BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0340600 Os10g0340600|J090076M05
(143 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os10g0340600 Glycoside hydrolase, family 35 protein 249 4e-67
Os06g0628500 209 6e-55
Os01g0533400 Glycoside hydrolase, family 35 protein 207 2e-54
Os10g0330600 Glycoside hydrolase, family 35 protein 206 5e-54
Os03g0165400 Similar to Relative to SR12 protein (Fragment) 166 5e-42
Os08g0549200 Glycoside hydrolase, family 35 protein 164 2e-41
Os06g0573600 Similar to Beta-galactosidase precursor (EC 3.... 162 8e-41
Os01g0580200 Similar to Beta-galactosidase precursor (EC 3.... 159 6e-40
Os03g0255100 Similar to Relative to SR12 protein (Fragment) 157 2e-39
Os05g0428100 Glycoside hydrolase, family 35 protein 144 2e-35
Os09g0539200 Similar to Relative to SR12 protein (Fragment) 143 4e-35
Os01g0875500 Similar to Beta-galactosidase (EC 3.2.1.23) 142 6e-35
Os12g0429200 Similar to Relative to SR12 protein (Fragment) 138 2e-33
Os05g0539400 Glycoside hydrolase, family 35 protein 89 7e-19
>Os10g0340600 Glycoside hydrolase, family 35 protein
Length = 143
Score = 249 bits (637), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 123/143 (86%), Positives = 123/143 (86%)
Query: 1 MAKAMCSXXXXXXXXXXXXXXXXXXXXCSIVSYDGRSLILDGERRIVISGSIHYPRSTPE 60
MAKAMCS CSIVSYDGRSLILDGERRIVISGSIHYPRSTPE
Sbjct: 1 MAKAMCSLGACLAVMLVVLAAAVAGVGCSIVSYDGRSLILDGERRIVISGSIHYPRSTPE 60
Query: 61 MWPDLIKKAKEGGLNAIETYVFWNGHEPRRREFNFEGNYDVVRFFKEIQNAGMYAILRIG 120
MWPDLIKKAKEGGLNAIETYVFWNGHEPRRREFNFEGNYDVVRFFKEIQNAGMYAILRIG
Sbjct: 61 MWPDLIKKAKEGGLNAIETYVFWNGHEPRRREFNFEGNYDVVRFFKEIQNAGMYAILRIG 120
Query: 121 PYICGEWNYGYMPMLYLDTIVCL 143
PYICGEWNYGYMPMLYLDTIVCL
Sbjct: 121 PYICGEWNYGYMPMLYLDTIVCL 143
>Os06g0628500
Length = 809
Score = 209 bits (531), Expect = 6e-55, Method: Composition-based stats.
Identities = 88/105 (83%), Positives = 100/105 (95%)
Query: 29 SIVSYDGRSLILDGERRIVISGSIHYPRSTPEMWPDLIKKAKEGGLNAIETYVFWNGHEP 88
+ V+Y+ RSL++DGERRI+ISGSIHYPRSTPEMWPDLIKKAKEGGL+AIETYVFWNGHEP
Sbjct: 29 TTVTYNDRSLVIDGERRIIISGSIHYPRSTPEMWPDLIKKAKEGGLDAIETYVFWNGHEP 88
Query: 89 RRREFNFEGNYDVVRFFKEIQNAGMYAILRIGPYICGEWNYGYMP 133
RR++NF GNYD+VRFFKEIQNAG+YAILRIGPYICGEWNYG +P
Sbjct: 89 HRRQYNFVGNYDIVRFFKEIQNAGLYAILRIGPYICGEWNYGGLP 133
>Os01g0533400 Glycoside hydrolase, family 35 protein
Length = 827
