BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0549100 Os10g0549100|AK100377
(233 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os10g0549100 Major sperm protein domain containing protein 483 e-137
Os02g0652550 Major sperm protein domain containing protein 219 1e-57
Os08g0155100 Major sperm protein domain containing protein 180 6e-46
Os02g0643000 Similar to VAP27 178 4e-45
Os08g0156700 Similar to VAP27 165 2e-41
Os04g0534400 Major sperm protein domain containing protein 156 1e-38
Os04g0554200 Major sperm protein domain containing protein 133 1e-31
Os10g0507600 Major sperm protein domain containing protein 132 3e-31
Os01g0936800 PapD-like domain containing protein 127 9e-30
Os05g0373000 Major sperm protein domain containing protein 121 4e-28
Os02g0661900 Similar to Vesicle-associated membrane protein... 103 1e-22
Os11g0274300 Protein kinase-like domain containing protein 92 3e-19
AK109135 72 3e-13
Os08g0141300 Major sperm protein domain containing protein 64 7e-11
>Os10g0549100 Major sperm protein domain containing protein
Length = 233
Score = 483 bits (1244), Expect = e-137, Method: Compositional matrix adjust.
Identities = 233/233 (100%), Positives = 233/233 (100%)
Query: 1 MGASGRLISIYPEDLTFLFELDKPCYCNLKVVNNSEHHVAFKVKTTSPRKYFVRPNASII 60
MGASGRLISIYPEDLTFLFELDKPCYCNLKVVNNSEHHVAFKVKTTSPRKYFVRPNASII
Sbjct: 1 MGASGRLISIYPEDLTFLFELDKPCYCNLKVVNNSEHHVAFKVKTTSPRKYFVRPNASII 60
Query: 61 QPWDSCTITITLQAQKEYPPDMQCKDKFLIQSTKVAASTDMDEIPPNTFNKEVDKVIEEM 120
QPWDSCTITITLQAQKEYPPDMQCKDKFLIQSTKVAASTDMDEIPPNTFNKEVDKVIEEM
Sbjct: 61 QPWDSCTITITLQAQKEYPPDMQCKDKFLIQSTKVAASTDMDEIPPNTFNKEVDKVIEEM 120
Query: 121 KLKVVYTVPSGSSDDSGITSLGSRSFKLGSDDLTMLKNASIEKIQTIQRLKDERDTTLQQ 180
KLKVVYTVPSGSSDDSGITSLGSRSFKLGSDDLTMLKNASIEKIQTIQRLKDERDTTLQQ
Sbjct: 121 KLKVVYTVPSGSSDDSGITSLGSRSFKLGSDDLTMLKNASIEKIQTIQRLKDERDTTLQQ 180
Query: 181 NQQMQRELDVIRRRRSRKSDAGFSLTFAAFAGLIGVLIGLLMSLIFPRPQAAA 233
NQQMQRELDVIRRRRSRKSDAGFSLTFAAFAGLIGVLIGLLMSLIFPRPQAAA
Sbjct: 181 NQQMQRELDVIRRRRSRKSDAGFSLTFAAFAGLIGVLIGLLMSLIFPRPQAAA 233
>Os02g0652550 Major sperm protein domain containing protein
Length = 120
Score = 219 bits (558), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 100/108 (92%), Positives = 104/108 (96%)
Query: 1 MGASGRLISIYPEDLTFLFELDKPCYCNLKVVNNSEHHVAFKVKTTSPRKYFVRPNASII 60
MG G LISIYPEDLTFLFELDKPCYCNLKVVNNSEHHVAFKVKTTSPRKYFVRPNA+I+
Sbjct: 1 MGGGGTLISIYPEDLTFLFELDKPCYCNLKVVNNSEHHVAFKVKTTSPRKYFVRPNANIV 60
Query: 61 QPWDSCTITITLQAQKEYPPDMQCKDKFLIQSTKVAASTDMDEIPPNT 108
