Os12g0104700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF231, plant domain containing protein.
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Os12g0104700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF231, plant domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 57 | 0.355 | 7.65 | 1.4 | 1.4 | -0.00935 | -0.267 | -3.74 | 0.234 | 5.63 | 29.2 | 3928 | -- | -- |
| 60.28 | 0.362 | 7.73 | 0.761 | 1.44 | -0.279 | -0.104 | -- | 0.172 | 5.28 | 32.1 | 5939 | -- | -- |
| 57.18 | 0.352 | 7.65 | 1.4 | 1.4 | -0.00877 | -- | -3.73 | 0.235 | 5.62 | 29.16 | 3930 | -- | -- |
| 58.58 | 0.356 | 7.74 | 0.596 | 1.42 | -0.371 | -- | -- | 0.106 | 5.52 | 31.9 | 5937 | -- | -- |
| 155.23 | 0.58 | 7.6 | 2.08 | -- | 0.208 | -- | -5.65 | 0.392 | -- | 29.4 | 2704 | -- | -- |
| 65.04 | 0.378 | 7.74 | 0.71 | 1.42 | -- | -0.217 | -- | 0.0841 | 5.55 | -- | -- | -- | -- |
| 65.15 | 0.378 | 7.74 | 0.709 | 1.42 | -- | -- | -- | 0.085 | 5.54 | -- | -- | -- | -- |
| 159.03 | 0.587 | 7.77 | 0.587 | -- | -0.427 | -- | -- | 0.0851 | -- | 32 | 7025 | -- | -- |
| 66.73 | 0.38 | 7.79 | -- | 1.35 | -0.364 | -- | -- | -0.0513 | 5.46 | 31.6 | 27479 | -- | -- |
| 170.34 | 0.61 | 7.76 | 0.756 | -- | -- | -- | -- | 0.12 | -- | -- | -- | -- | -- |
| 78.41 | 0.414 | 7.76 | -- | 1.43 | -- | -- | -- | 0.00599 | 5.52 | -- | -- | -- | -- |
| 166.47 | 0.601 | 7.83 | -- | -- | -0.642 | -- | -- | -0.208 | -- | 24.13 | 47520 | -- | -- |
| 185.41 | 0.636 | 7.78 | -- | -- | -- | -- | -- | 0.0357 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 54.89 | wind | 5 | 90 | < th | dose independent | rect. | 6 | 21 |
| 2 | 55.23 | wind | 7 | 270 | < th | dose independent | rect. | 14 | 11 |
| 6 | 55.66 | wind | 9 | 270 | < th | dose dependent | rect. | 14 | 10 |
| 8 | 55.83 | wind | 9 | 90 | < th | dose dependent | rect. | 6 | 21 |
| 17 | 56.22 | humidity | 90 | 90 | > th | dose dependent | rect. | 24 | 6 |
| 19 | 56.23 | humidity | 70 | 14400 | < th | dose independent | rect. | 18 | 4 |
| 34 | 56.27 | atmosphere | 1010 | 270 | < th | dose dependent | rect. | 24 | 5 |
| 41 | 56.43 | humidity | 70 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 42 | 56.44 | humidity | 90 | 90 | > th | dose independent | rect. | 24 | 6 |
| 43 | 56.45 | humidity | 70 | 14400 | > th | dose independent | rect. | 18 | 7 |
| 50 | 56.46 | humidity | 70 | 14400 | > th | dose independent | rect. | 18 | 4 |
| 54 | 56.46 | atmosphere | 1010 | 270 | < th | dose dependent | rect. | 1 | 2 |
| 105 | 56.72 | atmosphere | 1015 | 90 | < th | dose dependent | rect. | 3 | 3 |
| 109 | 56.76 | humidity | 70 | 14400 | < th | dose independent | rect. | 16 | 5 |
| 147 | 56.88 | humidity | 70 | 14400 | > th | dose independent | rect. | 16 | 5 |
| 153 | 56.88 | humidity | 70 | 14400 | > th | dose independent | rect. | 16 | 8 |
| 192 | 56.91 | humidity | 60 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 227 | 56.98 | humidity | 70 | 14400 | < th | dose independent | sin | 13 | NA |
