Os01g0613800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase C1A, papain family protein.
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Os01g0613800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Peptidase C1A, papain family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 259.6 | 0.757 | 10.8 | 2.41 | 1.68 | 2.23 | 0.731 | 3.69 | -0.203 | 7.85 | 1.15 | 13490 | 6.96 | -- |
| 282.48 | 0.783 | 10.8 | 2.31 | 1.7 | 1.95 | 0.831 | -- | -0.173 | 7.67 | 2.338 | 14922 | 7.25 | -- |
| 260.52 | 0.752 | 10.8 | 2.45 | 1.71 | 2.26 | -- | 3.62 | -0.205 | 7.79 | 1.14 | 13517 | 6.79 | -- |
| 276.67 | 0.775 | 10.8 | 1.98 | 1.74 | 2.04 | -- | -- | -0.22 | 7.96 | 2.331 | 14934 | 7.89 | -- |
| 379.38 | 0.907 | 10.8 | 2.3 | -- | 2.07 | -- | 3.58 | -0.187 | -- | 0.83 | 21581 | 6.83 | -- |
| 401.72 | 0.94 | 10.7 | 1.68 | 1.48 | -- | 0.413 | -- | 0.14 | 7.79 | -- | -- | -- | -- |
| 402.21 | 0.939 | 10.7 | 1.69 | 1.48 | -- | -- | -- | 0.139 | 7.77 | -- | -- | -- | -- |
| 376.2 | 0.903 | 11 | 0.154 | -- | 2.38 | -- | -- | -0.621 | -- | 1.336 | 46086 | 10.5 | -- |
| 244.71 | 0.729 | 11 | -- | 1.47 | 2.58 | -- | -- | -1.1 | 7.95 | 1.22 | 47520 | 8.69 | -- |
| 521.21 | 1.07 | 10.8 | 1.71 | -- | -- | -- | -- | 0.16 | -- | -- | -- | -- | -- |
| 477.82 | 1.02 | 10.8 | -- | 1.5 | -- | -- | -- | -0.0493 | 7.69 | -- | -- | -- | -- |
| 363.01 | 0.887 | 11.1 | -- | -- | 2.55 | -- | -- | -1.07 | -- | 1.559 | 47520 | 11.7 | -- |
| 598.53 | 1.14 | 10.8 | -- | -- | -- | -- | -- | -0.0296 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 243.64 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 1 | 4 |
| 2 | 243.90 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 1 | 4 |
| 3 | 243.91 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 1 | 4 |
| 4 | 243.91 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 1 | 4 |
| 5 | 244.19 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 23 | 7 |
| 9 | 244.55 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 23 | 7 |
| 10 | 244.68 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 23 | 7 |
| 11 | 244.68 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 23 | 7 |
| 25 | 245.85 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 24 | 10 |
| 35 | 246.45 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 2 | 12 |
| 40 | 246.75 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 24 | 10 |
| 41 | 246.75 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 24 | 10 |
| 42 | 246.79 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 24 | 10 |
| 52 | 246.93 | temperature | 10.0 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 64 | 247.11 | temperature | 10.0 | 43200 | > th | dose dependent | rect. | 9 | 5 |
| 79 | 247.24 | temperature | 10.0 | 43200 | > th | dose dependent | rect. | 9 | 2 |
| 100 | 247.34 | temperature | 10.0 | 43200 | > th | dose dependent | rect. | 7 | 12 |
| 150 | 247.52 | temperature | 30.0 | 43200 | < th | dose dependent | rect. | 7 | 3 |
| 160 | 247.55 | temperature | 30.0 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 171 | 247.59 | temperature | 10.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 174 | 247.60 | temperature | 10.0 | 43200 | > th | dose dependent | sin | 23 | NA |
| 193 | 247.67 | temperature | 30.0 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 266 | 247.96 | temperature | 30.0 | 43200 | < th | dose dependent | rect. | 6 | 14 |
| 409 | 248.21 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 23 | 15 |
| 445 | 248.29 | temperature | 30.0 | 43200 | < th | dose dependent | sin | 23 | NA |
| 487 | 248.38 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 509 | 248.43 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 2 | 12 |
| 517 | 248.44 | temperature | 30.0 | 43200 | < th | dose dependent | rect. | 12 | 9 |
| 562 | 248.51 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 602 | 248.59 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 8 | 11 |
| 774 | 248.95 | precipitation | 0.1 | 43200 | > th | dose dependent | sin | 6 | NA |
| 779 | 248.96 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 3 | 3 |
| 780 | 248.96 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 1 | 5 |
| 803 | 249.01 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 19 | 11 |
| 816 | 249.03 | temperature | 10.0 | 43200 | > th | dose dependent | no | NA | NA |
| 843 | 249.08 | temperature | 10.0 | 43200 | > th | dose dependent | rect. | 17 | 23 |
| 846 | 249.09 | temperature | 10.0 | 43200 | > th | dose dependent | rect. | 15 | 23 |
| 862 | 249.12 | temperature | 10.0 | 43200 | > th | dose dependent | rect. | 12 | 23 |
| 916 | 249.22 | temperature | 30.0 | 43200 | < th | dose dependent | rect. | 12 | 2 |