QPWDSCTITITLQAQKEYP DMQCKDKFLIQST+VAASTDMDEIPP+T
Sbjct: 61 QPWDSCTITITLQAQKEYPQDMQCKDKFLIQSTRVAASTDMDEIPPDT 108
>Os08g0155100 Major sperm protein domain containing protein
Length = 237
Score = 180 bits (457), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 96/235 (40%), Positives = 140/235 (59%), Gaps = 18/235 (7%)
Query: 4 SGRLISIYPEDLTFLFELDKPCYCNLKVVNNSEHHVAFKVKTTSPRKYFVRPNASIIQPW 63
S + I P +L+F FEL K C++++ N ++H+VAFKVKTT+P++Y VRPN ++ P
Sbjct: 2 SASFLEIQPSELSFPFELLKQSSCSMQLTNKTDHYVAFKVKTTNPKQYCVRPNIGVVLPG 61
Query: 64 DSCTITITLQAQKEYPPDMQCKDKFLIQSTKVAASTDMDEIPPNTFNKEVDKVIEEMKLK 123
+C +T+T+QAQ+E PPDMQCKDKFL+QS +I FNK KV+EE KL+
Sbjct: 62 STCDVTVTMQAQREAPPDMQCKDKFLVQSVAAENGATTQDISAEMFNKVAGKVVEEFKLR 121
Query: 124 VVY---TVPSGSSDDSGITSLGSRSF--KLGSDDLTM-----------LKNASIEKIQTI 167
VVY T S +DS S +R F + G + TM K E I
Sbjct: 122 VVYVPTTTSSAMPEDSEQGS-SARPFAQENGIHNSTMPQPVFRSSAEPTKERPTEPSSMI 180
Query: 168 QRLKDERDTTLQQNQQMQRELDVIRRRRSRKSDAGFSLTFAAFAGLIGVLIGLLM 222
+L +E +QQNQ+++ EL+++ R+ S KS GFSLTF A GL+G+++G ++
Sbjct: 181 SKLNEENRVAIQQNQKLRHELELL-RKESSKSSGGFSLTFLAIVGLLGIIVGYIL 234
>Os02g0643000 Similar to VAP27
Length = 259
Score = 178 bits (451), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 91/220 (41%), Positives = 136/220 (61%), Gaps = 2/220 (0%)
Query: 4 SGRLISIYPEDLTFLFELDKPCYCNLKVVNNSEHHVAFKVKTTSPRKYFVRPNASIIQPW 63
S L+ I P +L F FEL K C+L + N ++ +V FKVKTTSP+KY VRPN I+ P
Sbjct: 39 SRELLGIDPPELIFPFELKKQISCSLHLTNKTDEYVTFKVKTTSPKKYCVRPNNGIVAPQ 98
Query: 64 DSCTITITLQAQKEYPPDMQCKDKFLIQSTKVAASTDMDEIPPNTFNKEVDKVIEEMKLK 123
+ + +T+QAQ+E PPDMQCKDKFL+QS V +I + F KE V++E+KLK
Sbjct: 99 STSNVLVTMQAQREAPPDMQCKDKFLVQSAIVTQELTPKDITGDMFTKESGNVVDEVKLK 158
Query: 124 VVYTVPSGSSDDSGI-TSLGSRSFKLGSDDLTMLKNASIEKIQTIQRLKDERDTTLQQNQ 182
VVYT P +S + G LGS S++ + + + E + I +LK+E+ + +QQN
Sbjct: 159 VVYTQPHPTSLNGGSEEGLGSLSYQEATKGSRESETVTSEPLALISKLKEEKSSAIQQNM 218
Query: 183 QMQRELDVIRRRRSRKSDAGFSLTFAAFAGLIGVLIGLLM 222
+++ ELD++RR+ + GFSL F ++G+L+G L+
Sbjct: 219 KLREELDLLRRQMGSQ-HGGFSLVFVLVIAILGILLGFLI 257
>Os08g0156700 Similar to VAP27
Length = 243
Score = 165 bits (418), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/235 (37%), Positives = 133/235 (56%), Gaps = 18/235 (7%)
Query: 4 SGRLISIYPEDLTFLFELDKPCYCNLKVVNNSEHHVAFKVKTTSPRKYFVRPNASIIQPW 63
+G L+ I P +L F FEL K C++++ N S+ ++AFKVKTTSP+KY VRPN ++ P
Sbjct: 9 AGELLRIDPVELRFPFELKKQISCSMQLSNLSDDYIAFKVKTTSPKKYSVRPNTGVVLPR 68
Query: 64 DSCTITITLQAQKEYPPDMQCKDKFLIQSTKVAASTDMDEIPPNTFNKEVDKVIEEMKLK 123
+C + +T+QAQ+E PPDMQCKDKFL+QS + + +I F KE +EE+KL+