Score = 207 bits (526), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 92/111 (82%), Positives = 103/111 (92%)
Query: 28 CSIVSYDGRSLILDGERRIVISGSIHYPRSTPEMWPDLIKKAKEGGLNAIETYVFWNGHE 87
C+ VSYD RSL++DG+RRI++SGSIHYPRSTPEMWPDLIKKAKEGGL+AIETY+FWNGHE
Sbjct: 28 CTSVSYDDRSLVIDGQRRIILSGSIHYPRSTPEMWPDLIKKAKEGGLDAIETYIFWNGHE 87
Query: 88 PRRREFNFEGNYDVVRFFKEIQNAGMYAILRIGPYICGEWNYGYMPMLYLD 138
P RR++NFEGNYDVVRFFKEIQNAGMYAILRIGPYICGEWNYG +P D
Sbjct: 88 PHRRQYNFEGNYDVVRFFKEIQNAGMYAILRIGPYICGEWNYGGLPAWLRD 138
>Os10g0330600 Glycoside hydrolase, family 35 protein
Length = 828
Score = 206 bits (524), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 90/111 (81%), Positives = 103/111 (92%)
Query: 28 CSIVSYDGRSLILDGERRIVISGSIHYPRSTPEMWPDLIKKAKEGGLNAIETYVFWNGHE 87
C+ V+Y+ RSL++DGERRI+ISGSIHYPRSTPEMWPDLIKKAKEGGL+AIETYVFWNGHE
Sbjct: 28 CTTVAYNDRSLVIDGERRIIISGSIHYPRSTPEMWPDLIKKAKEGGLDAIETYVFWNGHE 87
Query: 88 PRRREFNFEGNYDVVRFFKEIQNAGMYAILRIGPYICGEWNYGYMPMLYLD 138
P RR++NFEGNYD++RFFKEIQNAG+YAILRIGPYICGEWNYG +P D
Sbjct: 88 PHRRQYNFEGNYDIIRFFKEIQNAGLYAILRIGPYICGEWNYGGLPAWLRD 138
>Os03g0165400 Similar to Relative to SR12 protein (Fragment)
Length = 841
Score = 166 bits (420), Expect = 5e-42, Method: Composition-based stats.
Identities = 69/104 (66%), Positives = 87/104 (83%)
Query: 31 VSYDGRSLILDGERRIVISGSIHYPRSTPEMWPDLIKKAKEGGLNAIETYVFWNGHEPRR 90
V+YD +++++DG+RRI+ SGSIHYPRSTPEMW LI+KAK+GGL+ I+TYVFWNGHEP
Sbjct: 27 VTYDKKAVLVDGQRRILFSGSIHYPRSTPEMWDGLIEKAKDGGLDVIQTYVFWNGHEPTP 86
Query: 91 REFNFEGNYDVVRFFKEIQNAGMYAILRIGPYICGEWNYGYMPM 134
+NFEG YD+VRF K +Q AGM+ LRIGPYICGEWN+G P+
Sbjct: 87 GNYNFEGRYDLVRFIKTVQKAGMFVHLRIGPYICGEWNFGGFPV 130
>Os08g0549200 Glycoside hydrolase, family 35 protein
Length = 848
Score = 164 bits (415), Expect = 2e-41, Method: Composition-based stats.
Identities = 68/105 (64%), Positives = 85/105 (80%)
Query: 29 SIVSYDGRSLILDGERRIVISGSIHYPRSTPEMWPDLIKKAKEGGLNAIETYVFWNGHEP 88
++++YD RSLI+DG R I SGSIHYPRS P+ WPDLI KAKEGGLN IE+YVFWNGHEP
Sbjct: 31 TVITYDRRSLIIDGHREIFFSGSIHYPRSPPDTWPDLISKAKEGGLNVIESYVFWNGHEP 90
Query: 89 RRREFNFEGNYDVVRFFKEIQNAGMYAILRIGPYICGEWNYGYMP 133
+ +NFEG YD+++FFK IQ MYAI+RIGP++ EWN+G +P
Sbjct: 91 EQGVYNFEGRYDLIKFFKLIQEKEMYAIVRIGPFVQAEWNHGGLP 135
>Os06g0573600 Similar to Beta-galactosidase precursor (EC 3.2.1.23) (Lactase)
Length = 715
Score = 162 bits (410), Expect = 8e-41, Method: Composition-based stats.
