Os10g0340600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycoside hydrolase, family 35 protein.
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Os10g0340600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glycoside hydrolase, family 35 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 45.91 | 0.318 | -3160 | 19300 | 0.0195 | -602000 | -0.0973 | 3680000 | 0.0299 | 5.11 | 1 | 4 | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 49.38 | 0.329 | 2.85 | 0.00174 | 0.0116 | -- | 0.23 | -- | 0.0194 | 16.8 | -- | -- | -- | -- |
| 49.51 | 0.33 | 2.85 | 0.00289 | 0.0166 | -- | -- | -- | 0.0206 | 14 | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 49.53 | 0.329 | 2.85 | 0.0022 | -- | -- | -- | -- | 0.0202 | -- | -- | -- | -- | -- |
| 49.51 | 0.329 | 2.85 | -- | 0.0165 | -- | -- | -- | 0.0203 | 14 | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 49.53 | 0.328 | 2.85 | -- | -- | -- | -- | -- | 0.02 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 40.01 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 18 | 2 |
| 2 | 40.01 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 18 | 2 |
| 30 | 41.34 | humidity | 70 | 90 | < th | dose independent | rect. | 18 | 1 |
| 59 | 43.61 | humidity | 70 | 90 | < th | dose dependent | rect. | 18 | 1 |
| 77 | 44.20 | atmosphere | 995 | 270 | > th | dose independent | sin | 9 | NA |
| 85 | 44.40 | atmosphere | 995 | 270 | < th | dose independent | sin | 9 | NA |
| 86 | 44.40 | temperature | 30 | 270 | > th | dose dependent | rect. | 16 | 19 |
| 181 | 44.75 | atmosphere | 995 | 270 | < th | dose dependent | sin | 9 | NA |
| 204 | 44.78 | temperature | 30 | 270 | > th | dose independent | rect. | 18 | 15 |
| 299 | 45.18 | radiation | 10 | 270 | > th | dose dependent | rect. | 17 | 1 |
| 301 | 45.18 | temperature | 30 | 270 | > th | dose dependent | rect. | 16 | 3 |
| 337 | 45.29 | temperature | 30 | 270 | > th | dose independent | rect. | 16 | 18 |
| 357 | 45.33 | radiation | 10 | 270 | > th | dose independent | rect. | 17 | 1 |
| 380 | 45.41 | temperature | 30 | 270 | > th | dose independent | rect. | 18 | 1 |
| 474 | 45.73 | atmosphere | 1000 | 720 | < th | dose independent | rect. | 9 | 2 |
| 489 | 45.76 | wind | 7 | 90 | > th | dose dependent | rect. | 18 | 1 |
| 503 | 45.87 | atmosphere | 1000 | 720 | < th | dose dependent | rect. | 9 | 3 |
| 507 | 45.91 | atmosphere | 995 | 270 | < th | dose dependent | no | NA | NA |
| 699 | 45.93 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 10 | 1 |
| 701 | 45.94 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 10 | 2 |
| 746 | 46.10 | wind | 7 | 90 | > th | dose independent | rect. | 18 | 1 |
| 750 | 46.11 | wind | 7 | 90 | > th | dose dependent | rect. | 18 | 3 |
| 759 | 46.13 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 10 | 11 |
| 760 | 46.14 | atmosphere | 995 | 270 | < th | dose independent | no | NA | NA |