Sbjct: 69 STCDVVVTMQAQREAPPDMQCKDKFLVQSVIAPSGVTVKDITGEMFTKESGNKVEEVKLR 128
Query: 124 VVYTV----------------PSGSSDDSGITSLGSRSFKLGSDDLTMLKNASIEKIQTI 167
V Y PS S+ SLG F + + S+E I
Sbjct: 129 VTYIAPPQPPSPVPEESEEGSPSRVSESENGDSLGG-GFTRALRERIEPQENSLEAGALI 187
Query: 168 QRLKDERDTTLQQNQQMQRELDVIRRRRSRKSDAGFSLTFAAFAGLIGVLIGLLM 222
+L +E+++ +QQN ++++ELD++RR S+K GFS LIG+ +G +M
Sbjct: 188 NKLNEEKNSAIQQNHKIRQELDMMRREISKKR-GGFSFIIVIIVALIGIFLGYMM 241
>Os04g0534400 Major sperm protein domain containing protein
Length = 250
Score = 156 bits (394), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 91/249 (36%), Positives = 139/249 (55%), Gaps = 28/249 (11%)
Query: 1 MGA-SGRLISIYPEDLTFLFELDKPCYCNLKVVNNSEHHVAFKVKTTSPRKYFVRPNASI 59
MG+ S L+ I P +L F FE K C++++ N ++ ++AFKVKTTSP+KY VRPN+ I
Sbjct: 1 MGSDSKELLGIEPLELRFSFETKKQISCSMQLTNRTDDYIAFKVKTTSPKKYCVRPNSGI 60
Query: 60 IQPWDSCTITITLQAQKEYPPDMQCKDKFLIQSTKVAASTDMDEIPPNTFNKEVDKVIEE 119
+ P + + +T+QAQ+E P DMQCKDKFL+QS V T ++ FNK V++E
Sbjct: 61 VPPRSTSDVIVTMQAQREAPADMQCKDKFLVQSVVVTEGTTTKDVTGEMFNKGSGNVVDE 120
Query: 120 MKLKVVYTVP------------SGSSDDSGITSLGSRSFK---LGSDDLTMLK------- 157
KLKVVY P GSS + ++ G+ +++ SD+ +L
Sbjct: 121 RKLKVVYVQPPRPPSPVREGSEEGSSPRASLSEGGNLNYQDTTRESDEPPLLSATRAHKD 180
Query: 158 ----NASIEKIQTIQRLKDERDTTLQQNQQMQRELDVIRRRRSRKSDAGFSLTFAAFAGL 213
+ E I RL +ER++ +QQN ++ E+D++RR S K + GF F L
Sbjct: 181 AEDVTSDSETSALISRLTEERNSAIQQNNKLLEEMDLVRREIS-KQNGGFPFVFVVVVAL 239
Query: 214 IGVLIGLLM 222
+G+L+G +M
Sbjct: 240 LGILLGYIM 248
>Os04g0554200 Major sperm protein domain containing protein
Length = 244
Score = 133 bits (334), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/243 (34%), Positives = 122/243 (50%), Gaps = 23/243 (9%)
Query: 4 SGRLISIYPEDLTFLFELDKPCYCNLKVVNNSEHHVAFKVKTTSPRKYFVRPNASIIQPW 63
S L+ ++P +L +E + C +++ N + +VAFKVKTT+PRKY VR I+ P
Sbjct: 2 SNTLLRVHPSELKIPYEYKRKRSCCMQLTNKTNQYVAFKVKTTNPRKYSVRHACGILPPR 61
Query: 64 DSCTITITLQAQKEYPPDMQCKDKFLIQSTKVAASTDMDEIPPNTFNKEVDKVIEEMKLK 123
SC IT+T+QA E D CKDKFL+QS V M + P F K +VIEE KL+
Sbjct: 62 SSCDITVTMQAPVEMLSDYHCKDKFLVQSVAVGYGATMRDFVPELFTKAPGRVIEEFKLR 121
Query: 124 VVYTVPSGSS-----------DDSGITSLGSRSFKLGS----------DDLTMLKNASIE 162
VVY + S D S + + S K+ S D + K +S E
Sbjct: 122 VVYVAANPPSPVPEEEEEEEEDASPQSEVMSHGVKMTSVFDAVTVSTLTDRSADKVSSAE 181
Query: 163 KIQTIQRLKDERDTTLQQNQQMQRELDVIRRRRSRKSDAGFSLTFAAFAGLIGVLIGLLM 222
+ L ER+ +++NQ++Q++++++R RS S GFS F + V IG M
Sbjct: 182 GVSVESMLVAEREYPVEENQKLQQQMELLRAARS--SQQGFSAMFVLLVFMSSVCIGHFM 239
