BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0163600 Os11g0163600|AK070139
(317 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os11g0163600 Tubby family protein 568 e-162
Os12g0163400 Tubby family protein 418 e-117
Os05g0437900 Tubby family protein 364 e-101
Os01g0866800 Similar to F24P17.15 protein (Tubby-like prote... 359 2e-99
Os04g0687900 Similar to T24D18.17 protein (Tubby-like prote... 341 5e-94
Os08g0103300 Similar to Tubby-like protein 3 341 5e-94
Os03g0351400 Similar to Tubby-like protein 3 297 8e-81
Os07g0667000 Similar to Tubby-like protein 3 294 5e-80
Os01g0759100 Tubby family protein 187 1e-47
Os02g0705300 Tubby family protein 142 5e-34
Os05g0514300 Similar to Tubby-like protein 3 131 8e-31
Os05g0560400 Tubby family protein 119 4e-27
>Os11g0163600 Tubby family protein
Length = 317
Score = 568 bits (1465), Expect = e-162, Method: Compositional matrix adjust.
Identities = 275/317 (86%), Positives = 275/317 (86%)
Query: 1 MQCFIRRDKSTQTYYLYLSLGSAVLVDNGKFLLSAKRNWHATCTEYVISMNANNLSRSTN 60
MQCFIRRDKSTQTYYLYLSLGSAVLVDNGKFLLSAKRNWHATCTEYVISMNANNLSRSTN
Sbjct: 1 MQCFIRRDKSTQTYYLYLSLGSAVLVDNGKFLLSAKRNWHATCTEYVISMNANNLSRSTN 60
Query: 61 TNIGKLRSNFLGTKFVIYDTHTPYNATSDSQSGKTSRRFSNKGTAKHPCSTYSIANISYE 120
TNIGKLRSNFLGTKFVIYDTHTPYNATSDSQSGKTSRRFSNKGTAKHPCSTYSIANISYE
Sbjct: 61 TNIGKLRSNFLGTKFVIYDTHTPYNATSDSQSGKTSRRFSNKGTAKHPCSTYSIANISYE 120
Query: 121 LNVFGTRGPRRMCCLMHSIPASSLEAGGTVPSQPDSILAHXXXXXXXXXXXXXXXXXXXX 180
LNVFGTRGPRRMCCLMHSIPASSLEAGGTVPSQPDSILAH
Sbjct: 121 LNVFGTRGPRRMCCLMHSIPASSLEAGGTVPSQPDSILAHSLNESSFRSVSFSKSSVMDH 180
Query: 181 XMHFSSAQFSDISIGDGPRIGGRVLSDDEECKETPLILQNKAPRWHEQLQCWCLNFRGRV 240
MHFSSAQFSDISIGDGPRIGGRVLSDDEECKETPLILQNKAPRWHEQLQCWCLNFRGRV
Sbjct: 181 SMHFSSAQFSDISIGDGPRIGGRVLSDDEECKETPLILQNKAPRWHEQLQCWCLNFRGRV 240
Query: 241 TVASVKNFQLIXXXXXXXXXXXXXXXXXXXXXEHDKVILQFGKVAKDMFTMDYHYPLSAF 300
TVASVKNFQLI EHDKVILQFGKVAKDMFTMDYHYPLSAF
Sbjct: 241 TVASVKNFQLIAATQPAAGAPTPSQPVPPPPPEHDKVILQFGKVAKDMFTMDYHYPLSAF 300
Query: 301 QAFAISLSSFDTKLACE 317
QAFAISLSSFDTKLACE
Sbjct: 301 QAFAISLSSFDTKLACE 317
>Os12g0163400 Tubby family protein
Length = 445
Score = 418 bits (1075), Expect = e-117, Method: Compositional matrix adjust.