Identities = 68/103 (66%), Positives = 86/103 (83%)
Query: 32 SYDGRSLILDGERRIVISGSIHYPRSTPEMWPDLIKKAKEGGLNAIETYVFWNGHEPRRR 91
+YD RSL ++G+RRI+ISGSIHYPRSTPEMWPDLI+KAK+GGL+ I+TYVFWNGHEP +
Sbjct: 23 TYDHRSLTINGQRRILISGSIHYPRSTPEMWPDLIQKAKDGGLDVIQTYVFWNGHEPVQG 82
Query: 92 EFNFEGNYDVVRFFKEIQNAGMYAILRIGPYICGEWNYGYMPM 134
++ F YD+VRF K ++ AG+Y LRIGPY+C EWNYG P+
Sbjct: 83 QYYFSDRYDLVRFVKLVKQAGLYVNLRIGPYVCAEWNYGGFPV 125
>Os01g0580200 Similar to Beta-galactosidase precursor (EC 3.2.1.23) (Lactase)
Length = 827
Score = 159 bits (402), Expect = 6e-40, Method: Composition-based stats.
Identities = 64/103 (62%), Positives = 87/103 (84%)
Query: 32 SYDGRSLILDGERRIVISGSIHYPRSTPEMWPDLIKKAKEGGLNAIETYVFWNGHEPRRR 91
+YD ++++++G+RRI+ISGSIHYPRSTPEMWPDLI+KAK+GGL+ ++TYVFWNGHEP
Sbjct: 27 TYDRKAVVVNGQRRILISGSIHYPRSTPEMWPDLIEKAKDGGLDVVQTYVFWNGHEPSPG 86
Query: 92 EFNFEGNYDVVRFFKEIQNAGMYAILRIGPYICGEWNYGYMPM 134
++ FEG YD+V F K ++ AG+Y LRIGPY+C EWN+G P+
Sbjct: 87 QYYFEGRYDLVHFIKLVKQAGLYVNLRIGPYVCAEWNFGGFPV 129
>Os03g0255100 Similar to Relative to SR12 protein (Fragment)
Length = 956
Score = 157 bits (398), Expect = 2e-39, Method: Composition-based stats.
Identities = 63/104 (60%), Positives = 86/104 (82%)
Query: 31 VSYDGRSLILDGERRIVISGSIHYPRSTPEMWPDLIKKAKEGGLNAIETYVFWNGHEPRR 90
V+YD R++++DG RR+++SGSIHYPRSTP+MWP LI+K+K+GGL+ IETYVFW+ HE R
Sbjct: 131 VTYDHRAVVIDGVRRVLVSGSIHYPRSTPDMWPGLIQKSKDGGLDVIETYVFWDIHEAVR 190
Query: 91 REFNFEGNYDVVRFFKEIQNAGMYAILRIGPYICGEWNYGYMPM 134
+++FEG D+VRF K + +AG+Y LRIGPY+C EWNYG P+
Sbjct: 191 GQYDFEGRKDLVRFVKAVADAGLYVHLRIGPYVCAEWNYGGFPV 234
>Os05g0428100 Glycoside hydrolase, family 35 protein
Length = 775
Score = 144 bits (363), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 80/108 (74%)
Query: 31 VSYDGRSLILDGERRIVISGSIHYPRSTPEMWPDLIKKAKEGGLNAIETYVFWNGHEPRR 90
++YDGR+L++ G RR+ SG +HY RSTPEMWP LI KAK GGL+ I+TYVFWN HEP +
Sbjct: 29 ITYDGRALVVSGARRMFFSGDMHYARSTPEMWPKLIAKAKNGGLDVIQTYVFWNVHEPIQ 88
Query: 91 REFNFEGNYDVVRFFKEIQNAGMYAILRIGPYICGEWNYGYMPMLYLD 138
++NFEG YD+V+F +EIQ G+Y LRIGP++ EW YG P D
Sbjct: 89 GQYNFEGRYDLVKFIREIQAQGLYVSLRIGPFVEAEWKYGGFPFWLHD 136
>Os09g0539200 Similar to Relative to SR12 protein (Fragment)
Length = 446
Score = 143 bits (360), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 63/105 (60%), Positives = 82/105 (78%)
Query: 29 SIVSYDGRSLILDGERRIVISGSIHYPRSTPEMWPDLIKKAKEGGLNAIETYVFWNGHEP 88
++VSYD RSL++DG+R + SG+IHYPRS PEMW L+K AK GGLN IETYVFWNGHEP
