BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0104800 Os11g0104800|J090070B04
(289 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os11g0104800 Conserved hypothetical protein 426 e-119
Os12g0104700 Protein of unknown function DUF231, plant doma... 192 2e-49
Os01g0830700 Protein of unknown function DUF231, plant doma... 96 3e-20
Os05g0470000 Protein of unknown function DUF231, plant doma... 89 4e-18
Os03g0291800 Protein of unknown function DUF231, plant doma... 87 1e-17
Os05g0354400 Protein of unknown function DUF231, plant doma... 86 5e-17
Os07g0693600 Protein of unknown function DUF231, plant doma... 79 3e-15
Os03g0817900 Protein of unknown function DUF231, plant doma... 75 4e-14
Os03g0817800 Conserved hypothetical protein 72 5e-13
Os05g0356700 Protein of unknown function DUF231, plant doma... 71 1e-12
Os11g0107000 Protein of unknown function DUF231, plant doma... 70 1e-12
Os12g0106300 Protein of unknown function DUF231, plant doma... 70 2e-12
Os03g0817500 Protein of unknown function DUF231, plant doma... 69 5e-12
Os03g0307700 Protein of unknown function DUF231, plant doma... 65 6e-11
>Os11g0104800 Conserved hypothetical protein
Length = 289
Score = 426 bits (1095), Expect = e-119, Method: Compositional matrix adjust.
Identities = 208/226 (92%), Positives = 208/226 (92%)
Query: 64 VTTLVXXXXXXXXXMYGEDVRTLAELSIDDYLYPDADFYNVSAXXXXXXXXXTCDLSRGR 123
VTTLV MYGEDVRTLAELSIDDYLYPDADFYNVSA TCDLSRGR
Sbjct: 64 VTTLVAAFFLLALFMYGEDVRTLAELSIDDYLYPDADFYNVSALPPLLLPPPTCDLSRGR 123
Query: 124 WVFDNTSLPAYREKECTFLTKQVSCLANGRPDDLWQYWRWQPNNCSLPTYFPFLLVLDLP 183
WVFDNTSLPAYREKECTFLTKQVSCLANGRPDDLWQYWRWQPNNCSLPTYFPFLLVLDLP
Sbjct: 124 WVFDNTSLPAYREKECTFLTKQVSCLANGRPDDLWQYWRWQPNNCSLPTYFPFLLVLDLP 183
Query: 184 FHFFQMDRFELIRLQVRRAAVHGEDAGEEDDVRGGLAESEPVGVAGVPGAAHPIQGQEED 243
FHFFQMDRFELIRLQVRRAAVHGEDAGEEDDVRGGLAESEPVGVAGVPGAAHPIQGQEED
Sbjct: 184 FHFFQMDRFELIRLQVRRAAVHGEDAGEEDDVRGGLAESEPVGVAGVPGAAHPIQGQEED 243
Query: 244 RQARFLQHLLRQGVSRHPRVLLGSIPRRVQLRQPQFPPHRPAHHQP 289
RQARFLQHLLRQGVSRHPRVLLGSIPRRVQLRQPQFPPHRPAHHQP
Sbjct: 244 RQARFLQHLLRQGVSRHPRVLLGSIPRRVQLRQPQFPPHRPAHHQP 289
>Os12g0104700 Protein of unknown function DUF231, plant domain containing protein
Length = 455
Score = 192 bits (489), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 91/110 (82%), Positives = 92/110 (83%)
Query: 64 VTTLVXXXXXXXXXMYGEDVRTLAELSIDDYLYPDADFYNVSAXXXXXXXXXTCDLSRGR 123
VTTLV MYGEDVRTLAELSIDDYLYPDADFYNVSA TCDLSRGR
Sbjct: 43 VTTLVAAFFLLALFMYGEDVRTLAELSIDDYLYPDADFYNVSALPPLLLPPPTCDLSRGR 102
Query: 124 WVFDNTSLPAYREKECTFLTKQVSCLANGRPDDLWQYWRWQPNNCSLPTY 173
WVFDNTSLPAYREKECTFLTKQVSCLANGRPDDLWQYWRWQPNNCSLPT+
