Os01g0830700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF231, plant domain containing protein.
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Os01g0830700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF231, plant domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 148.99 | 0.573 | 11.6 | 0.63 | 1.52 | -0.806 | 0.327 | -5.3 | 0.276 | 0.747 | 10.32 | 5634 | -- | -- |
| 161.85 | 0.597 | 11.4 | 1.71 | 1.16 | -0.971 | 0.0818 | -- | 0.622 | 0.052 | 23.42 | 52 | -- | -- |
| 149.25 | 0.569 | 11.6 | 0.619 | 1.5 | -0.812 | -- | -5.3 | 0.278 | 0.746 | 9.43 | 5882 | -- | -- |
| 160.83 | 0.591 | 11.4 | 1.72 | 1.19 | -0.984 | -- | -- | 0.628 | 23.9 | 23.28 | 65 | -- | -- |
| 235.42 | 0.719 | 11.4 | 1.4 | -- | -2.01 | -- | -4.09 | 0.635 | -- | 9.43 | 5882 | -- | -- |
| 176.67 | 0.623 | 11.4 | 1.54 | 1.47 | -- | 0.209 | -- | 0.488 | 0.701 | -- | -- | -- | -- |
| 176.86 | 0.623 | 11.4 | 1.53 | 1.47 | -- | -- | -- | 0.487 | 0.71 | -- | -- | -- | -- |
| 225.86 | 0.7 | 11.4 | 1.89 | -- | -1.85 | -- | -- | 0.784 | -- | 23.1 | 3 | -- | -- |
| 234.19 | 0.717 | 11.5 | -- | 1.32 | -0.528 | -- | -- | 0.361 | 0.448 | 24.5 | 90 | -- | -- |
| 312.41 | 0.826 | 11.4 | 1.58 | -- | -- | -- | -- | 0.513 | -- | -- | -- | -- | -- |
| 238.7 | 0.723 | 11.5 | -- | 1.5 | -- | -- | -- | 0.316 | 0.758 | -- | -- | -- | -- |
| 316.4 | 0.831 | 11.4 | -- | -- | -1.57 | -- | -- | 0.458 | -- | 24.5 | 90 | -- | -- |
| 378.64 | 0.908 | 11.5 | -- | -- | -- | -- | -- | 0.337 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 139.69 | radiation | 10 | 4320 | < th | dose dependent | rect. | 23 | 6 |
| 4 | 142.69 | humidity | 70 | 43200 | > th | dose dependent | rect. | 17 | 9 |
| 7 | 142.92 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 9 |
| 17 | 143.58 | wind | 1 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 22 | 143.76 | humidity | 70 | 43200 | > th | dose dependent | sin | 14 | NA |
| 23 | 143.81 | humidity | 90 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 27 | 143.96 | humidity | 80 | 43200 | > th | dose dependent | rect. | 20 | 7 |
| 31 | 144.01 | wind | 1 | 14400 | < th | dose independent | rect. | 2 | 1 |
| 35 | 144.21 | humidity | 80 | 43200 | > th | dose dependent | rect. | 21 | 5 |
| 63 | 145.21 | humidity | 70 | 43200 | > th | dose dependent | rect. | 21 | 2 |
| 64 | 145.22 | humidity | 80 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 77 | 145.51 | humidity | 80 | 43200 | > th | dose dependent | rect. | 23 | 1 |
| 82 | 145.63 | radiation | 10 | 4320 | < th | dose dependent | rect. | 19 | 10 |
| 89 | 145.75 | wind | 9 | 43200 | > th | dose dependent | rect. | 20 | 11 |
| 90 | 145.76 | wind | 1 | 14400 | > th | dose independent | rect. | 2 | 1 |
| 103 | 146.13 | wind | 7 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 105 | 146.15 | humidity | 90 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 109 | 146.21 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 13 |
| 121 | 146.46 | radiation | 40 | 43200 | < th | dose dependent | rect. | 23 | 6 |
| 131 | 146.65 | humidity | 50 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 135 | 146.67 | wind | 7 | 4320 | > th | dose independent | rect. | 17 | 2 |
| 137 | 146.68 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 13 |
| 166 | 147.08 | humidity | 80 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 187 | 147.24 | humidity | 70 | 43200 | > th | dose dependent | rect. | 17 | 19 |
| 217 | 147.51 | humidity | 90 | 43200 | < th | dose independent | rect. | 1 | 4 |
| 220 | 147.52 | wind | 3 | 43200 | > th | dose dependent | rect. | 7 | 2 |
| 229 | 147.64 | wind | 7 | 4320 | < th | dose independent | rect. | 17 | 2 |
| 233 | 147.68 | wind | 5 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 241 | 147.76 | radiation | 10 | 4320 | < th | dose dependent | rect. | 4 | 1 |
| 245 | 147.80 | wind | 5 | 43200 | < th | dose independent | rect. | 6 | 3 |
