Os12g0429200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Relative to SR12 protein (Fragment).
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Os12g0429200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Relative to SR12 protein (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 301.13 | 0.815 | 7.03 | -0.747 | 0.503 | 2.02 | 0.404 | 2.92 | -0.844 | 18.6 | 67 | 6256 | -- | -- |
| 302.9 | 0.811 | 7.03 | -0.662 | 0.482 | 2.16 | 0.784 | -- | -0.946 | 18 | 68 | 7657 | -- | -- |
| 301.45 | 0.809 | 7.03 | -0.751 | 0.506 | 2.01 | -- | 2.97 | -0.841 | 18.8 | 67.04 | 6255 | -- | -- |
| 302.78 | 0.81 | 7.07 | -0.694 | 0.484 | 2.19 | -- | -- | -1.11 | 18.5 | 68 | 7635 | -- | -- |
| 313.59 | 0.825 | 7.02 | -0.741 | -- | 2.13 | -- | 2.72 | -0.856 | -- | 67.03 | 6346 | -- | -- |
| 382.05 | 0.916 | 7.01 | -0.984 | 0.651 | -- | 0.393 | -- | -0.823 | 18.7 | -- | -- | -- | -- |
| 382.42 | 0.916 | 7.01 | -0.991 | 0.652 | -- | -- | -- | -0.822 | 18.8 | -- | -- | -- | -- |
| 314.14 | 0.825 | 7.07 | -0.687 | -- | 2.28 | -- | -- | -1.13 | -- | 69 | 7666 | -- | -- |
| 315.33 | 0.827 | 7.07 | -- | 0.476 | 2.36 | -- | -- | -1.08 | 18.8 | 68 | 7635 | -- | -- |
| 404.66 | 0.94 | 7 | -1.01 | -- | -- | -- | -- | -0.834 | -- | -- | -- | -- | -- |
| 408.29 | 0.945 | 6.99 | -- | 0.664 | -- | -- | -- | -0.712 | 18.7 | -- | -- | -- | -- |
| 325.73 | 0.841 | 7.02 | -- | -- | 2.47 | -- | -- | -0.949 | -- | 67.01 | 7677 | -- | -- |
| 431.3 | 0.969 | 6.97 | -- | -- | -- | -- | -- | -0.723 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 306.20 | humidity | 70 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 2 | 306.80 | humidity | 60 | 14400 | > th | dose independent | rect. | 13 | 20 |
| 3 | 306.84 | humidity | 60 | 14400 | < th | dose independent | rect. | 12 | 21 |
| 5 | 306.90 | humidity | 60 | 14400 | > th | dose independent | rect. | 13 | 5 |
| 7 | 306.95 | humidity | 60 | 14400 | < th | dose independent | rect. | 12 | 6 |
| 16 | 307.32 | humidity | 60 | 14400 | > th | dose independent | sin | 15 | NA |
| 20 | 307.35 | humidity | 60 | 14400 | < th | dose independent | rect. | 11 | 11 |
| 49 | 307.40 | humidity | 60 | 14400 | > th | dose independent | rect. | 13 | 13 |
| 50 | 307.40 | humidity | 60 | 14400 | > th | dose independent | rect. | 13 | 15 |
| 51 | 307.40 | humidity | 60 | 14400 | > th | dose independent | rect. | 13 | 17 |
| 58 | 307.43 | humidity | 60 | 14400 | > th | dose independent | rect. | 13 | 8 |
| 74 | 307.47 | humidity | 60 | 14400 | < th | dose independent | sin | 17 | NA |
| 91 | 307.74 | humidity | 70 | 14400 | < th | dose dependent | rect. | 12 | 6 |
| 111 | 307.98 | humidity | 70 | 14400 | < th | dose dependent | rect. | 12 | 21 |
| 152 | 308.26 | humidity | 70 | 14400 | < th | dose dependent | rect. | 12 | 9 |
| 184 | 308.47 | humidity | 70 | 14400 | < th | dose dependent | rect. | 16 | 17 |
| 193 | 308.60 | humidity | 70 | 14400 | < th | dose independent | rect. | 17 | 16 |
| 195 | 308.64 | humidity | 60 | 14400 | < th | dose independent | rect. | 20 | 22 |
| 196 | 308.65 | humidity | 60 | 14400 | < th | dose independent | rect. | 6 | 12 |
| 206 | 308.65 | humidity | 60 | 14400 | > th | dose independent | rect. | 20 | 22 |
| 210 | 308.67 | humidity | 60 | 14400 | > th | dose independent | rect. | 23 | 19 |
| 215 | 308.68 | humidity | 60 | 14400 | > th | dose independent | rect. | 6 | 12 |
| 217 | 308.68 | humidity | 60 | 14400 | > th | dose independent | rect. | 3 | 15 |
| 218 | 308.68 | humidity | 60 | 14400 | > th | dose independent | rect. | 1 | 17 |
| 255 | 308.79 | humidity | 60 | 14400 | < th | dose independent | no | NA | NA |
| 257 | 308.79 | humidity | 60 | 14400 | < th | dose independent | rect. | 6 | 16 |
| 365 | 308.89 | humidity | 60 | 14400 | > th | dose independent | no | NA | NA |
| 368 | 308.89 | humidity | 60 | 14400 | > th | dose independent | rect. | 5 | 20 |
| 371 | 308.89 | humidity | 60 | 14400 | > th | dose independent | rect. | 3 | 22 |
| 376 | 308.89 | humidity | 60 | 14400 | > th | dose independent | rect. | 23 | 23 |
| 377 | 308.89 | humidity | 70 | 14400 | < th | dose dependent | sin | 17 | NA |
| 378 | 308.90 | humidity | 60 | 14400 | > th | dose independent | rect. | 7 | 17 |
| 381 | 308.90 | humidity | 60 | 14400 | > th | dose independent | rect. | 3 | 19 |
| 415 | 308.91 | humidity | 70 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 417 | 308.91 | humidity | 60 | 14400 | > th | dose independent | rect. | 7 | 15 |
| 419 | 308.91 | humidity | 60 | 14400 | > th | dose independent | rect. | 5 | 16 |
| 479 | 309.02 | humidity | 60 | 14400 | < th | dose independent | rect. | 15 | 23 |
| 483 | 309.04 | humidity | 70 | 14400 | < th | dose dependent | rect. | 13 | 2 |
| 513 | 309.23 | humidity | 60 | 14400 | > th | dose independent | rect. | 15 | 23 |
| 525 | 309.36 | humidity | 90 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 550 | 309.53 | humidity | 60 | 14400 | > th | dose independent | rect. | 17 | 23 |
| 581 | 309.73 | humidity | 70 | 14400 | < th | dose dependent | rect. | 16 | 2 |
| 619 | 309.92 | humidity | 70 | 14400 | > th | dose independent | rect. | 17 | 16 |
| 627 | 310.04 | humidity | 70 | 14400 | < th | dose dependent | rect. | 20 | 23 |
| 653 | 310.12 | humidity | 70 | 14400 | < th | dose dependent | rect. | 8 | 14 |
| 685 | 310.16 | humidity | 70 | 14400 | < th | dose dependent | no | NA | NA |
| 868 | 311.45 | humidity | 80 | 4320 | < th | dose independent | rect. | 19 | 1 |