Identities = 213/318 (66%), Positives = 238/318 (74%), Gaps = 3/318 (0%)
Query: 1 MQCFIRRDKSTQTYYLYLSLGSAVLVDNGKFLLSAKRNWHATCTEYVISMNANNLSRSTN 60
+QCFI+RDKSTQTY LYL L SAVLV++GKFLLSAKR ATCTEY I M+A+N SRS+N
Sbjct: 130 IQCFIKRDKSTQTYNLYLCLSSAVLVESGKFLLSAKRYSRATCTEYTIFMSADNTSRSSN 189
Query: 61 TNIGKLRSNFLGTKFVIYDTHTPYNATSDSQSGKTSRRF-SNKGTAKHPCSTYSIANISY 119
IGKLRSN LGTKFVIYDT P N + SQSGKTSRRF S K + K+P STYSIA +SY
Sbjct: 190 MYIGKLRSNLLGTKFVIYDTQPPCNTANVSQSGKTSRRFYSRKVSPKNPSSTYSIAQVSY 249
Query: 120 ELNVFGTRGPRRMCCLMHSIPASSLEAGGTVPSQPDSILAHXXXXXXXXXXXXXXXXXXX 179
ELNV GTRGPRRM C+MHSIPASSLEAGGTVP QPDS+LA
Sbjct: 250 ELNVLGTRGPRRMNCVMHSIPASSLEAGGTVPCQPDSVLAR-SLDESFGSISFSKSSIMD 308
Query: 180 XXMHFSSAQFSDISIGDGPRIGGRVLSDDEECKETPLILQNKAPRWHEQLQCWCLNFRGR 239
+ FSS+++SDIS+G GP +GG+ L D +E KE PLIL+NKAPRWHEQLQCWCLNF+GR
Sbjct: 309 RSIRFSSSRYSDISVG-GPMVGGQALGDSDESKERPLILRNKAPRWHEQLQCWCLNFKGR 367
Query: 240 VTVASVKNFQLIXXXXXXXXXXXXXXXXXXXXXEHDKVILQFGKVAKDMFTMDYHYPLSA 299
VTVASVKNFQL+ +HDKVILQFGKVAKDMFTMDY YPLSA
Sbjct: 368 VTVASVKNFQLVAATQPAAGAPTPSQPAPPPPPDHDKVILQFGKVAKDMFTMDYRYPLSA 427
Query: 300 FQAFAISLSSFDTKLACE 317
FQAFAI LSSFDTKLACE
Sbjct: 428 FQAFAICLSSFDTKLACE 445
>Os05g0437900 Tubby family protein
Length = 445
Score = 364 bits (934), Expect = e-101, Method: Compositional matrix adjust.
Identities = 193/325 (59%), Positives = 225/325 (69%), Gaps = 17/325 (5%)
Query: 1 MQCFIRRDKSTQTYYLYLSLGSAVLVDNGKFLLSAKRNWHATCTEYVISMNANNLSRSTN 60
+QCFI+RDKS TY+LYL L +AVL D+GKFLLSAKR+ TCTEYVISM+A+N+SRS++
Sbjct: 130 IQCFIKRDKSKSTYHLYLCLSTAVLADSGKFLLSAKRHRKTTCTEYVISMDADNISRSSS 189
Query: 61 TNIGKLRSNFLGTKFVIYDTHTPYNATSDSQSGKTSRRF-SNKGTAKHPCSTYSIANISY 119
T IGKLRSNFLGTKF+IYDT YN G++SRRF S K + K P +Y+IA ++Y
Sbjct: 190 TYIGKLRSNFLGTKFIIYDTQPSYNGAVIPPVGRSSRRFNSKKVSPKMPSGSYNIAQVTY 249
Query: 120 ELNVFGTRGPRRMCCLMHSIPASSLEAGGTVPSQPDSILAHXXXXXXXXXXXXXXXXXXX 179
ELNV GTRGPRRM C+MHSIPASS+E GG VP QP+ I+
Sbjct: 250 ELNVLGTRGPRRMHCVMHSIPASSVEPGGIVPGQPEQIVPRAFEESFRSTTSFSKSSIMD 309
Query: 180 XXM------HFSSAQFSDISIGDGPRIGGRVLSDDE-ECKETPLILQNKAPRWHEQLQCW 232
M FSSA+FSDI+ GG + D+E + KE PL+L+NKAPRWHEQLQCW
Sbjct: 310 RSMDFSSSRDFSSARFSDIA-------GGTINGDEEGQNKERPLVLRNKAPRWHEQLQCW 362
Query: 233 CLNFRGRVTVASVKNFQLIXXXXXXXXXXXXXXXXXXXXXEHDKVILQFGKVAKDMFTMD 292
CLNFRGRVT+ASVKNFQLI E DK+ILQFGKVAKDMFTMD