Sbjct: 34 TVVSYDERSLMIDGKRDLFFSGAIHYPRSPPEMWDKLVKTAKMGGLNTIETYVFWNGHEP 93
Query: 89 RRREFNFEGNYDVVRFFKEIQNAGMYAILRIGPYICGEWNYGYMP 133
++ FEG +D++RF I++ MYAI+RIGP+I EWN+G +P
Sbjct: 94 EPGKYYFEGRFDLIRFLNVIKDNDMYAIVRIGPFIQAEWNHGGLP 138
>Os01g0875500 Similar to Beta-galactosidase (EC 3.2.1.23)
Length = 851
Score = 142 bits (359), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 61/106 (57%), Positives = 84/106 (79%)
Query: 29 SIVSYDGRSLILDGERRIVISGSIHYPRSTPEMWPDLIKKAKEGGLNAIETYVFWNGHEP 88
S V+YD RSLI+ G RR++IS SIHYPRS PEMWP L+ +AK+GG + +ETYVFWNGHEP
Sbjct: 36 SSVTYDHRSLIISGRRRLLISTSIHYPRSVPEMWPKLVAEAKDGGADCVETYVFWNGHEP 95
Query: 89 RRREFNFEGNYDVVRFFKEIQNAGMYAILRIGPYICGEWNYGYMPM 134
+ ++ FE +D+VRF K +++AG+Y ILRIGP++ EW +G +P+
Sbjct: 96 AQGQYYFEERFDLVRFAKIVKDAGLYMILRIGPFVAAEWTFGGVPV 141
>Os12g0429200 Similar to Relative to SR12 protein (Fragment)
Length = 919
Score = 138 bits (347), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 57/108 (52%), Positives = 80/108 (74%)
Query: 31 VSYDGRSLILDGERRIVISGSIHYPRSTPEMWPDLIKKAKEGGLNAIETYVFWNGHEPRR 90
V+YD R++++ G+RR+++S +HYPR+TPEMWP LI K KEGG + IETYVFWNGHEP +
Sbjct: 64 VTYDHRAVLIGGKRRMLVSAGLHYPRATPEMWPSLIAKCKEGGADVIETYVFWNGHEPAK 123
Query: 91 REFNFEGNYDVVRFFKEIQNAGMYAILRIGPYICGEWNYGYMPMLYLD 138
++ FE +D+V+F K + G++ LRIGPY C EWN+G P+ D
Sbjct: 124 GQYYFEERFDLVKFAKLVAAEGLFLFLRIGPYACAEWNFGGFPVWLRD 171
>Os05g0539400 Glycoside hydrolase, family 35 protein
Length = 673
Score = 89.4 bits (220), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 55/93 (59%)
Query: 41 DGERRIVISGSIHYPRSTPEMWPDLIKKAKEGGLNAIETYVFWNGHEPRRREFNFEGNYD 100
DG ++ G +HY R PE W D + +AK GLN I+TYV WN HEP+ + F+G D
Sbjct: 44 DGAPFQIVGGDVHYFRIVPEYWKDRLLRAKALGLNTIQTYVPWNLHEPKPLSWEFKGFTD 103
Query: 101 VVRFFKEIQNAGMYAILRIGPYICGEWNYGYMP 133
+ + + M +LR+GPYICGEW+ G P
Sbjct: 104 IESYLRLAHELDMLVMLRVGPYICGEWDLGGFP 136
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.325 0.143 0.466
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 4,446,156
Number of extensions: 176370
Number of successful extensions: 359
Number of sequences better than 1.0e-10: 14
Number of HSP's gapped: 359
Number of HSP's successfully gapped: 14
Length of query: 143
Length of database: 17,035,801
Length adjustment: 91
Effective length of query: 52
Effective length of database: 12,284,327
Effective search space: 638785004
Effective search space used: 638785004
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 151 (62.8 bits)