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Os06g0582600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Cysteine proteinase.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12 (0.066) R2 : 0.69
β1 : -1.44 (0.357) R2dD : 0.0499 R2D : -0.245
β2 : 1.44 (0.122) R2dC : 0.0953 R2C : 0.055
β3 : 4.17 (0.166) R2dE : 0.59 R2E : 0.505
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -7.27 (1.05) R2dD*E : 0.144 R2D*E : 0.109
γ1 : -0.559 (0.138) R2dN8 : 0.0281 R2N8 : -0.0849
σ : 0.875
deviance : 353.13
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C
peak time of C : 17.7
E
wheather : temperature
threshold : 25.75
memory length : 6092
response mode : > th
dose dependency : dose independent
G
type of G : sin
peak or start time of G : 22.3
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
356.81 0.888 12 -1.38 1.53 4.2 -0.298 -6.99 -0.548 17.6 25.5 5949 21.7 --
400.92 0.933 11.9 -0.0434 1.6 4.09 -0.507 -- -0.769 17.4 24.5 10502 21.7 --
353.13 0.875 12 -1.44 1.44 4.17 -- -7.27 -0.559 17.7 25.75 6092 22.3 --
378.73 0.906 11.8 -1.03 1.59 4.24 -- -- -0.81 17.2 23.2 23594 22.6 --
421.13 0.956 12 -1.44 -- 4.42 -- -7.34 -0.482 -- 25.9 5086 22.1 --
838.27 1.36 11.5 2.51 1.48 -- -0.433 -- 0.89 17.6 -- -- -- --
838.71 1.36 11.5 2.51 1.48 -- -- -- 0.888 17.5 -- -- -- --
466.02 1.01 11.8 0.133 -- 4.35 -- -- -0.396 -- 25.2 4988 19.4 --
401.05 0.933 11.8 -- 1.46 3.8 -- -- -0.681 17.4 23.5 23637 22.8 --
952.84 1.44 11.5 2.47 -- -- -- -- 0.852 -- -- -- -- --
1005.32 1.48 11.6 -- 1.44 -- -- -- 0.608 17.6 -- -- -- --
461.58 1 11.7 -- -- 4.38 -- -- -0.177 -- 25.2 4974 19.5 --
1113.21 1.56 11.5 -- -- -- -- -- 0.579 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 329.93 humidity 90 43200 > th dose dependent rect. 22 1
2 332.64 humidity 90 43200 > th dose dependent rect. 20 4
3 332.88 humidity 90 43200 > th dose dependent rect. 18 6
6 334.01 humidity 90 43200 > th dose independent rect. 22 1
19 338.31 humidity 90 43200 > th dose independent rect. 18 6
42 342.37 humidity 90 43200 > th dose dependent rect. 11 15
44 342.46 humidity 80 43200 < th dose independent rect. 11 3
50 342.89 humidity 90 43200 > th dose dependent sin 17 NA
51 342.98 humidity 90 43200 > th dose independent rect. 18 1
54 343.49 radiation 1 43200 < th dose dependent rect. 18 1
77 344.89 temperature 20 43200 < th dose independent rect. 21 1
82 345.36 humidity 90 43200 < th dose independent rect. 18 1
96 346.11 humidity 90 43200 < th dose independent rect. 22 1
98 346.11 radiation 1 43200 < th dose dependent rect. 6 23
104 346.23 temperature 20 43200 > th dose independent rect. 21 1
106 346.29 radiation 1 43200 < th dose dependent rect. 13 16
111 346.43 humidity 80 43200 > th dose independent rect. 11 4
120 346.66 radiation 1 43200 < th dose dependent rect. 13 6
129 346.77 radiation 1 43200 < th dose dependent sin 16 NA
130 346.78 radiation 1 43200 < th dose dependent rect. 6 13
139 346.88 radiation 1 43200 < th dose dependent rect. 18 21
152 346.96 radiation 1 43200 < th dose dependent rect. 18 13
178 347.37 humidity 90 43200 < th dose independent rect. 17 6
193 347.53 temperature 25 43200 < th dose independent rect. 17 1
205 347.78 temperature 20 43200 > th dose independent rect. 20 3
231 347.98 temperature 25 14400 > th dose dependent rect. 15 1
238 348.04 radiation 1 43200 < th dose dependent rect. 12 20
273 348.41 temperature 20 43200 > th dose independent rect. 18 6
326 349.25 temperature 25 43200 > th dose independent rect. 17 1
348 349.53 radiation 1 43200 < th dose dependent rect. 4 15
400 349.73 radiation 1 43200 < th dose dependent no NA NA
432 350.15 humidity 90 43200 > th dose independent rect. 9 15
483 350.88 humidity 90 43200 > th dose independent sin 17 NA
500 351.09 humidity 90 43200 > th dose dependent rect. 15 22
535 351.68 humidity 90 43200 > th dose dependent rect. 11 23
536 351.71 radiation 1 14400 > th dose independent rect. 18 1
552 351.76 humidity 90 43200 > th dose dependent no NA NA
566 352.07 humidity 90 43200 > th dose dependent rect. 9 23
592 352.46 temperature 25 43200 > th dose independent rect. 14 4
605 352.58 humidity 90 43200 > th dose dependent rect. 20 23
614 352.75 temperature 25 43200 > th dose independent rect. 14 1
615 352.76 temperature 25 43200 < th dose independent rect. 14 1
656 353.14 temperature 20 43200 < th dose independent rect. 18 12
665 353.24 temperature 20 43200 < th dose independent sin 14 NA
668 353.29 temperature 20 43200 < th dose independent rect. 18 14
697 353.60 temperature 20 43200 > th dose independent sin 14 NA
699 353.60 temperature 20 43200 > th dose independent rect. 18 14
782 354.18 radiation 1 14400 > th dose independent rect. 18 21
806 354.31 temperature 20 43200 < th dose independent rect. 5 3
829 354.45 radiation 1 43200 < th dose dependent rect. 4 11
859 354.63 humidity 90 43200 < th dose independent rect. 9 16
886 354.83 radiation 1 43200 < th dose dependent rect. 22 17
928 355.04 temperature 20 43200 > th dose independent rect. 5 3
936 355.09 radiation 1 43200 < th dose dependent rect. 5 1
945 355.14 humidity 90 43200 > th dose independent rect. 2 22
982 355.34 radiation 1 43200 < th dose dependent rect. 4 3