Sbjct: 363 CLNFRGRVTIASVKNFQLI--AAPAQPPAGAPTPSQPAPPEQDKIILQFGKVAKDMFTMD 420
Query: 293 YHYPLSAFQAFAISLSSFDTKLACE 317
Y YPLSAFQAFAI LSSFDTKLACE
Sbjct: 421 YRYPLSAFQAFAICLSSFDTKLACE 445
>Os01g0866800 Similar to F24P17.15 protein (Tubby-like protein TULP9)
Length = 448
Score = 359 bits (921), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 186/327 (56%), Positives = 218/327 (66%), Gaps = 18/327 (5%)
Query: 1 MQCFIRRDKSTQTYYLYLSLGSAVLVDNGKFLLSAKRNWHATCTEYVISMNANNLSRSTN 60
+QC+I+R++S TY+LYL L + V + GKF+L+AKR+ TCTEY ISM + N+SRS+
Sbjct: 130 IQCYIKRNRSKSTYHLYLCLSNVVTAEGGKFVLAAKRHRKTTCTEYTISMVSGNISRSSR 189
Query: 61 TNIGKLRSNFLGTKFVIYDTHTPYNATSDSQSGKTSRRF-SNKGTAKHPCSTYSIANISY 119
TNIGKLRSNFLGTKF+IYDT PYN G+TS+RF S K + K P TY+IA +SY
Sbjct: 190 TNIGKLRSNFLGTKFIIYDTQPPYNGAVVPHVGRTSKRFNSTKVSPKVPSVTYNIAQVSY 249
Query: 120 ELNVFGTRGPRRMCCLMHSIPASSLEAGGTVPSQPDSILAHXXX---------XXXXXXX 170
ELNV GTRGPRRM C+MHSIPASS+E GG VP QP+ I+
Sbjct: 250 ELNVLGTRGPRRMRCMMHSIPASSVEPGGIVPGQPEQIVPRALEDSFRSTTSFSQSFRST 309
Query: 171 XXXXXXXXXXXMHFSSAQFSDISIGDGPRIGGRVLSDDEECKETPLILQNKAPRWHEQLQ 230
M FSSA+FSDIS G +GG D+ E KE PL+L+NK PRWHEQLQ
Sbjct: 310 TSFSKSIMDPSMDFSSARFSDIS---GSIMGG---DDNGEIKERPLVLRNKPPRWHEQLQ 363
Query: 231 CWCLNFRGRVTVASVKNFQLIXXXXXXXXXXXXXXXXXXXXXEHDKVILQFGKVAKDMFT 290
CWCLNFRGRVT+ASVKNFQL+ E KVILQFGKVA+DMFT
Sbjct: 364 CWCLNFRGRVTIASVKNFQLVAAPSPPPAGAPTPSQPGPADPE--KVILQFGKVARDMFT 421
Query: 291 MDYHYPLSAFQAFAISLSSFDTKLACE 317
MDY YPLSAFQAFAI LSSFDTKLACE
Sbjct: 422 MDYRYPLSAFQAFAICLSSFDTKLACE 448
>Os04g0687900 Similar to T24D18.17 protein (Tubby-like protein TULP8)
Length = 462
Score = 341 bits (874), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 185/338 (54%), Positives = 214/338 (63%), Gaps = 23/338 (6%)
Query: 1 MQCFIRRDKSTQTYYLYLSLGSAVLVDNGKFLLSAKRNWHATCTEYVISMNANNLSRSTN 60
+QCFI+RDKS TY+LYL L SAVL + GKFLLSAKR+ T T+Y+ISM++ N+SRS++
Sbjct: 127 IQCFIKRDKSKLTYHLYLCLSSAVLDETGKFLLSAKRSRRTTHTDYIISMDSKNISRSSS 186
Query: 61 TNIGKLRSNFLGTKFVIYDTHTPYNATSDSQSGKTSRRFSN-KGTAKHPCSTYSIANISY 119
IGKLRSNFLGTKF+IYDT PYNA + +TSRRFS+ K + K P Y I ++Y
Sbjct: 187 GYIGKLRSNFLGTKFIIYDTQPPYNARTLCSQERTSRRFSSRKVSPKVPTGCYPIVQVNY 246
Query: 120 ELNVFGTRGPRRMCCLMHSIPASSLEAGGTVPSQPDSILAHX-XXXXXXXXXXXXXXXXX 178
ELNV GTRGPRRM C MHSIPAS++E GG VP QP +L
Sbjct: 247 ELNVLGTRGPRRMQCAMHSIPASAVEPGGIVPGQPKELLPRLFEESFRSMATSFSKYSIT 306