Sbjct: 103 WVFDNTSLPAYREKECTFLTKQVSCLANGRPDDLWQYWRWQPNNCSLPTF 152
>Os01g0830700 Protein of unknown function DUF231, plant domain containing protein
Length = 522
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 38/58 (65%), Positives = 47/58 (81%)
Query: 116 TCDLSRGRWVFDNTSLPAYREKECTFLTKQVSCLANGRPDDLWQYWRWQPNNCSLPTY 173
TCDLS+G WVFDNTS P YRE++C FLT QV+C+ NGR DD +Q WRWQP +CS+P +
Sbjct: 170 TCDLSKGEWVFDNTSYPLYREEQCEFLTSQVTCMRNGRRDDTYQKWRWQPKDCSMPRF 227
>Os05g0470000 Protein of unknown function DUF231, plant domain containing protein
Length = 514
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 48/66 (72%)
Query: 116 TCDLSRGRWVFDNTSLPAYREKECTFLTKQVSCLANGRPDDLWQYWRWQPNNCSLPTYFP 175
TC+LS+G+WVFDN + P YRE+EC +LT QV+C NGR DD +Q WRWQP +C LP F
Sbjct: 156 TCNLSKGKWVFDNATYPLYREQECEYLTAQVTCTRNGRRDDGYQKWRWQPRDCDLPLAFD 215
Query: 176 FLLVLD 181
L ++
Sbjct: 216 ARLFME 221
>Os03g0291800 Protein of unknown function DUF231, plant domain containing protein
Length = 574
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 46/64 (71%)
Query: 116 TCDLSRGRWVFDNTSLPAYREKECTFLTKQVSCLANGRPDDLWQYWRWQPNNCSLPTYFP 175
TCDL RG WV+D + P Y+E +C FLT+QV+C+ NGR DD +Q WRWQP +C LP +
Sbjct: 217 TCDLYRGNWVYDEVNAPVYKESQCEFLTEQVTCMRNGRRDDSYQKWRWQPTDCDLPRFDA 276
Query: 176 FLLV 179
LL+
Sbjct: 277 RLLL 280
>Os05g0354400 Protein of unknown function DUF231, plant domain containing protein
Length = 571
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 47/67 (70%)
Query: 116 TCDLSRGRWVFDNTSLPAYREKECTFLTKQVSCLANGRPDDLWQYWRWQPNNCSLPTYFP 175
+CD+ +GRWV+D + P Y+E C FLT+QV+C+ NGR DD +Q WRWQP+ C LP +
Sbjct: 167 SCDVYKGRWVYDEANAPLYKESACEFLTEQVTCMRNGRRDDDYQKWRWQPDGCDLPRFDA 226
Query: 176 FLLVLDL 182
LL+ L
Sbjct: 227 KLLLEKL 233
>Os07g0693600 Protein of unknown function DUF231, plant domain containing protein
Length = 605
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 42/59 (71%), Gaps = 2/59 (3%)
Query: 117 CDLSRGRWVFDNTS--LPAYREKECTFLTKQVSCLANGRPDDLWQYWRWQPNNCSLPTY 173
C+L +GRWV+D P YRE EC FLT+QV+C+ NGR DD +Q WRWQP C LP++
Sbjct: 243 CELYKGRWVYDAAGREAPLYRESECGFLTEQVTCMRNGRRDDSYQRWRWQPEGCDLPSF 301
>Os03g0817900 Protein of unknown function DUF231, plant domain containing protein
Length = 441
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 44/63 (69%)
Query: 117 CDLSRGRWVFDNTSLPAYREKECTFLTKQVSCLANGRPDDLWQYWRWQPNNCSLPTYFPF 176
CD+ G WV+D + P Y E+EC ++ Q++C A+GRPD +Q+WRWQP CSLP++
Sbjct: 97 CDVGVGEWVYDEAARPWYEEEECPYIQPQLTCQAHGRPDTAYQHWRWQPRGCSLPSFNAT 156
Query: 177 LLV 179
L++
Sbjct: 157 LML 159
>Os03g0817800 Conserved hypothetical protein
Length = 100
