query: 47 MMDRFRAWQGAHNRSYPSAEEALQRFDVYRRNAEFIDAVNLRGDLTYQLAENEFADLTEE 106
M+ R W + R Y A E +RF++++ N FI++ N G+ + L N+FADLT
Sbjct: 54 MVARHERWMEQYGRVYKDATEKARRFEIFKANVAFIESFNA-GNHKFWLGVNQFADLTNY 112
Query: 107 EFLATYTGYYIGDGPVDDFVFTTGAGDVDASFSYR---VD-VPASVDWRAQGAVVPPKSQ 162
EF AT T + F V +F Y +D +PA+VDWR +GAV P K Q
Sbjct: 113 EFRATKT----------NKGFIPSTVRVPTTFRYENVSIDTLPATVDWRTKGAVTPIKDQ 162
>Os01g0971400 Similar to Cysteine proteinase
Length = 365
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 58/120 (48%), Gaps = 14/120 (11%)
Query: 47 MMDRFRAWQGAHNRSYPSAEEALQRFDVYRRNAEFIDAVNLRGDLTYQLAENEFADLTEE 106
+M+ F + + ++Y S EE L+RF+V++ N ID N + Y L NEFADLT +
Sbjct: 48 LMELFEKFMAKYRKAYSSLEEKLRRFEVFKDNLNHIDEENKK-ITGYWLGLNEFADLTHD 106
Query: 107 EFLATYTGYYIGDGPVDDFVFTTGAGDVDASFSYR----VDVPASVDWRAQGAVVPPKSQ 162
EF A Y G + + D F Y +P VDWR +GAV K+Q
Sbjct: 107 EFKAAYLGLTLTPARRN---------SNDQLFRYEEVEAASLPKEVDWRKKGAVTEVKNQ 157
>Os04g0206300
Length = 339
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 67/144 (46%), Gaps = 25/144 (17%)
Query: 25 LATSMLPARATASSCLDVGDMVMMDRFRAWQGAHNRSYPSAEEALQRFDVYRRNAEFIDA 84
L +++L AR + D M R W + R Y E +RF+V++ N FI++
Sbjct: 17 LCSAVLAARELSD------DAAMAARHERWMAQYGRVYRDDAEKARRFEVFKANVAFIES 70
Query: 85 VNLRGDLTYQLAENEFADLTEEEF--LATYTGYYIGDGPVDDFVFTTGAGDVDASFSY-- 140
N G+ + L N+FADLT +EF + T G F V F Y
Sbjct: 71 FN-AGNHNFWLGVNQFADLTNDEFRWMKTNKG------------FIPSTTRVPTGFRYEN 117
Query: 141 -RVD-VPASVDWRAQGAVVPPKSQ 162
+D +PA+VDWR +GAV P K Q
Sbjct: 118 VNIDALPATVDWRTKGAVTPIKDQ 141
>Os05g0108600 Similar to Xylem cysteine proteinase 2 precursor (EC 3.4.22.-)
(AtXCP2)
Length = 358
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 62/120 (51%), Gaps = 11/120 (9%)
Query: 47 MMDRFRAWQGAHNRSYPSAEEALQRFDVYRRNAEFIDAVNLRGDLTYQLAENEFADLTEE 106
+++ F W + ++Y S EE ++RF+V++ N ID +N + +Y L NEFADLT +
Sbjct: 47 LIELFEKWVAKYRKAYASFEEKVRRFEVFKDNLNHIDDINKK-VTSYWLGLNEFADLTHD 105
Query: 107 EFLATYTGYYIGDGPVDDFVFTTGAGDVDASFSY----RVDVPASVDWRAQGAVVPPKSQ 162
EF ATY G + +++ F Y +VP +DWR + AV K+Q
Sbjct: 106 EFKATYLGLTPPPTRSNSKHYSS------EEFRYGKMSNGEVPKEMDWRKKNAVTEVKNQ 159
>Os04g0203500 Similar to Cysteine proteinase
Length = 336
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 68/141 (48%), Gaps = 19/141 (13%)
Query: 25 LATSMLPARATASSCLDVGDMVMMDRFRAWQGAHNRSYPSAEEALQRFDVYRRNAEFIDA 84
L +++L AR + D M R W + R Y E +RF+V++ N FI++
Sbjct: 17 LCSAVLAARELSD------DAAMAARHERWMAQYGRMYKDDAEKARRFEVFKANVAFIES 70
Query: 85 VNLRGDLTYQLAENEFADLTEEEFLATYTGYYIGDGPVDDFV---FTTGAGDVDASFSYR 141
N G+ + L N+FADLT +EF +T T G P V F ++DA
Sbjct: 71 FN-AGNHKFWLGVNQFADLTNDEFRSTKTNK--GFIPSTTRVPTGFRNENVNIDA----- 122
Query: 142 VDVPASVDWRAQGAVVPPKSQ 162
+PA++DWR +G V P K Q
Sbjct: 123 --LPATMDWRTKGVVTPIKDQ 141
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.132 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 6,812,047
Number of extensions: 286277
Number of successful extensions: 979
Number of sequences better than 1.0e-10: 20
Number of HSP's gapped: 969
Number of HSP's successfully gapped: 20
Length of query: 210
Length of database: 17,035,801
Length adjustment: 96
Effective length of query: 114
Effective length of database: 12,023,257
Effective search space: 1370651298
Effective search space used: 1370651298
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 154 (63.9 bits)