Query: 179 XXXMHFSSAQFSDISIGDGPRIGGRVLSD-DEECKETPLILQNKAPRWHEQLQCWCLNFR 237
FSS++FS+ G G G D D+ KE PL+L+NKAPRWHEQLQCWCLNFR
Sbjct: 307 DHSTDFSSSRFSE--FGGGALQGQEQEQDGDDVNKERPLVLRNKAPRWHEQLQCWCLNFR 364
Query: 238 GRVTVASVKNFQLIXXXXXXXXXXXXX------------------XXXXXXXXEHDKVIL 279
GRVTVASVKNFQLI HD VIL
Sbjct: 365 GRVTVASVKNFQLIAAAPQPSSGAASEPSQAGQAAQQQTQPSQPSSSSSSSSSNHDTVIL 424
Query: 280 QFGKVAKDMFTMDYHYPLSAFQAFAISLSSFDTKLACE 317
QFGKVAKDMFTMDY YPLSAFQAFAI L+SFDTKLACE
Sbjct: 425 QFGKVAKDMFTMDYRYPLSAFQAFAICLTSFDTKLACE 462
>Os08g0103300 Similar to Tubby-like protein 3
Length = 451
Score = 341 bits (874), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 180/327 (55%), Positives = 211/327 (64%), Gaps = 15/327 (4%)
Query: 1 MQCFIRRDKSTQTYYLYLSLGSAVLVDNGKFLLSAKRNWHATCTEYVISMNANNLSRSTN 60
+QCFI+RDKS TYYLYL L AVL +NGKFLL+AKRN AT TEY+IS+++ N+SRS+N
Sbjct: 130 IQCFIKRDKSKLTYYLYLCLSPAVLSENGKFLLAAKRNRRATSTEYIISVDSKNISRSSN 189
Query: 61 TNIGKLRSNFLGTKFVIYDTHTPYNATS--DSQSGKTSRRFSNKGTAKHPCSTYSIANIS 118
+GK+RSNFLGTKFV+YDT PYNA S Q G + K P +Y IA++
Sbjct: 190 GYVGKMRSNFLGTKFVVYDTQPPYNAGSLMSCQHGSRRISSRRV-SPKLPTGSYPIAHVK 248
Query: 119 YELNVFGTRGPRRMCCLMHSIPASSLEAGGTVPSQPDSILAHXXXXXXXXXXXXXXXXXX 178
YELNV GTRGPRRM C MHSIPAS+++ G VP QP+ +L
Sbjct: 249 YELNVLGTRGPRRMQCTMHSIPASAVDPEGVVPGQPEQLLPGPFEESFRSTNTSSRFSFM 308
Query: 179 XXXMHFSSAQFSDISIGDGPRIGGRVLSDDEECKETPLILQNKAPRWHEQLQCWCLNFRG 238
+ FSS++FS+IS G + G D E KE PL+L+NK PRWHEQLQCWCLNFRG
Sbjct: 309 DRSLDFSSSRFSEIS-GSANQQGE---DDIPEAKERPLVLRNKVPRWHEQLQCWCLNFRG 364
Query: 239 RVTVASVKNFQLIXXXXXXXXXXXXXXXXXXXXX--------EHDKVILQFGKVAKDMFT 290
RVTVASVKNFQLI +H KVILQFGKV KDMFT
Sbjct: 365 RVTVASVKNFQLIAAASSESSQLEQQQQQQQQNHASSSSSASDHGKVILQFGKVGKDMFT 424
Query: 291 MDYHYPLSAFQAFAISLSSFDTKLACE 317
MDY YPLSAFQAFAI L+SFDTKLACE
Sbjct: 425 MDYRYPLSAFQAFAICLTSFDTKLACE 451
>Os03g0351400 Similar to Tubby-like protein 3
Length = 296
Score = 297 bits (760), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 150/317 (47%), Positives = 195/317 (61%), Gaps = 36/317 (11%)
Query: 1 MQCFIRRDKSTQTYYLYLSLGSAVLVDNGKFLLSAKRNWHATCTEYVISMNANNLSRSTN 60
++CFIRR+++TQTYYLY+ L A L D+GKFLL+A++ TCT+Y+IS++ +++S+ +N
Sbjct: 16 LKCFIRRNRTTQTYYLYIGLTEA-LADDGKFLLAARKCRKPTCTDYLISLDMSDMSKGSN 74
Query: 61 TNIGKLRSNFLGTKFVIYDTHTPYNATSDSQSGKTSRRFSNKGTAKHPCSTYSIANISYE 120
