Os11g0104800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0104800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69.55 | 0.392 | 8.31 | 0.563 | 1.04 | 0.888 | 0.552 | -1.46 | 0.253 | 5.79 | 92.88 | 124 | -- | -- |
| 71.59 | 0.394 | 8.3 | 0.557 | 1.01 | 0.974 | 0.28 | -- | 0.247 | 5.77 | 93.41 | 110 | -- | -- |
| 70.03 | 0.39 | 8.31 | 0.561 | 1.03 | 0.931 | -- | -1.1 | 0.252 | 5.87 | 92.97 | 114 | -- | -- |
| 71.41 | 0.394 | 8.31 | 0.56 | 1.02 | 0.945 | -- | -- | 0.238 | 5.84 | 93.4 | 110 | -- | -- |
| 106.56 | 0.481 | 8.29 | 0.517 | -- | 1.45 | -- | -0.536 | 0.402 | -- | 89.94 | 218 | -- | -- |
| 82.17 | 0.425 | 8.32 | 0.624 | 1.29 | -- | 0.469 | -- | 0.141 | 5.56 | -- | -- | -- | -- |
| 82.71 | 0.426 | 8.32 | 0.627 | 1.29 | -- | -- | -- | 0.139 | 5.58 | -- | -- | -- | -- |
| 107.11 | 0.482 | 8.29 | 0.494 | -- | 1.41 | -- | -- | 0.387 | -- | 89.7 | 222 | -- | -- |
| 79.57 | 0.415 | 8.32 | -- | 1.01 | 0.982 | -- | -- | 0.19 | 5.85 | 93.17 | 110 | -- | -- |
| 169.26 | 0.608 | 8.34 | 0.669 | -- | -- | -- | -- | 0.171 | -- | -- | -- | -- | -- |
| 93.06 | 0.451 | 8.34 | -- | 1.3 | -- | -- | -- | 0.0696 | 5.56 | -- | -- | -- | -- |
| 113.45 | 0.496 | 8.31 | -- | -- | 1.45 | -- | -- | 0.331 | -- | 89.28 | 247 | -- | -- |
| 181.05 | 0.628 | 8.36 | -- | -- | -- | -- | -- | 0.0964 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 66.95 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 6 | 21 |
| 7 | 68.10 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 24 | 7 |
| 16 | 69.26 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 24 | 22 |
| 18 | 69.28 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 3 | 3 |
| 19 | 69.28 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 24 | 11 |
| 21 | 69.31 | wind | 5.0 | 90 | < th | dose independent | rect. | 6 | 21 |
| 35 | 69.51 | humidity | 90.0 | 90 | > th | dose dependent | sin | 7 | NA |
| 52 | 69.79 | humidity | 90.0 | 90 | > th | dose independent | rect. | 3 | 3 |
| 54 | 69.80 | wind | 7.0 | 90 | < th | dose independent | rect. | 5 | 23 |
| 61 | 69.86 | humidity | 90.0 | 90 | > th | dose independent | rect. | 1 | 5 |
| 63 | 69.87 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 20 | 10 |
| 64 | 69.88 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 1 | 2 |
| 69 | 69.93 | wind | 9.0 | 90 | < th | dose dependent | rect. | 6 | 21 |
| 71 | 69.97 | humidity | 90.0 | 270 | > th | dose independent | rect. | 1 | 1 |
| 72 | 69.97 | temperature | 25.0 | 90 | < th | dose independent | rect. | 3 | 3 |
| 73 | 69.99 | wind | 7.0 | 270 | < th | dose independent | rect. | 14 | 11 |
| 82 | 70.03 | temperature | 25.0 | 90 | < th | dose independent | rect. | 1 | 5 |
| 83 | 70.03 | temperature | 30.0 | 30 | < th | dose independent | rect. | 14 | 16 |
| 118 | 70.25 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 10 | 19 |
| 119 | 70.26 | wind | 3.0 | 30 | < th | dose dependent | rect. | 3 | 3 |
| 201 | 70.71 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 2 |
| 203 | 70.74 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 14 | 16 |
| 241 | 70.96 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 6 | 14 |
| 269 | 71.10 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 3 | 19 |
| 274 | 71.12 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 3 | 8 |
| 283 | 71.14 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 16 | 14 |
| 287 | 71.16 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 20 | 15 |
| 301 | 71.23 | radiation | 10.0 | 30 | < th | dose independent | rect. | 6 | 21 |
| 318 | 71.32 | wind | 9.0 | 270 | < th | dose dependent | rect. | 14 | 10 |
| 382 | 71.50 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 3 |
| 384 | 71.50 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 3 |
| 444 | 71.62 | radiation | 10.0 | 30 | < th | dose independent | rect. | 3 | 3 |
| 445 | 71.62 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 6 | 21 |
| 450 | 71.62 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 6 | 21 |
| 459 | 71.64 | humidity | 60.0 | 30 | > th | dose independent | rect. | 14 | 16 |
| 499 | 71.72 | wind | 1.0 | 90 | < th | dose independent | rect. | 4 | 1 |
| 517 | 71.75 | humidity | 90.0 | 90 | > th | dose dependent | no | NA | NA |
| 525 | 71.77 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 3 | 3 |
| 548 | 71.83 | wind | 7.0 | 30 | < th | dose independent | rect. | 3 | 3 |
| 572 | 71.89 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 3 |
| 575 | 71.89 | humidity | 50.0 | 30 | > th | dose independent | rect. | 3 | 3 |
| 578 | 71.89 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 3 | 3 |
| 579 | 71.89 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 3 | 3 |
| 585 | 71.89 | temperature | 10.0 | 30 | > th | dose independent | rect. | 6 | 21 |
| 592 | 71.91 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 3 | 3 |
| 604 | 71.94 | radiation | 20.0 | 30 | < th | dose dependent | rect. | 6 | 21 |
| 611 | 71.96 | humidity | 90.0 | 90 | > th | dose independent | rect. | 24 | 11 |
| 661 | 72.07 | humidity | 50.0 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 672 | 72.10 | humidity | 70.0 | 10 | > th | dose independent | rect. | 16 | 14 |
| 676 | 72.11 | wind | 7.0 | 10 | < th | dose independent | rect. | 6 | 14 |
| 677 | 72.11 | temperature | 25.0 | 90 | < th | dose independent | rect. | 1 | 21 |
| 701 | 72.14 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 3 | 23 |
| 703 | 72.16 | humidity | 50.0 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 725 | 72.20 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 20 | 10 |
| 726 | 72.20 | wind | 9.0 | 90 | < th | dose dependent | rect. | 6 | 13 |
| 774 | 72.31 | radiation | 40.0 | 30 | < th | dose dependent | rect. | 3 | 3 |
| 802 | 72.38 | humidity | 90.0 | 90 | > th | dose independent | sin | 7 | NA |
| 827 | 72.44 | wind | 9.0 | 90 | < th | dose dependent | rect. | 17 | 10 |
| 851 | 72.51 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 24 | 7 |
| 886 | 72.61 | temperature | 25.0 | 90 | > th | dose independent | rect. | 24 | 8 |
| 900 | 72.67 | humidity | 90.0 | 90 | > th | dose independent | rect. | 3 | 8 |
| 904 | 72.68 | temperature | 25.0 | 90 | < th | dose independent | rect. | 3 | 19 |
| 941 | 72.77 | atmosphere | 1010.0 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 947 | 72.81 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 12 | 7 |
| 975 | 72.84 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 6 | 21 |