Os11g0107000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF231, plant domain containing protein.
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Os11g0107000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF231, plant domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 241.16 | 0.73 | 4.49 | 0.307 | 1.31 | -1.26 | -0.189 | -2.11 | -0.415 | 9.87 | 9.45 | 10 | -- | -- |
| 243.99 | 0.733 | 4.46 | 0.612 | 1.32 | -1.33 | -0.569 | -- | -0.333 | 9.88 | 9.45 | 10 | -- | -- |
| 240.83 | 0.728 | 4.5 | 0.274 | 1.31 | -1.27 | -- | -2.3 | -0.422 | 9.87 | 11.89 | 5 | -- | -- |
| 245.22 | 0.734 | 4.46 | 0.586 | 1.32 | -1.31 | -- | -- | -0.337 | 9.83 | 9.45 | 10 | -- | -- |
| 311.96 | 0.823 | 4.55 | -0.308 | -- | -0.811 | -- | -2.78 | -0.465 | -- | 19.22 | 603 | -- | -- |
| 260.85 | 0.757 | 4.5 | 0.35 | 1.22 | -- | -0.406 | -- | -0.518 | 8.8 | -- | -- | -- | -- |
| 261.39 | 0.757 | 4.5 | 0.336 | 1.22 | -- | -- | -- | -0.519 | 8.75 | -- | -- | -- | -- |
| 296.55 | 0.802 | 4.47 | 0.764 | -- | -1.78 | -- | -- | -0.244 | -- | 4.99 | 632 | -- | -- |
| 253.43 | 0.746 | 4.48 | -- | 1.29 | -1.03 | -- | -- | -0.435 | 9.58 | 9.45 | 10 | -- | -- |
| 345.82 | 0.869 | 4.53 | 0.338 | -- | -- | -- | -- | -0.509 | -- | -- | -- | -- | -- |
| 264.36 | 0.761 | 4.51 | -- | 1.22 | -- | -- | -- | -0.556 | 8.73 | -- | -- | -- | -- |
| 310.55 | 0.821 | 4.5 | -- | -- | -1.5 | -- | -- | -0.364 | -- | 10.82 | 619 | -- | -- |
| 348.83 | 0.872 | 4.54 | -- | -- | -- | -- | -- | -0.546 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 233.86 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 9 | 19 |
| 2 | 234.16 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 9 | 4 |
| 3 | 234.17 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 4 | 234.60 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 9 | 18 |
| 6 | 234.86 | wind | 3.0 | 1440 | < th | dose independent | rect. | 8 | 1 |
| 9 | 235.29 | wind | 5.0 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 12 | 235.62 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 13 | 235.75 | wind | 3.0 | 1440 | > th | dose independent | rect. | 8 | 1 |
| 16 | 235.91 | wind | 5.0 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 19 | 236.24 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 7 | 21 |
| 21 | 236.49 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 21 |
| 22 | 236.51 | temperature | 20.0 | 270 | > th | dose independent | rect. | 5 | 22 |
| 23 | 236.58 | wind | 1.0 | 1440 | > th | dose dependent | rect. | 8 | 1 |
| 25 | 236.69 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 22 | 1 |
| 30 | 237.02 | wind | 7.0 | 1440 | < th | dose dependent | rect. | 8 | 1 |
| 36 | 237.33 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 9 | 23 |
| 37 | 237.35 | wind | 3.0 | 1440 | < th | dose dependent | rect. | 2 | 1 |
| 43 | 237.47 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 5 |
| 49 | 237.55 | wind | 3.0 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 55 | 237.72 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 1 | 9 |
| 60 | 237.78 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 20 | 19 |
| 63 | 237.87 | wind | 5.0 | 4320 | > th | dose independent | rect. | 20 | 4 |
| 76 | 238.16 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 83 | 238.31 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 94 | 238.50 | temperature | 15.0 | 270 | > th | dose independent | rect. | 10 | 23 |
| 96 | 238.52 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 8 | 14 |
| 98 | 238.53 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 108 | 238.69 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 1 | 22 |
| 125 | 238.91 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 134 | 238.99 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 9 | 15 |
| 142 | 239.08 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 23 | 20 |
| 154 | 239.15 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 157 | 239.18 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 158 | 239.19 | temperature | 20.0 | 270 | < th | dose independent | rect. | 24 | 8 |