Query: 223 SLI 225
I
Sbjct: 240 KQI 242
>Os10g0507600 Major sperm protein domain containing protein
Length = 240
Score = 132 bits (331), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 123/242 (50%), Gaps = 56/242 (23%)
Query: 1 MGASGRLISIYPEDLTFLFELDKPCYCNLKVVNNSEHHVAFKVKTTSPRKYFVRPNASII 60
M AS L+ + P +L F FELDK C L++ N +E VAFKVKTTSP+KY VRPN ++
Sbjct: 1 MAASCDLVDVDPPELQFPFELDKQISCPLRIANKTERTVAFKVKTTSPKKYCVRPNNGVV 60
Query: 61 QPWDSCTITITLQAQKEYPPDMQCKDKFLIQSTKVAASTDMDEIPPNTFNKEVDKVIEEM 120
+P + + +T+QAQ PPD+QCKDKFL+QS V +I F ++ + ++EE+
Sbjct: 61 RPRSASVVVVTMQAQIVAPPDLQCKDKFLVQSVVVDDGLSAKDITSQMFLRDENNMVEEV 120
Query: 121 KLKVVYTVP-----------------------------SGSSDDSGITSLGSRSFKLGSD 151
KLKV Y +P SGS SG SL RS ++G++
Sbjct: 121 KLKVSYVMPPEPAMEIAEESDIPKRILVPMQRILDNGRSGSELSSGNVSL--RSAEMGTE 178
Query: 152 ----------DLTMLKNAS---------------IEKIQTIQRLKDERDTTLQQNQQMQR 186
+ MLK AS +E + +L +E+ + L+QN++++
Sbjct: 179 LGSPLGRFVRNEDMLKTASPVVETRVHAGPDEQYLELSALVAKLTEEKKSALEQNRKLRE 238
Query: 187 EL 188
EL
Sbjct: 239 EL 240
>Os01g0936800 PapD-like domain containing protein
Length = 380
Score = 127 bits (318), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 64/135 (47%), Positives = 88/135 (65%), Gaps = 3/135 (2%)
Query: 7 LISIYPEDLTFLFELDKPCYCNLKVVNNSEHHVAFKVKTTSPRKYFVRPNASIIQPWDSC 66
L I+P +L F FE+ K C + +VN S +VAFKVKTTSP++Y VRPN +I P +C
Sbjct: 5 LAEIHPRELQFTFEVKKQSSCTVHLVNKSNEYVAFKVKTTSPKRYCVRPNTGVILPRSTC 64
Query: 67 TITITLQAQKEYPPDMQCKDKFLIQSTKVAASTDMDEIPPNTFNKEVDKVIEEMKLKVVY 126
T+T+QAQ+ PPDMQ KDKFL+Q+T V T +++ P+ F+KE + IEE KL+VV
Sbjct: 65 DFTVTMQAQRTAPPDMQLKDKFLVQTTVVPYGTSDEDLVPSYFSKESGRYIEESKLRVVL 124
Query: 127 ---TVPSGSSDDSGI 138
+ P G +GI
Sbjct: 125 VSASHPFGEQPINGI 139
>Os05g0373000 Major sperm protein domain containing protein
Length = 477
Score = 121 bits (304), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 59/119 (49%), Positives = 82/119 (68%)
Query: 7 LISIYPEDLTFLFELDKPCYCNLKVVNNSEHHVAFKVKTTSPRKYFVRPNASIIQPWDSC 66
L+ I+P ++ F FE+ K C + +VN SE +VAFKVKTTSP++Y VRPN +I P +C
Sbjct: 8 LVEIHPGEIRFEFEVKKKSSCYVCLVNKSEEYVAFKVKTTSPKRYCVRPNVGVILPRATC 67
Query: 67 TITITLQAQKEYPPDMQCKDKFLIQSTKVAASTDMDEIPPNTFNKEVDKVIEEMKLKVV 125
T+ +QAQ PPD+Q +DKFL+Q+T V T ++I P F+KEV + IEE KL+VV
Sbjct: 68 VFTVIMQAQMIAPPDLQIRDKFLVQTTVVPFGTADEDIAPAFFSKEVGRYIEENKLRVV 126
>Os02g0661900 Similar to Vesicle-associated membrane protein-associated protein
B/C (VAMP- associated protein B/C) (VAMP-B/VAMP-C)
(VAP-B/VAP-C). Splice isoform 2
Length = 106