| 247 | 147.82 | humidity | 80 | 43200 | > th | dose independent | rect. | 11 | 18 |
| 258 | 147.90 | wind | 5 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 279 | 148.02 | wind | 5 | 43200 | > th | dose independent | rect. | 6 | 4 |
| 284 | 148.07 | humidity | 80 | 43200 | > th | dose independent | rect. | 10 | 20 |
| 305 | 148.21 | humidity | 80 | 43200 | < th | dose independent | rect. | 11 | 17 |
| 308 | 148.22 | radiation | 40 | 43200 | < th | dose dependent | rect. | 19 | 10 |
| 315 | 148.26 | wind | 7 | 4320 | > th | dose dependent | rect. | 17 | 2 |
| 320 | 148.30 | radiation | 1 | 4320 | < th | dose independent | rect. | 23 | 6 |
| 345 | 148.43 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 374 | 148.58 | humidity | 80 | 43200 | > th | dose independent | rect. | 23 | 19 |
| 375 | 148.58 | wind | 7 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 415 | 148.76 | humidity | 80 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 447 | 148.88 | humidity | 80 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 449 | 148.88 | humidity | 80 | 43200 | > th | dose independent | rect. | 24 | 17 |
| 461 | 148.92 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 16 |
| 491 | 149.03 | humidity | 80 | 43200 | > th | dose independent | rect. | 23 | 22 |
| 508 | 149.09 | humidity | 80 | 43200 | < th | dose independent | rect. | 23 | 18 |
| 509 | 149.10 | radiation | 1 | 1440 | > th | dose independent | rect. | 9 | 4 |
| 516 | 149.13 | wind | 9 | 43200 | > th | dose independent | rect. | 20 | 4 |
| 562 | 149.34 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 567 | 149.36 | temperature | 20 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 574 | 149.38 | temperature | 20 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 616 | 149.51 | wind | 9 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 617 | 149.51 | wind | 9 | 43200 | > th | dose dependent | rect. | 20 | 4 |
| 625 | 149.52 | radiation | 1 | 14400 | < th | dose dependent | rect. | 7 | 11 |
| 639 | 149.59 | humidity | 80 | 14400 | < th | dose independent | rect. | 15 | 8 |
| 640 | 149.59 | humidity | 80 | 14400 | < th | dose independent | rect. | 14 | 12 |
| 661 | 149.63 | humidity | 80 | 14400 | > th | dose independent | rect. | 15 | 8 |
| 664 | 149.64 | humidity | 80 | 14400 | > th | dose independent | rect. | 14 | 10 |
| 666 | 149.65 | humidity | 80 | 43200 | < th | dose independent | rect. | 22 | 22 |
| 686 | 149.71 | wind | 9 | 43200 | < th | dose independent | rect. | 20 | 4 |
| 691 | 149.72 | radiation | 1 | 14400 | < th | dose independent | rect. | 7 | 11 |
| 728 | 149.82 | humidity | 70 | 43200 | > th | dose dependent | no | NA | NA |
| 754 | 149.90 | radiation | 10 | 43200 | < th | dose dependent | rect. | 3 | 2 |
| 779 | 149.96 | humidity | 80 | 43200 | < th | dose independent | rect. | 24 | 16 |
| 800 | 149.99 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 7 |
| 805 | 149.99 | temperature | 10 | 4320 | > th | dose dependent | rect. | 23 | 17 |
| 828 | 150.03 | radiation | 10 | 1440 | < th | dose dependent | rect. | 9 | 14 |
| 836 | 150.04 | temperature | 20 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 837 | 150.04 | temperature | 20 | 43200 | < th | dose independent | rect. | 19 | 3 |
| 847 | 150.05 | temperature | 20 | 43200 | > th | dose independent | rect. | 12 | 11 |
| 857 | 150.07 | temperature | 25 | 43200 | < th | dose dependent | rect. | 16 | 2 |
| 898 | 150.12 | radiation | 1 | 1440 | > th | dose independent | rect. | 9 | 6 |
| 917 | 150.13 | temperature | 10 | 4320 | > th | dose dependent | rect. | 9 | 22 |
| 948 | 150.17 | temperature | 10 | 4320 | > th | dose dependent | sin | 4 | NA |
| 961 | 150.18 | temperature | 10 | 4320 | > th | dose dependent | rect. | 5 | 22 |
| 974 | 150.20 | humidity | 80 | 14400 | > th | dose independent | sin | 16 | NA |