Os03g0817900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF231, plant domain containing protein.
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Os03g0817900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF231, plant domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 97.74 | 0.465 | 12.1 | -1.76 | 1.61 | -0.95 | -0.361 | -0.764 | -1.03 | 23.3 | 54 | 1369 | -- | -- |
| 98.67 | 0.463 | 12.1 | -1.84 | 1.61 | -0.962 | -0.296 | -- | -1.04 | 23.3 | 47.14 | 1385 | -- | -- |
| 98.25 | 0.462 | 12.1 | -1.75 | 1.62 | -0.935 | -- | -0.715 | -1.03 | 23.4 | 54 | 1387 | -- | -- |
| 99.07 | 0.464 | 12.1 | -1.83 | 1.64 | -0.985 | -- | -- | -1.05 | 23.4 | 53.25 | 1407 | -- | -- |
| 178.9 | 0.623 | 12.1 | -1.89 | -- | -2.49 | -- | 0.535 | -1.06 | -- | 27.6 | 958 | -- | -- |
| 122.68 | 0.519 | 12.1 | -1.79 | 1.68 | -- | -0.16 | -- | -1 | 23.5 | -- | -- | -- | -- |
| 122.79 | 0.519 | 12.1 | -1.79 | 1.68 | -- | -- | -- | -1 | 23.5 | -- | -- | -- | -- |
| 170.34 | 0.608 | 12.1 | -1.71 | -- | -2.28 | -- | -- | -1.18 | -- | 68.35 | 947 | -- | -- |
| 187.48 | 0.638 | 12.1 | -- | 1.56 | -1.19 | -- | -- | -1.11 | 23.5 | 61 | 6738 | -- | -- |
| 299.16 | 0.808 | 12.1 | -1.74 | -- | -- | -- | -- | -0.984 | -- | -- | -- | -- | -- |
| 206.82 | 0.673 | 12 | -- | 1.66 | -- | -- | -- | -0.803 | 23.4 | -- | -- | -- | -- |
| 247.57 | 0.733 | 12.1 | -- | -- | -2.46 | -- | -- | -1.02 | -- | 72.82 | 959 | -- | -- |
| 379.05 | 0.909 | 12 | -- | -- | -- | -- | -- | -0.791 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 91.99 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 6 | 10 |
| 3 | 92.03 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 7 | 8 |
| 8 | 92.29 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 24 | 92.86 | humidity | 80.0 | 1440 | > th | dose independent | sin | 2 | NA |
| 34 | 93.11 | humidity | 80.0 | 1440 | < th | dose independent | sin | 2 | NA |
| 49 | 93.54 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 10 | 4 |
| 76 | 94.12 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 10 | 4 |
| 80 | 94.19 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 10 | 4 |
| 82 | 94.23 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 2 | 3 |
| 85 | 94.34 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 8 |
| 93 | 94.41 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 94 | 94.41 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 8 |
| 97 | 94.41 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 8 |
| 109 | 94.68 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 8 | 9 |
| 131 | 94.94 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 12 | 5 |
| 140 | 95.01 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 142 | 95.02 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 144 | 95.02 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 163 | 95.17 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 192 | 95.51 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 13 |
| 197 | 95.56 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 13 |
| 200 | 95.56 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 13 |
| 210 | 95.64 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 239 | 95.83 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 12 | 8 |
| 252 | 95.94 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 7 |
| 255 | 95.94 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 7 |
| 280 | 96.10 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 23 | NA |
| 288 | 96.14 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 23 | NA |
| 289 | 96.14 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 294 | 96.14 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 23 | NA |
| 320 | 96.26 | humidity | 70.0 | 1440 | > th | dose dependent | sin | 1 | NA |
| 336 | 96.38 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 23 | 8 |
| 358 | 96.51 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 3 |
| 417 | 96.74 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 13 |
| 418 | 96.74 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 13 |
| 430 | 96.77 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 7 |
| 437 | 96.80 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 2 | 17 |
| 439 | 96.82 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 459 | 96.90 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 13 |
| 471 | 96.92 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 19 | 22 |
| 474 | 96.93 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 6 | 14 |
| 480 | 96.95 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 3 |
| 552 | 97.11 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 3 |
| 553 | 97.11 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 3 |
| 576 | 97.19 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 674 | 97.40 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 16 |
| 697 | 97.45 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 716 | 97.50 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 15 | 5 |
| 762 | 97.62 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 773 | 97.64 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 0 | NA |
| 821 | 97.75 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 2 | 15 |
| 826 | 97.75 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 18 | 23 |
| 845 | 97.79 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 23 | 18 |
| 855 | 97.82 | humidity | 90.0 | 1440 | < th | dose dependent | sin | 2 | NA |
| 910 | 97.89 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 7 | 23 |
| 925 | 97.92 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 7 | 20 |
| 954 | 97.96 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 16 |
| 955 | 97.96 | humidity | 50.0 | 1440 | > th | dose dependent | no | NA | NA |
| 957 | 97.96 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 16 |