T IGKLRSNFLGTKF +YD H PY+ S+S N+ + + P Y +++ISYE
Sbjct: 75 TYIGKLRSNFLGTKFTVYDAHPPYDGAVVSKSRSARVVGLNQVSPRVPAGNYPVSHISYE 134
Query: 121 LNVFGTRGPRRMCCLMHSIPASSLEAGGTVPSQPDSILAHXXXXXXXXXXXXXXXXXXXX 180
LNV G RGPRRM C+M SIP S+++ GG P+Q + L+
Sbjct: 135 LNVLGARGPRRMNCIMDSIPTSAVQEGGKAPTQTEFPLSGLDSFPSISFFRSKSARIDSA 194
Query: 181 XMHFSSAQFSDISIGDGPRIGGRVLSDDEECKETPLILQNKAPRWHEQLQCWCLNFRGRV 240
S+ KE L+L+NK+PRWHEQLQCWCLNFRGRV
Sbjct: 195 TSQLSTQ------------------------KEEKLVLKNKSPRWHEQLQCWCLNFRGRV 230
Query: 241 TVASVKNFQLIXXXXXXXXXXXXXXXXXXXXXEHDKVILQFGKVAKDMFTMDYHYPLSAF 300
TVASVKNFQL+ E DKVILQFGK+ KD+FTMDY YP+SAF
Sbjct: 231 TVASVKNFQLV-----------ASDENGPTNQEQDKVILQFGKIGKDLFTMDYRYPISAF 279
Query: 301 QAFAISLSSFDTKLACE 317
Q+FAI LSSFDTK+ACE
Sbjct: 280 QSFAICLSSFDTKIACE 296
>Os07g0667000 Similar to Tubby-like protein 3
Length = 406
Score = 294 bits (753), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 157/318 (49%), Positives = 202/318 (63%), Gaps = 38/318 (11%)
Query: 1 MQCFIRRDKSTQTYYLYLSLGSAVLVDNGKFLLSAKRNWHATCTEYVISMNANNLSRSTN 60
M+CFI R+++TQTYYLY+ L A L D+GKFLL+A++ TCTEY+IS++ N++S+ T+
Sbjct: 126 MKCFIVRNRTTQTYYLYIGLTDA-LTDDGKFLLAARKCRRTTCTEYLISLDMNDISKRTD 184
Query: 61 TNIGKLRSNFLGTKFVIYDTHTPYNATSDSQSGKTSRRF-SNKGTAKHPCSTYSIANISY 119
+ +GKLRSNFLGTKF IYD H PY S+ G+++R SN + + P Y +++ISY
Sbjct: 185 SYVGKLRSNFLGTKFTIYDAHPPYAGDVISK-GQSARVIGSNHLSPRIPAGNYPVSHISY 243
Query: 120 ELNVFGTRGPRRMCCLMHSIPASSLEAGGTVPSQPDSILAHXXXXXXXXXXXXXXXXXXX 179
ELNV G+RGPRRM C M SIP S++E GGT P+Q + L++
Sbjct: 244 ELNVLGSRGPRRMHCAMDSIPVSAIEQGGTAPTQTEFPLSYHES---------------- 287
Query: 180 XXMHFSSAQFSDISIGDGPRIGGRVLSDDEECKETPLILQNKAPRWHEQLQCWCLNFRGR 239
F+S F +L+ + + L+L+NK+PRWHE LQCWCLNF GR
Sbjct: 288 ----FTSIPFFKSKSVRANNSTASLLTQN----GSKLVLKNKSPRWHEHLQCWCLNFHGR 339
Query: 240 VTVASVKNFQLIXXXXXXXXXXXXXXXXXXXXXEHDKVILQFGKVAKDMFTMDYHYPLSA 299
VTVASVKNFQL+ EHD VILQFGKV KDMFTMDY YP+SA
Sbjct: 340 VTVASVKNFQLV-----------ASDESNPTNQEHDDVILQFGKVGKDMFTMDYRYPISA 388
Query: 300 FQAFAISLSSFDTKLACE 317
FQAFAI LSSFDTK+ACE
Sbjct: 389 FQAFAICLSSFDTKIACE 406
>Os01g0759100 Tubby family protein
Length = 368
Score = 187 bits (474), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 121/321 (37%), Positives = 156/321 (48%), Gaps = 80/321 (24%)
Query: 1 MQCFIRRDKSTQTYYLYLSLGSAVLVDNGKFLLSAKRNWHATCTEYVISMNANNLSRSTN 60