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%)
Query: 117 CDLSRGRWVFDNTSLPAYREKECTFLTKQVSCLANGRPDDLWQYWRWQPNNCSLP 171
CD+ G WVFD + P Y E+EC ++ ++C A+GRPD +Q WRWQP +CSLP
Sbjct: 45 CDVGEGEWVFDEAARPWYAEEECPYIQPDLTCQAHGRPDAAYQRWRWQPRDCSLP 99
>Os05g0356700 Protein of unknown function DUF231, plant domain containing protein
Length = 454
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 39/57 (68%)
Query: 117 CDLSRGRWVFDNTSLPAYREKECTFLTKQVSCLANGRPDDLWQYWRWQPNNCSLPTY 173
CD+ GRWV D + P YRE +C ++ Q++C A+GRP+ +Q WRWQP C+LP +
Sbjct: 101 CDVFSGRWVRDEAARPLYREADCPYIPAQLACEAHGRPETAYQRWRWQPRGCALPAF 157
>Os11g0107000 Protein of unknown function DUF231, plant domain containing protein
Length = 503
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 40/57 (70%)
Query: 117 CDLSRGRWVFDNTSLPAYREKECTFLTKQVSCLANGRPDDLWQYWRWQPNNCSLPTY 173
C+ S GRWV+DN+S P Y +C+F+ +V+C GR D +Q+WRWQP+ C+LP +
Sbjct: 153 CNWSLGRWVYDNSSRPLYSGLKCSFIFDEVACDKYGRNDTKYQHWRWQPHGCNLPRF 209
>Os12g0106300 Protein of unknown function DUF231, plant domain containing protein
Length = 502
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 39/57 (68%)
Query: 117 CDLSRGRWVFDNTSLPAYREKECTFLTKQVSCLANGRPDDLWQYWRWQPNNCSLPTY 173
C+ S GRWV+DN S P Y +C+F+ +V+C GR D +Q+WRWQP+ C+LP +
Sbjct: 152 CNWSLGRWVYDNASRPLYSGLKCSFIFDEVACDKYGRNDTKYQHWRWQPHGCNLPRF 208
>Os03g0817500 Protein of unknown function DUF231, plant domain containing protein
Length = 473
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 37/57 (64%)
Query: 117 CDLSRGRWVFDNTSLPAYREKECTFLTKQVSCLANGRPDDLWQYWRWQPNNCSLPTY 173
CDL GRWV+D + P YRE C +++Q +C GR D +Q+WRWQP+ C LP +
Sbjct: 108 CDLFSGRWVYDEAAYPLYRESACRVMSEQSACEKYGRTDLRYQHWRWQPHGCDLPRF 164
>Os03g0307700 Protein of unknown function DUF231, plant domain containing protein
Length = 630
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 117 CDLSRGRWVFDNTSLPAYREKECTFLTKQVSCLANGRPDDLWQYWRWQPNNCSLPTY 173
C++ GRWVFD S P Y C F+ + SC ANGR D ++ WRWQP +CS+P +
Sbjct: 286 CNVYDGRWVFDE-SYPLYTSDSCPFIDEGFSCEANGRMDGSYRKWRWQPTHCSIPRF 341
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.323 0.139 0.445
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 8,475,913
Number of extensions: 364014
Number of successful extensions: 1358
Number of sequences better than 1.0e-10: 19
Number of HSP's gapped: 1364
Number of HSP's successfully gapped: 19
Length of query: 289
Length of database: 17,035,801
Length adjustment: 100
Effective length of query: 189
Effective length of database: 11,814,401
Effective search space: 2232921789
Effective search space used: 2232921789
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 155 (64.3 bits)