Os01g0971400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Cysteine proteinase.
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Os01g0971400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Cysteine proteinase.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 203.58 | 0.67 | 3.15 | 1.07 | 0.313 | -0.00821 | 0.934 | 7.35 | -0.15 | 6.44 | 32.62 | 1106 | -- | -- |
| 205.4 | 0.668 | 3.28 | -0.0235 | 0.319 | 0.806 | 0.89 | -- | -0.153 | 6.11 | 32.89 | 1293 | -- | -- |
| 205.37 | 0.667 | 3.16 | 1.08 | 0.328 | -0.0194 | -- | 7.34 | -0.156 | 5.5 | 32.52 | 1114 | -- | -- |
| 206.87 | 0.67 | 3.28 | -0.0219 | 0.334 | 0.802 | -- | -- | -0.153 | 5.23 | 32.97 | 1338 | -- | -- |
| 210.93 | 0.676 | 3.16 | 1.14 | -- | -0.0256 | -- | 7.62 | -0.145 | -- | 32.4 | 1121 | -- | -- |
| 237.4 | 0.722 | 3.31 | 0.175 | 0.401 | -- | 0.785 | -- | -0.292 | 5.02 | -- | -- | -- | -- |
| 238.73 | 0.724 | 3.32 | 0.173 | 0.407 | -- | -- | -- | -0.296 | 4.43 | -- | -- | -- | -- |
| 212.67 | 0.679 | 3.29 | -0.0122 | -- | 0.831 | -- | -- | -0.14 | -- | 32.94 | 1317 | -- | -- |
| 206.88 | 0.67 | 3.28 | -- | 0.335 | 0.801 | -- | -- | -0.154 | 5.22 | 33 | 1337 | -- | -- |
| 247.62 | 0.735 | 3.32 | 0.189 | -- | -- | -- | -- | -0.285 | -- | -- | -- | -- | -- |
| 239.51 | 0.724 | 3.32 | -- | 0.411 | -- | -- | -- | -0.315 | 4.42 | -- | -- | -- | -- |
| 212.68 | 0.679 | 3.29 | -- | -- | 0.829 | -- | -- | -0.141 | -- | 32.9 | 1317 | -- | -- |
| 248.55 | 0.736 | 3.33 | -- | -- | -- | -- | -- | -0.306 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 198.38 | humidity | 90 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 2 | 199.66 | humidity | 90 | 90 | > th | dose independent | rect. | 4 | 1 |
| 3 | 200.18 | temperature | 30 | 720 | > th | dose independent | rect. | 18 | 15 |
| 4 | 200.42 | temperature | 30 | 720 | > th | dose independent | rect. | 18 | 1 |
| 18 | 200.48 | temperature | 20 | 30 | > th | dose independent | rect. | 4 | 2 |
| 19 | 200.78 | temperature | 20 | 30 | > th | dose dependent | rect. | 4 | 2 |
| 23 | 201.58 | temperature | 25 | 720 | > th | dose dependent | rect. | 18 | 6 |
| 28 | 202.02 | temperature | 25 | 720 | > th | dose dependent | rect. | 18 | 14 |
| 29 | 202.13 | temperature | 30 | 1440 | > th | dose dependent | rect. | 17 | 17 |
| 33 | 202.33 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 7 |
| 39 | 202.63 | temperature | 30 | 1440 | > th | dose dependent | rect. | 17 | 2 |
| 59 | 202.80 | wind | 1 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 73 | 203.52 | temperature | 25 | 90 | < th | dose independent | rect. | 4 | 1 |
| 90 | 203.67 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 13 |
| 91 | 203.71 | wind | 3 | 10 | < th | dose dependent | rect. | 4 | 2 |
| 93 | 203.73 | wind | 1 | 90 | < th | dose independent | rect. | 4 | 1 |
| 110 | 203.95 | temperature | 20 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 133 | 204.38 | temperature | 30 | 1440 | > th | dose dependent | sin | 11 | NA |
| 143 | 204.67 | atmosphere | 1010 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 144 | 204.79 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 8 |
| 149 | 204.91 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 1 |
| 150 | 204.92 | humidity | 70 | 720 | < th | dose independent | rect. | 18 | 1 |
| 151 | 204.93 | temperature | 25 | 720 | > th | dose dependent | rect. | 21 | 2 |
| 154 | 204.95 | wind | 1 | 30 | < th | dose independent | rect. | 4 | 3 |
| 155 | 205.00 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 11 |
| 215 | 205.39 | humidity | 70 | 720 | < th | dose independent | rect. | 18 | 13 |
| 274 | 206.24 | humidity | 70 | 720 | > th | dose independent | rect. | 19 | 8 |
| 290 | 206.27 | wind | 1 | 30 | < th | dose independent | rect. | 2 | 5 |
| 297 | 206.40 | temperature | 30 | 1440 | > th | dose independent | rect. | 17 | 17 |
| 298 | 206.42 | humidity | 90 | 30 | > th | dose independent | rect. | 4 | 6 |
| 300 | 206.42 | radiation | 20 | 1440 | > th | dose dependent | rect. | 16 | 16 |
| 303 | 206.45 | temperature | 20 | 30 | > th | dose independent | rect. | 4 | 17 |
| 312 | 206.56 | humidity | 90 | 30 | > th | dose dependent | rect. | 4 | 6 |
| 387 | 207.14 | humidity | 80 | 720 | < th | dose dependent | rect. | 18 | 1 |
| 395 | 207.24 | humidity | 90 | 30 | > th | dose dependent | rect. | 4 | 16 |
| 437 | 207.37 | temperature | 30 | 1440 | > th | dose dependent | rect. | 9 | 10 |
| 468 | 207.42 | temperature | 30 | 1440 | > th | dose dependent | no | NA | NA |
| 562 | 207.43 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 9 |
| 627 | 207.68 | radiation | 20 | 1440 | > th | dose dependent | rect. | 7 | 1 |
| 640 | 207.95 | radiation | 30 | 1440 | > th | dose independent | rect. | 7 | 1 |
| 705 | 208.22 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 12 |
| 769 | 208.59 | atmosphere | 1015 | 10 | < th | dose dependent | rect. | 4 | 2 |
| 811 | 208.90 | temperature | 20 | 270 | > th | dose dependent | rect. | 1 | 4 |
| 815 | 208.93 | temperature | 10 | 720 | > th | dose dependent | sin | 15 | NA |
| 816 | 208.93 | temperature | 30 | 1440 | > th | dose dependent | rect. | 9 | 2 |
| 827 | 209.01 | radiation | 30 | 1440 | < th | dose independent | rect. | 7 | 1 |
| 883 | 209.27 | temperature | 30 | 1440 | > th | dose independent | sin | 11 | NA |
| 893 | 209.30 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 898 | 209.35 | temperature | 30 | 1440 | < th | dose independent | sin | 11 | NA |
| 927 | 209.44 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 16 |
| 1000 | 209.67 | humidity | 70 | 720 | < th | dose dependent | rect. | 18 | 13 |