Os03g0817500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF231, plant domain containing protein.
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Os03g0817500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF231, plant domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 56.31 | 0.349 | 2.96 | 0.0672 | 0.0805 | 2.35 | 0.273 | -13 | -0.0436 | 13 | 7 | 10 | 19 | 1 |
| 56.31 | 0.352 | 2.97 | 0.0988 | 0.0807 | 5.18 | 0.273 | -- | -0.0435 | 13 | 7 | 10 | 19 | 1 |
| 56.62 | 0.35 | 2.96 | 0.0768 | 0.08 | 2.29 | -- | -13.4 | -0.0423 | 12.8 | 7 | 10 | 19.1 | 1.76 |
| 56.63 | 0.353 | 2.97 | 0.109 | 0.0802 | 5.19 | -- | -- | -0.0421 | 12.7 | 7 | 10 | 19 | 1 |
| 57.02 | 0.352 | 2.96 | 0.0734 | -- | 2.23 | -- | -13.6 | -0.0438 | -- | 7.042 | 10 | 19.1 | 1.24 |
| 83 | 0.427 | 2.97 | 0.0493 | 0.0682 | -- | 0.321 | -- | -0.0637 | 13 | -- | -- | -- | -- |
| 83.34 | 0.428 | 2.97 | 0.0617 | 0.0816 | -- | -- | -- | -0.0612 | 15.1 | -- | -- | -- | -- |
| 57.03 | 0.353 | 2.97 | 0.106 | -- | 5.18 | -- | -- | -0.0436 | -- | 7.298 | 3 | 19.3 | 1.13 |
| 56.94 | 0.353 | 2.97 | -- | 0.0785 | 5.17 | -- | -- | -0.0542 | 12.7 | 7 | 10 | 19 | 1 |
| 83.72 | 0.428 | 2.97 | 0.0582 | -- | -- | -- | -- | -0.0633 | -- | -- | -- | -- | -- |
| 83.44 | 0.427 | 2.98 | -- | 0.0803 | -- | -- | -- | -0.0681 | 15.1 | -- | -- | -- | -- |
| 57.32 | 0.354 | 2.97 | -- | -- | 5.15 | -- | -- | -0.0554 | -- | 7.298 | 3 | 19.3 | 1.13 |
| 83.81 | 0.427 | 2.98 | -- | -- | -- | -- | -- | -0.0698 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 56.31 | wind | 7 | 10 | > th | dose independent | rect. | 19 | 1 |
| 3 | 56.31 | wind | 7 | 10 | > th | dose dependent | rect. | 19 | 1 |
| 123 | 69.43 | wind | 9 | 270 | > th | dose independent | rect. | 16 | 4 |
| 128 | 69.51 | wind | 5 | 30 | > th | dose dependent | rect. | 19 | 5 |
| 143 | 70.22 | wind | 9 | 270 | > th | dose dependent | rect. | 16 | 1 |
| 155 | 70.35 | wind | 9 | 270 | > th | dose independent | rect. | 16 | 1 |
| 158 | 70.45 | wind | 9 | 270 | > th | dose dependent | rect. | 16 | 4 |
| 246 | 72.33 | wind | 9 | 1440 | > th | dose independent | rect. | 19 | 1 |
| 247 | 72.33 | wind | 9 | 1440 | > th | dose dependent | rect. | 19 | 1 |
| 292 | 72.95 | wind | 7 | 30 | > th | dose independent | sin | 11 | NA |
| 331 | 73.22 | atmosphere | 1005 | 30 | > th | dose dependent | rect. | 19 | 1 |
| 400 | 73.96 | wind | 7 | 30 | < th | dose independent | sin | 11 | NA |
| 425 | 74.20 | wind | 9 | 270 | > th | dose independent | sin | 13 | NA |
| 436 | 74.44 | wind | 9 | 270 | < th | dose independent | sin | 13 | NA |
| 497 | 74.97 | wind | 9 | 270 | > th | dose dependent | sin | 13 | NA |
| 507 | 75.16 | atmosphere | 1005 | 90 | > th | dose independent | rect. | 19 | 1 |
| 565 | 75.48 | temperature | 20 | 1440 | < th | dose independent | rect. | 10 | 5 |
| 588 | 75.60 | temperature | 20 | 1440 | > th | dose independent | rect. | 11 | 5 |
| 589 | 75.61 | temperature | 20 | 1440 | < th | dose independent | rect. | 9 | 9 |
| 598 | 75.66 | temperature | 20 | 1440 | > th | dose independent | rect. | 9 | 9 |
| 605 | 75.69 | temperature | 20 | 1440 | < th | dose dependent | rect. | 12 | 3 |
| 673 | 75.96 | wind | 9 | 4320 | > th | dose independent | rect. | 3 | 1 |
| 705 | 75.96 | wind | 9 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 771 | 76.00 | temperature | 20 | 1440 | < th | dose dependent | rect. | 19 | 1 |
| 776 | 76.04 | temperature | 20 | 1440 | < th | dose dependent | rect. | 9 | 11 |
| 822 | 76.28 | temperature | 20 | 720 | < th | dose dependent | rect. | 7 | 1 |
| 837 | 76.49 | humidity | 90 | 1440 | < th | dose independent | rect. | 12 | 1 |
| 839 | 76.51 | humidity | 90 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 849 | 76.54 | humidity | 90 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 911 | 76.81 | wind | 1 | 720 | < th | dose dependent | rect. | 7 | 3 |
| 932 | 76.92 | temperature | 20 | 1440 | < th | dose dependent | rect. | 7 | 16 |
| 935 | 76.93 | radiation | 1 | 4320 | < th | dose dependent | rect. | 20 | 2 |