MQCFI+R+K T++LYL L + L D+ KFLL+A+R EY I++N++ L +
Sbjct: 122 MQCFIKRNKKNSTFFLYLGL-TQELTDDEKFLLAARRCRRGLHKEYAITINSDGLFHGSQ 180
Query: 61 TNIGKLRSNFLGTKFVIYDTHTPYNATSDSQSGKTSRRFSNKGTAKHPCSTYS-----IA 115
+ +G L+SNF GTKF I D PY + + S ++ R F NK H C S +
Sbjct: 181 SCVGNLKSNFTGTKFTIRDWQPPYEG-AKAFSSRSGRWFGNK----HRCPLVSTGDVEVG 235
Query: 116 NISYELNVFGTRGPRRMCCLMHSIPASSLEAGGTVPSQPDSILAHXXXXXXXXXXXXXXX 175
+SY+ ++ RGPRRM C S+ L+ P
Sbjct: 236 EVSYKYSLLRPRGPRRMSC---SVQCPVLKGTAVDPQ----------------------- 269
Query: 176 XXXXXXMHFSSAQFSDISIGDGPRIGGRVLSDDEECKETPLILQNKAPRWHEQLQCWCLN 235
DG R+ + S L+L +K P WHE LQCWCLN
Sbjct: 270 --------------------DGKRLSNSIPSS--------LVLNSKVPSWHEHLQCWCLN 301
Query: 236 FRGRVTVASVKNFQLIXXXXXXXXXXXXXXXXXXXXXEHDK-VILQFGKVAKDMFTMDYH 294
F GRV VASVKNFQLI DK V+LQFGK+ D+FTMDY
Sbjct: 302 FHGRVMVASVKNFQLI--------------APVEPGEPSDKTVVLQFGKIDDDVFTMDYR 347
Query: 295 YPLSAFQAFAISLSSFDTKLA 315
PLSAFQAFAI LS+F TKLA
Sbjct: 348 QPLSAFQAFAICLSNFGTKLA 368
>Os02g0705300 Tubby family protein
Length = 326
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 70/158 (44%), Positives = 103/158 (65%), Gaps = 2/158 (1%)
Query: 1 MQCFIRRDKSTQTYYLYLSLGSAVLVDNGKFLLSAKRNWHATCTEYVISMNANNLSRSTN 60
+QCF+RRD++T TY LYL L ++ +N K LL+A++ AT T +VIS+ +N+ S S++
Sbjct: 139 VQCFVRRDRATSTYLLYLGLSPSLHGENDKLLLAARKIRRATRTSFVISLVSNDFSLSSS 198
Query: 61 TNIGKLRSNFLGTKFVIYDTHTPYNATSDSQSGKTSRRFSNKGTAKHPCSTYSIANISYE 120
T +GKL+ NFLGTKF I+D+ P +A + + R F + + + P Y++A +SYE
Sbjct: 199 TYVGKLKPNFLGTKFTIFDSQPPCDAVVLPNNRPSKRHF-KQVSPRLPLGNYNVATVSYE 257
Query: 121 LNVFGTRGPRRMCCLMHSIPASSLEAGGTVPSQPDSIL 158
L V RGPRRM C MHSIPA ++ GG P+ P I+
Sbjct: 258 LTVLRNRGPRRMQCTMHSIPALCIQEGGKAPT-PTGII 294
>Os05g0514300 Similar to Tubby-like protein 3
Length = 372
Score = 131 bits (329), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 64/104 (61%), Positives = 71/104 (68%), Gaps = 9/104 (8%)
Query: 214 TPLILQNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLIXXXXXXXXXXXXXXXXXXXXXE 273
+PL L+NKAPRWHE LQCWCLNF GRVTVASVKNFQL+ +
Sbjct: 278 SPLALRNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLV---------APAGTSDPWGIAD 328
Query: 274 HDKVILQFGKVAKDMFTMDYHYPLSAFQAFAISLSSFDTKLACE 317
+ VILQFGK+ D FTMDY PLSAFQAFAI L+SF TKLACE
Sbjct: 329 EETVILQFGKIEDDAFTMDYRQPLSAFQAFAICLTSFGTKLACE 372
