Os03g0291800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF231, plant domain containing protein.
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Os03g0291800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF231, plant domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 99.53 | 0.469 | 9.72 | -3.23 | 2.14 | 0.0264 | 1.3 | -3.92 | -0.565 | 5.18 | 1011 | 18346 | -- | -- |
| 118.53 | 0.507 | 9.65 | -2.56 | 2.14 | -0.432 | 1.29 | -- | -0.423 | 5.17 | 1012 | 47520 | -- | -- |
| 103.61 | 0.474 | 9.71 | -3.2 | 2.15 | 0.038 | -- | -4.03 | -0.555 | 5.18 | 1010 | 18059 | -- | -- |
| 122.75 | 0.516 | 9.65 | -2.57 | 2.15 | -0.426 | -- | -- | -0.429 | 5.17 | 1012 | 47520 | -- | -- |
| 343.9 | 0.864 | 9.75 | -3.17 | -- | -0.00293 | -- | -3.75 | -0.52 | -- | 1010 | 18997 | -- | -- |
| 120.89 | 0.515 | 9.67 | -2.88 | 2.14 | -- | 1.28 | -- | -0.525 | 5.18 | -- | -- | -- | -- |
| 125.05 | 0.524 | 9.68 | -2.88 | 2.14 | -- | -- | -- | -0.531 | 5.17 | -- | -- | -- | -- |
| 355.23 | 0.878 | 9.72 | -2.64 | -- | -0.586 | -- | -- | -0.471 | -- | 999.3 | 11939 | -- | -- |
| 201.01 | 0.66 | 9.52 | -- | 2.14 | -2.28 | -- | -- | 0.173 | 5.17 | 1030 | 47520 | -- | -- |
| 365.7 | 0.894 | 9.7 | -2.8 | -- | -- | -- | -- | -0.477 | -- | -- | -- | -- | -- |
| 343.43 | 0.867 | 9.6 | -- | 2.09 | -- | -- | -- | -0.21 | 5.22 | -- | -- | -- | -- |
| 440.92 | 0.978 | 9.55 | -- | -- | -2.18 | -- | -- | 0.204 | -- | 1017 | 47520 | -- | -- |
| 572.94 | 1.12 | 9.63 | -- | -- | -- | -- | -- | -0.166 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 101.48 | humidity | 90 | 14400 | < th | dose independent | rect. | 23 | 8 |
| 8 | 102.16 | humidity | 90 | 14400 | < th | dose independent | rect. | 23 | 3 |
| 9 | 102.25 | humidity | 90 | 14400 | > th | dose independent | rect. | 23 | 8 |
| 11 | 102.37 | wind | 3 | 43200 | < th | dose independent | rect. | 14 | 2 |
| 13 | 102.39 | wind | 5 | 43200 | < th | dose dependent | rect. | 14 | 2 |
| 23 | 102.61 | wind | 3 | 43200 | > th | dose independent | rect. | 14 | 2 |
| 38 | 102.87 | humidity | 90 | 14400 | > th | dose independent | rect. | 23 | 4 |
| 42 | 102.93 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 68 | 103.30 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 69 | 103.32 | wind | 7 | 4320 | > th | dose dependent | rect. | 17 | 9 |
| 87 | 103.47 | wind | 7 | 4320 | > th | dose dependent | rect. | 17 | 6 |
| 89 | 103.48 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 5 | 18 |
| 94 | 103.50 | wind | 3 | 43200 | < th | dose independent | rect. | 13 | 8 |
| 95 | 103.50 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 7 | 16 |
| 98 | 103.50 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 15 | 20 |
| 104 | 103.52 | wind | 3 | 43200 | > th | dose independent | rect. | 13 | 8 |
| 110 | 103.52 | wind | 1 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 113 | 103.53 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 5 | 19 |
| 119 | 103.54 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 7 | 10 |
| 121 | 103.54 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 5 | 17 |
| 136 | 103.56 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 14 | 21 |
| 168 | 103.59 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 7 | 15 |
| 184 | 103.60 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 5 | 13 |
| 195 | 103.61 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 7 | 11 |
| 205 | 103.61 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 20 | 22 |
| 210 | 103.62 | atmosphere | 1005 | 14400 | < th | dose independent | sin | 0 | NA |
| 216 | 103.62 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 20 | 22 |
| 233 | 103.63 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 7 | 23 |
| 255 | 103.65 | atmosphere | 1005 | 14400 | > th | dose independent | sin | 0 | NA |
| 256 | 103.65 | atmosphere | 1005 | 14400 | < th | dose independent | no | NA | NA |
| 281 | 103.65 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 7 | 23 |
| 303 | 103.67 | atmosphere | 1005 | 14400 | > th | dose independent | no | NA | NA |
| 321 | 103.68 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 23 | 19 |
| 352 | 103.70 | wind | 7 | 4320 | > th | dose independent | rect. | 17 | 9 |
| 363 | 103.70 | wind | 9 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 421 | 103.75 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 8 | 5 |
| 451 | 103.77 | wind | 9 | 4320 | > th | dose independent | rect. | 18 | 4 |
| 452 | 103.77 | wind | 9 | 4320 | < th | dose independent | rect. | 18 | 5 |
| 509 | 103.83 | wind | 1 | 43200 | > th | dose independent | rect. | 8 | 9 |
| 595 | 103.92 | atmosphere | 1010 | 14400 | < th | dose dependent | rect. | 17 | 6 |
| 610 | 103.93 | atmosphere | 1010 | 14400 | < th | dose dependent | rect. | 19 | 4 |
| 624 | 103.94 | humidity | 80 | 14400 | > th | dose dependent | rect. | 24 | 1 |
| 625 | 103.94 | atmosphere | 1010 | 14400 | < th | dose dependent | rect. | 22 | 1 |
| 644 | 103.95 | atmosphere | 1010 | 14400 | < th | dose dependent | rect. | 19 | 2 |
| 658 | 103.96 | humidity | 80 | 14400 | > th | dose dependent | rect. | 23 | 3 |
| 719 | 104.00 | wind | 7 | 4320 | < th | dose independent | rect. | 17 | 9 |
| 721 | 104.00 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 14 | 13 |
| 822 | 104.06 | humidity | 90 | 14400 | > th | dose dependent | rect. | 4 | 3 |
| 830 | 104.07 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 4 | 7 |
| 835 | 104.07 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 14 | 11 |
| 858 | 104.09 | wind | 9 | 4320 | < th | dose independent | rect. | 17 | 7 |
| 859 | 104.09 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 14 | 9 |
| 869 | 104.09 | atmosphere | 1010 | 14400 | < th | dose dependent | sin | 14 | NA |
| 899 | 104.11 | wind | 1 | 43200 | > th | dose independent | rect. | 8 | 6 |
| 922 | 104.12 | humidity | 80 | 14400 | > th | dose dependent | rect. | 22 | 8 |
| 988 | 104.16 | humidity | 80 | 14400 | > th | dose dependent | rect. | 22 | 6 |