Os05g0470000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF231, plant domain containing protein.
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Os05g0470000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF231, plant domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 267.67 | 0.769 | 10.7 | -3.52 | 1.02 | 2.5 | 0.873 | -12.8 | 0.0345 | 1.6 | 31.77 | 1168 | -- | -- |
| 280.34 | 0.78 | 10.4 | -1.49 | 1.06 | 0.966 | 0.918 | -- | 0.000491 | 1.3 | 33.9 | 2692 | -- | -- |
| 270.57 | 0.766 | 10.7 | -3.51 | 1.01 | 2.48 | -- | -12.5 | 0.0339 | 1.42 | 31.78 | 1166 | -- | -- |
| 283.03 | 0.784 | 10.4 | -1.54 | 1.05 | 0.976 | -- | -- | 0.0157 | 1.3 | 33.9 | 2699 | -- | -- |
| 331.48 | 0.848 | 10.6 | -3.38 | -- | 2.58 | -- | -11.6 | 0.0981 | -- | 31.42 | 1153 | -- | -- |
| 325.7 | 0.846 | 10.5 | -1.26 | 1.17 | -- | 1.08 | -- | -0.152 | 1.48 | -- | -- | -- | -- |
| 330.28 | 0.851 | 10.5 | -1.3 | 1.17 | -- | -- | -- | -0.157 | 1.32 | -- | -- | -- | -- |
| 335.99 | 0.854 | 10.4 | -1.57 | -- | 1.23 | -- | -- | 0.0669 | -- | 32.28 | 1087 | -- | -- |
| 343.26 | 0.863 | 10.4 | -- | 1.05 | 0.818 | -- | -- | 0.159 | 1.22 | 33.9 | 2760 | -- | -- |
| 414.87 | 0.952 | 10.5 | -1.25 | -- | -- | -- | -- | -0.133 | -- | -- | -- | -- | -- |
| 374.56 | 0.905 | 10.4 | -- | 1.15 | -- | -- | -- | -0.0128 | 1.28 | -- | -- | -- | -- |
| 397.39 | 0.928 | 10.4 | -- | -- | 1.09 | -- | -- | 0.208 | -- | 32.24 | 1086 | -- | -- |
| 456.11 | 0.997 | 10.4 | -- | -- | -- | -- | -- | 0.00589 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 264.27 | humidity | 50 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 2 | 264.30 | humidity | 50 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 4 | 265.11 | humidity | 60 | 4320 | < th | dose dependent | rect. | 16 | 4 |
| 18 | 265.25 | humidity | 50 | 4320 | > th | dose independent | rect. | 15 | 2 |
| 20 | 265.32 | temperature | 30 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 37 | 266.61 | radiation | 1 | 720 | > th | dose dependent | rect. | 18 | 11 |
| 40 | 266.91 | humidity | 50 | 4320 | > th | dose independent | rect. | 15 | 12 |
| 45 | 267.01 | humidity | 50 | 4320 | < th | dose independent | rect. | 15 | 19 |
| 47 | 267.02 | humidity | 50 | 4320 | < th | dose dependent | rect. | 16 | 19 |
| 78 | 267.11 | humidity | 50 | 4320 | > th | dose independent | rect. | 15 | 5 |
| 81 | 267.16 | humidity | 50 | 4320 | > th | dose independent | rect. | 15 | 18 |
| 89 | 267.25 | temperature | 30 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 105 | 267.60 | humidity | 50 | 4320 | < th | dose independent | sin | 11 | NA |
| 108 | 267.83 | radiation | 1 | 720 | > th | dose independent | rect. | 18 | 11 |
| 111 | 268.27 | humidity | 70 | 720 | < th | dose dependent | rect. | 18 | 1 |
| 125 | 268.60 | humidity | 60 | 720 | < th | dose independent | rect. | 18 | 1 |
| 159 | 268.68 | humidity | 50 | 4320 | > th | dose independent | sin | 12 | NA |
| 198 | 268.96 | radiation | 1 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 222 | 269.77 | temperature | 30 | 720 | > th | dose independent | rect. | 18 | 1 |
| 237 | 269.79 | radiation | 1 | 720 | > th | dose independent | rect. | 18 | 1 |
| 283 | 270.14 | humidity | 50 | 4320 | > th | dose independent | rect. | 13 | 4 |
| 401 | 270.89 | radiation | 1 | 270 | < th | dose dependent | rect. | 5 | 20 |
| 448 | 271.38 | humidity | 50 | 4320 | < th | dose independent | rect. | 11 | 6 |
| 528 | 272.00 | temperature | 30 | 720 | < th | dose independent | rect. | 17 | 8 |
| 657 | 273.01 | humidity | 60 | 1440 | < th | dose dependent | sin | 12 | NA |
| 840 | 273.91 | radiation | 30 | 4320 | > th | dose independent | rect. | 16 | 16 |
| 842 | 273.92 | temperature | 30 | 1440 | > th | dose dependent | rect. | 16 | 19 |
| 853 | 274.04 | temperature | 30 | 1440 | > th | dose dependent | sin | 11 | NA |
| 912 | 274.44 | radiation | 30 | 4320 | < th | dose independent | rect. | 22 | 10 |
| 935 | 274.63 | radiation | 30 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 960 | 274.74 | radiation | 30 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 961 | 274.78 | radiation | 30 | 4320 | < th | dose independent | rect. | 19 | 13 |
| 963 | 274.83 | temperature | 30 | 720 | < th | dose independent | rect. | 17 | 16 |