Score = 128 bits (321), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 65/135 (48%), Positives = 91/135 (67%), Gaps = 3/135 (2%)
Query: 1 MQCFIRRDKSTQTYYLYLSLGSAVLVDNGKFLLSAKRNWHATCTEYVISMNANNLSRSTN 60
M CFIRR+K T+YLYLSL A L D GKFLL+A+R + TEY+IS + ++L +N
Sbjct: 123 MHCFIRRNKKNSTFYLYLSLTQA-LTDKGKFLLAARRFRNGAHTEYIISYDCDDLFPGSN 181
Query: 61 TNIGKLRSNFLGTKFVIYDTHTPYNATSDSQSGKTSRRFSNKGTAKHPC-STYSIANISY 119
+ +GKLRS+FLGTKF+IYD+ PY+ S+S ++SRRF++K + Y + +SY
Sbjct: 182 SYVGKLRSDFLGTKFIIYDSQPPYDGAKPSRS-QSSRRFASKQINPNVSGGNYEVGQVSY 240
Query: 120 ELNVFGTRGPRRMCC 134
+ N +RGPRRM C
Sbjct: 241 KFNFLKSRGPRRMQC 255
>Os05g0560400 Tubby family protein
Length = 349
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 58/96 (60%), Positives = 66/96 (68%), Gaps = 9/96 (9%)
Query: 217 ILQNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLIXXXXXXXXXXXXXXXXXXXXXEHDK 276
+L+NKAPRWHE LQCWCLNF GRVTVASVKNFQL+ + +
Sbjct: 261 VLRNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLV---------ATADPSHPDSVGDEET 311
Query: 277 VILQFGKVAKDMFTMDYHYPLSAFQAFAISLSSFDT 312
VILQFGKV ++FTMDY PLSAFQAFAI LSSF+T
Sbjct: 312 VILQFGKVDSNIFTMDYRQPLSAFQAFAICLSSFET 347
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 88/143 (61%), Gaps = 7/143 (4%)
Query: 1 MQCFIRRDKSTQTYYLYLSLGSAVLVDNGKFLLSAKRNWHATCTEYVISMNANNLSRSTN 60
+QCF++R+K +YLYL L + + D GKFL++A+R TEYVIS++A++LS+ +N
Sbjct: 96 IQCFVKRNKKKSMFYLYLGLLNGTM-DKGKFLMAARRFRRGPHTEYVISLDADDLSQGSN 154
Query: 61 TNIGKLRSNFLGTKFVIYDTHTPYN-----ATSDSQSGKTSRRFSNKGTAKH-PCSTYSI 114
+GKLRS+F GT F IYD PY+ +T SQ ++ RF ++ +++
Sbjct: 155 AYVGKLRSDFWGTNFKIYDNQPPYDDAKTSSTRSSQRFGSTHRFGSRRICPQISAGNFNV 214
Query: 115 ANISYELNVFGTRGPRRMCCLMH 137
ISY+ N+ +RGPRRM C M
Sbjct: 215 GQISYKYNLLKSRGPRRMFCTME 237
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.132 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 8,856,232
Number of extensions: 308754
Number of successful extensions: 715
Number of sequences better than 1.0e-10: 12
Number of HSP's gapped: 684
Number of HSP's successfully gapped: 18
Length of query: 317
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 216
Effective length of database: 11,762,187
Effective search space: 2540632392
Effective search space used: 2540632392
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 156 (64.7 bits)