| 159 | 239.20 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 10 | 6 |
| 172 | 239.29 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 175 | 239.31 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 13 | 21 |
| 177 | 239.34 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 16 | 3 |
| 179 | 239.36 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 24 | 18 |
| 210 | 239.49 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 20 | 3 |
| 216 | 239.51 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 17 | 1 |
| 234 | 239.55 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 24 | 23 |
| 249 | 239.62 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 11 | 20 |
| 265 | 239.70 | wind | 5.0 | 1440 | < th | dose dependent | rect. | 7 | 4 |
| 271 | 239.75 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 272 | 239.75 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 17 | 1 |
| 273 | 239.75 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 15 | 2 |
| 324 | 239.87 | temperature | 15.0 | 270 | > th | dose independent | rect. | 12 | 15 |
| 325 | 239.87 | temperature | 15.0 | 90 | > th | dose independent | rect. | 12 | 17 |
| 326 | 239.87 | temperature | 25.0 | 270 | < th | dose independent | rect. | 11 | 20 |
| 331 | 239.89 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 5 | 23 |
| 416 | 240.00 | temperature | 20.0 | 30 | > th | dose dependent | sin | 4 | NA |
| 441 | 240.11 | wind | 9.0 | 1440 | < th | dose independent | rect. | 4 | 6 |
| 500 | 240.32 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 2 |
| 514 | 240.36 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 527 | 240.39 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 1 | 14 |
| 530 | 240.40 | wind | 3.0 | 1440 | < th | dose independent | rect. | 24 | 11 |
| 531 | 240.40 | temperature | 20.0 | 270 | > th | dose independent | rect. | 17 | 22 |
| 542 | 240.47 | wind | 3.0 | 1440 | > th | dose independent | rect. | 7 | 4 |
| 546 | 240.49 | wind | 3.0 | 1440 | < th | dose independent | rect. | 8 | 3 |
| 557 | 240.53 | wind | 3.0 | 1440 | > th | dose independent | rect. | 24 | 11 |
| 577 | 240.57 | wind | 1.0 | 1440 | > th | dose dependent | rect. | 7 | 4 |
| 590 | 240.61 | temperature | 15.0 | 270 | > th | dose independent | rect. | 11 | 20 |
| 607 | 240.66 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 20 | 23 |
| 612 | 240.68 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 624 | 240.73 | atmosphere | 1000.0 | 14400 | < th | dose independent | rect. | 4 | 1 |
| 633 | 240.77 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 7 |
| 656 | 240.87 | temperature | 25.0 | 10 | < th | dose independent | rect. | 1 | 9 |
| 682 | 240.95 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 715 | 241.07 | temperature | 25.0 | 720 | < th | dose dependent | sin | 21 | NA |
| 740 | 241.14 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 741 | 241.14 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 21 | 2 |
| 742 | 241.14 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 753 | 241.18 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 12 | 20 |
| 756 | 241.19 | temperature | 10.0 | 10 | > th | dose dependent | no | NA | NA |
| 778 | 241.25 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 800 | 241.33 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 3 | 1 |
| 814 | 241.36 | temperature | 15.0 | 720 | > th | dose independent | rect. | 9 | 10 |
| 816 | 241.36 | wind | 9.0 | 1440 | < th | dose dependent | rect. | 2 | 1 |
| 853 | 241.50 | atmosphere | 1000.0 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 871 | 241.55 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 8 | 8 |
| 873 | 241.55 | temperature | 15.0 | 10 | > th | dose independent | rect. | 13 | 15 |
| 915 | 241.66 | temperature | 15.0 | 720 | > th | dose independent | rect. | 7 | 14 |
| 925 | 241.67 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 7 | 17 |
| 940 | 241.71 | temperature | 20.0 | 270 | < th | dose independent | rect. | 24 | 22 |