Os12g0273800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase C1A, papain family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os12g0273800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Peptidase C1A, papain family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 112.16 | 0.498 | 3.22 | -0.921 | 0.0926 | 2.19 | 0.17 | -11.6 | 0.0176 | 16.1 | 1000 | 89 | -- | -- |
| 114 | 0.501 | 3.08 | -0.168 | 0.0888 | 0.126 | 0.11 | -- | 0.0171 | 16.8 | 1000 | 89 | -- | -- |
| 112.21 | 0.493 | 3.21 | -0.911 | 0.0977 | 2.21 | -- | -11.7 | 0.0189 | 16.7 | 999.9 | 115 | -- | -- |
| 113.94 | 0.497 | 3.08 | -0.168 | 0.0899 | 0.141 | -- | -- | 0.0142 | 17.2 | 999.9 | 145 | -- | -- |
| 112.69 | 0.494 | 3.21 | -0.891 | -- | 2.14 | -- | -11.3 | 0.0164 | -- | 1000 | 117 | -- | -- |
| 114.43 | 0.501 | 3.08 | -0.146 | 0.0907 | -- | 0.124 | -- | 0.00862 | 16.7 | -- | -- | -- | -- |
| 114.46 | 0.501 | 3.08 | -0.145 | 0.0927 | -- | -- | -- | 0.00922 | 17.1 | -- | -- | -- | -- |
| 114.37 | 0.498 | 3.08 | -0.174 | -- | 0.149 | -- | -- | 0.0157 | -- | 1000 | 157 | -- | -- |
| 114.68 | 0.499 | 3.08 | -- | 0.094 | 0.123 | -- | -- | 0.0369 | 17 | 1000 | 145 | -- | -- |
| 114.91 | 0.501 | 3.08 | -0.149 | -- | -- | -- | -- | 0.00687 | -- | -- | -- | -- | -- |
| 115.02 | 0.502 | 3.08 | -- | 0.0952 | -- | -- | -- | 0.0254 | 17.1 | -- | -- | -- | -- |
| 115.06 | 0.501 | 3.08 | -- | -- | 0.0975 | -- | -- | 0.0381 | -- | 1003 | 118 | -- | -- |
| 115.5 | 0.502 | 3.08 | -- | -- | -- | -- | -- | 0.0233 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 100.68 | radiation | 20 | 10 | > th | dose dependent | rect. | 15 | 1 |
| 47 | 101.69 | radiation | 1 | 90 | < th | dose independent | rect. | 14 | 1 |
| 48 | 101.69 | radiation | 1 | 90 | < th | dose dependent | rect. | 14 | 1 |
| 52 | 103.33 | radiation | 30 | 10 | > th | dose independent | rect. | 15 | 1 |
| 103 | 105.16 | wind | 7 | 90 | > th | dose independent | rect. | 14 | 1 |
| 198 | 106.94 | humidity | 50 | 10 | < th | dose dependent | rect. | 11 | 5 |
| 217 | 107.02 | temperature | 30 | 10 | > th | dose dependent | rect. | 15 | 1 |
| 218 | 107.03 | humidity | 50 | 10 | < th | dose independent | rect. | 11 | 5 |
| 238 | 107.07 | temperature | 30 | 10 | > th | dose independent | rect. | 14 | 2 |
| 272 | 107.23 | humidity | 50 | 30 | < th | dose independent | rect. | 16 | 2 |
| 292 | 107.25 | humidity | 50 | 30 | < th | dose dependent | rect. | 16 | 2 |
| 401 | 107.44 | humidity | 50 | 10 | < th | dose independent | rect. | 14 | 2 |
| 403 | 107.44 | humidity | 50 | 10 | < th | dose dependent | rect. | 14 | 2 |
| 416 | 107.56 | humidity | 80 | 90 | > th | dose independent | rect. | 15 | 1 |
| 434 | 107.68 | temperature | 25 | 90 | < th | dose independent | rect. | 14 | 1 |
| 478 | 107.88 | radiation | 20 | 10 | < th | dose independent | sin | 14 | NA |
| 492 | 108.09 | radiation | 20 | 10 | > th | dose independent | sin | 14 | NA |
| 517 | 108.28 | humidity | 80 | 90 | > th | dose dependent | rect. | 15 | 1 |
| 519 | 108.34 | atmosphere | 1015 | 1440 | < th | dose independent | rect. | 7 | 4 |
| 525 | 108.35 | humidity | 50 | 10 | < th | dose independent | sin | 6 | NA |
| 548 | 108.48 | atmosphere | 1015 | 1440 | < th | dose independent | rect. | 4 | 7 |
| 551 | 108.49 | atmosphere | 1015 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 553 | 108.51 | atmosphere | 1015 | 1440 | > th | dose independent | rect. | 10 | 1 |
| 570 | 108.51 | atmosphere | 1015 | 1440 | > th | dose dependent | rect. | 10 | 1 |
| 586 | 108.52 | humidity | 80 | 10 | > th | dose dependent | rect. | 14 | 2 |
| 596 | 108.55 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 14 | 3 |
| 619 | 108.68 | humidity | 80 | 10 | > th | dose independent | rect. | 15 | 1 |
| 627 | 108.68 | wind | 7 | 10 | > th | dose dependent | rect. | 16 | 1 |
| 638 | 108.79 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 15 | 1 |
| 651 | 108.81 | wind | 3 | 90 | > th | dose dependent | rect. | 14 | 2 |
| 709 | 109.07 | humidity | 80 | 270 | > th | dose dependent | rect. | 12 | 1 |
| 725 | 109.15 | humidity | 90 | 270 | > th | dose independent | rect. | 11 | 2 |
| 749 | 109.23 | wind | 3 | 90 | > th | dose independent | rect. | 14 | 2 |
| 833 | 109.71 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 14 | 10 |
| 873 | 109.80 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 15 | 9 |
| 946 | 110.10 | temperature | 25 | 30 | > th | dose independent | rect. | 4 | 1 |
| 986 | 110.24 | humidity | 50 | 10 | < th | dose dependent | sin | 6 | NA |
| 997 | 110.28 | humidity | 90 | 4320 | > th | dose independent | rect. | 1 | 1 |