Os05g0354400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF231, plant domain containing protein.
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Os05g0354400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF231, plant domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27.75 | 0.247 | 11.2 | 0.476 | 1.26 | 0.991 | -0.0999 | 0.344 | 0.0382 | 4.94 | 30.26 | 119 | -- | -- |
| 27.83 | 0.246 | 11.2 | 0.534 | 1.26 | 0.986 | 0.00585 | -- | 0.0532 | 4.92 | 30.26 | 129 | -- | -- |
| 27.73 | 0.245 | 11.2 | 0.475 | 1.26 | 0.975 | -- | 0.325 | 0.0408 | 4.93 | 29.95 | 132 | -- | -- |
| 27.83 | 0.246 | 11.2 | 0.533 | 1.25 | 0.988 | -- | -- | 0.0513 | 4.91 | 30.27 | 131 | -- | -- |
| 86.99 | 0.434 | 11.1 | 0.805 | -- | 2.24 | -- | 0.246 | 0.209 | -- | 32.93 | 191 | -- | -- |
| 40.38 | 0.298 | 11.2 | 0.293 | 1.55 | -- | 0.147 | -- | -0.132 | 4.59 | -- | -- | -- | -- |
| 40.43 | 0.298 | 11.2 | 0.292 | 1.55 | -- | -- | -- | -0.133 | 4.59 | -- | -- | -- | -- |
| 87.1 | 0.435 | 11.1 | 0.827 | -- | 2.22 | -- | -- | 0.238 | -- | 32.73 | 188 | -- | -- |
| 34.6 | 0.274 | 11.2 | -- | 1.33 | 0.861 | -- | -- | -0.0645 | 4.8 | 53.31 | 117 | -- | -- |
| 168.95 | 0.607 | 11.2 | 0.352 | -- | -- | -- | -- | -0.0918 | -- | -- | -- | -- | -- |
| 42.69 | 0.306 | 11.2 | -- | 1.56 | -- | -- | -- | -0.165 | 4.59 | -- | -- | -- | -- |
| 103.85 | 0.475 | 11.2 | -- | -- | 2.09 | -- | -- | 0.0975 | -- | 51.62 | 174 | -- | -- |
| 172.22 | 0.613 | 11.2 | -- | -- | -- | -- | -- | -0.131 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 23.69 | temperature | 15 | 270 | > th | dose dependent | rect. | 20 | 20 |
| 2 | 23.81 | temperature | 30 | 90 | < th | dose dependent | rect. | 4 | 19 |
| 4 | 23.96 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 21 |
| 5 | 24.02 | temperature | 10 | 270 | > th | dose dependent | rect. | 19 | 22 |
| 8 | 24.08 | temperature | 15 | 90 | > th | dose dependent | rect. | 21 | 22 |
| 16 | 24.40 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 17 |
| 20 | 24.57 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 21 |
| 28 | 24.91 | temperature | 10 | 270 | > th | dose dependent | rect. | 9 | 17 |
| 30 | 24.94 | temperature | 15 | 90 | > th | dose dependent | rect. | 9 | 19 |
| 91 | 26.22 | temperature | 15 | 10 | > th | dose dependent | rect. | 9 | 20 |
| 113 | 26.50 | temperature | 20 | 270 | > th | dose independent | rect. | 21 | 19 |
| 222 | 27.41 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 22 |
| 233 | 27.52 | temperature | 30 | 90 | < th | dose dependent | rect. | 16 | 19 |
| 243 | 27.61 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 10 |
| 249 | 27.63 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 255 | 27.65 | temperature | 30 | 270 | < th | dose dependent | rect. | 13 | 21 |
| 316 | 27.92 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 333 | 28.01 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 366 | 28.18 | temperature | 10 | 90 | > th | dose dependent | no | NA | NA |
| 410 | 28.33 | radiation | 30 | 270 | < th | dose dependent | rect. | 3 | 18 |
| 449 | 28.46 | temperature | 25 | 270 | < th | dose independent | rect. | 2 | 19 |
| 460 | 28.49 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 478 | 28.54 | temperature | 15 | 270 | > th | dose dependent | rect. | 21 | 6 |
| 490 | 28.57 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 501 | 28.60 | radiation | 30 | 270 | < th | dose dependent | rect. | 2 | 20 |
| 524 | 28.67 | temperature | 25 | 90 | < th | dose independent | rect. | 4 | 19 |
| 588 | 28.87 | temperature | 25 | 90 | < th | dose dependent | sin | 22 | NA |
| 627 | 28.98 | radiation | 30 | 270 | < th | dose dependent | rect. | 15 | 18 |
| 636 | 29.01 | temperature | 10 | 270 | > th | dose dependent | rect. | 20 | 8 |
| 690 | 29.20 | temperature | 20 | 270 | > th | dose independent | rect. | 6 | 22 |
| 708 | 29.25 | temperature | 20 | 270 | > th | dose independent | rect. | 9 | 17 |
| 740 | 29.34 | temperature | 20 | 270 | > th | dose independent | rect. | 21 | 6 |
| 759 | 29.38 | atmosphere | 995 | 90 | > th | dose dependent | rect. | 4 | 18 |
| 790 | 29.47 | atmosphere | 995 | 10 | > th | dose dependent | rect. | 5 | 17 |
| 798 | 29.49 | radiation | 20 | 270 | < th | dose independent | rect. | 3 | 18 |
| 889 | 29.65 | temperature | 15 | 90 | > th | dose dependent | rect. | 9 | 10 |
| 915 | 29.71 | temperature | 15 | 10 | > th | dose dependent | rect. | 22 | 7 |