| 241 | 57.02 | humidity | 80 | 30 | > th | dose dependent | rect. | 3 | 3 |
| 284 | 57.11 | wind | 7 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 289 | 57.12 | radiation | 10 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 317 | 57.15 | wind | 1 | 43200 | > th | dose dependent | rect. | 1 | 5 |
| 319 | 57.15 | radiation | 20 | 30 | < th | dose dependent | rect. | 6 | 21 |
| 322 | 57.16 | humidity | 90 | 270 | > th | dose dependent | rect. | 20 | 9 |
| 334 | 57.17 | humidity | 90 | 270 | > th | dose dependent | rect. | 18 | 11 |
| 342 | 57.18 | wind | 9 | 43200 | < th | dose dependent | rect. | 1 | 5 |
| 346 | 57.19 | wind | 1 | 43200 | > th | dose dependent | rect. | 4 | 1 |
| 353 | 57.21 | humidity | 70 | 14400 | > th | dose independent | sin | 12 | NA |
| 442 | 57.30 | humidity | 90 | 270 | > th | dose dependent | rect. | 12 | 17 |
| 444 | 57.30 | humidity | 90 | 90 | > th | dose dependent | rect. | 24 | 22 |
| 462 | 57.35 | radiation | 20 | 14400 | > th | dose independent | rect. | 16 | 2 |
| 504 | 57.41 | temperature | 25 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 536 | 57.49 | humidity | 90 | 90 | > th | dose independent | rect. | 3 | 3 |
| 547 | 57.49 | temperature | 25 | 1440 | > th | dose dependent | rect. | 4 | 3 |
| 563 | 57.50 | radiation | 30 | 1440 | > th | dose dependent | rect. | 14 | 19 |
| 617 | 57.54 | humidity | 70 | 14400 | < th | dose independent | rect. | 15 | 22 |
| 692 | 57.61 | radiation | 20 | 14400 | < th | dose independent | rect. | 16 | 4 |
| 695 | 57.61 | radiation | 20 | 14400 | < th | dose independent | rect. | 16 | 10 |
| 698 | 57.61 | radiation | 20 | 14400 | < th | dose independent | rect. | 16 | 12 |
| 721 | 57.62 | radiation | 20 | 14400 | < th | dose independent | rect. | 16 | 2 |
| 724 | 57.62 | radiation | 20 | 14400 | < th | dose independent | rect. | 16 | 8 |
| 757 | 57.63 | radiation | 10 | 30 | < th | dose independent | rect. | 6 | 21 |
| 764 | 57.63 | radiation | 10 | 4320 | < th | dose dependent | rect. | 18 | 14 |
| 824 | 57.67 | humidity | 70 | 14400 | > th | dose independent | rect. | 15 | 20 |
| 841 | 57.69 | humidity | 70 | 14400 | < th | dose independent | no | NA | NA |
| 843 | 57.69 | wind | 7 | 720 | < th | dose independent | rect. | 13 | 5 |
| 904 | 57.69 | humidity | 90 | 90 | > th | dose dependent | sin | 8 | NA |
| 907 | 57.69 | wind | 9 | 90 | < th | dose dependent | rect. | 17 | 10 |
| 928 | 57.70 | humidity | 90 | 270 | > th | dose dependent | rect. | 1 | 2 |
| 938 | 57.70 | humidity | 90 | 90 | > th | dose dependent | rect. | 24 | 17 |
| 945 | 57.71 | humidity | 80 | 14400 | < th | dose dependent | sin | 15 | NA |
| 980 | 57.73 | temperature | 10 | 30 | > th | dose dependent | rect. | 3 | 3 |
| 985 | 57.73 | humidity | 90 | 90 | > th | dose dependent | rect. | 24 | 15 |
| 990 | 57.74 | humidity | 60 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 995 | 57.74 | radiation | 30 | 1440 | > th | dose independent | rect. | 15 | 18 |