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 64/101 (63%)
Query: 4 SGRLISIYPEDLTFLFELDKPCYCNLKVVNNSEHHVAFKVKTTSPRKYFVRPNASIIQPW 63
S L+ IYP +L FEL + L++ N ++HHVAFKVKTT+PRKY VRP I+ P
Sbjct: 2 SNTLLRIYPSELKIPFELKRQNSGILELTNKTDHHVAFKVKTTNPRKYSVRPTTGIVLPR 61
Query: 64 DSCTITITLQAQKEYPPDMQCKDKFLIQSTKVAASTDMDEI 104
SC ITI++Q KE P D CKDKFLIQS V T +I
Sbjct: 62 GSCGITISMQPPKEIPTDYNCKDKFLIQSVVVEDGTTQKDI 102
>Os11g0274300 Protein kinase-like domain containing protein
Length = 693
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 70/115 (60%), Gaps = 3/115 (2%)
Query: 14 DLTFLFELDKPCYCNLKVVNNSEHHVAFKVKTTSPRKYFVRPNASIIQPWDSCTITITLQ 73
+L F FE+ K C L++ N +++ +AF K +KY +PN I PW SC +T+T++
Sbjct: 572 ELRFPFEVKKDISCCLQLTNQTDYFIAFNTKANQ-KKYSTQPNKGTIAPWSSCYVTVTMK 630
Query: 74 AQKEYPPDMQCKDKFLIQSTKVAA--STDMDEIPPNTFNKEVDKVIEEMKLKVVY 126
AQ+ PP +QC D F++QST+V + ++I F K + KV++E KL +VY
Sbjct: 631 AQETAPPYLQCHDMFVVQSTRVNEDLEPETEDITEELFKKTMGKVVDEEKLPIVY 685
>AK109135
Length = 294
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 55/94 (58%)
Query: 6 RLISIYPEDLTFLFELDKPCYCNLKVVNNSEHHVAFKVKTTSPRKYFVRPNASIIQPWDS 65
+ + I P DL FL KP ++K+ N S +++KVKTT+P++Y V+PN I P +S
Sbjct: 4 KALKISPADLVFLPPFTKPINNSIKLTNTSTEALSYKVKTTAPKRYCVKPNTGTISPNES 63
Query: 66 CTITITLQAQKEYPPDMQCKDKFLIQSTKVAAST 99
+TITL K+ P + + DKF IQ V +T
Sbjct: 64 VEVTITLNFTKDPPANPKVADKFQIQCIPVTDTT 97
>Os08g0141300 Major sperm protein domain containing protein
Length = 233
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 61/119 (51%), Gaps = 7/119 (5%)
Query: 12 PEDLTFLFELDKPCYCNLKVVNNSEHHVAFKVKTTSPRKYFVRPNASIIQPWDSCTIT-- 69
P L F +E K +K+ N S+ HVAFK +TT+P+ F+RP I+ P +S T
Sbjct: 51 PSKLFFPYEPGKQVRSAVKIKNISKSHVAFKFQTTAPKSCFMRPPGGILAPGESIIATVF 110
Query: 70 --ITLQAQKEYPPDMQCKDKFLIQSTKVAASTDMDEIPPNTFNKEVDKVIEEMKLKVVY 126
+ E P D +CK KF I S KV E P F+++ ++V E L+VV+
Sbjct: 111 KFVEHPENNEKPLDQKCKVKFKIVSLKVKGPM---EYVPELFDEQKNQVAVEQILRVVF 166
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.133 0.378
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 7,556,331
Number of extensions: 287209
Number of successful extensions: 849
Number of sequences better than 1.0e-10: 15
Number of HSP's gapped: 843
Number of HSP's successfully gapped: 15
Length of query: 233
Length of database: 17,035,801
Length adjustment: 98
Effective length of query: 135
Effective length of database: 11,918,829
Effective search space: 1609041915
Effective search space used: 1609041915
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 154 (63.9 bits)