Os01g0533400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycoside hydrolase, family 35 protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0533400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Glycoside hydrolase, family 35 protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 55.99 | 0.352 | 3.02 | 0.0713 | 0.0859 | 0.908 | -0.0276 | -2 | -0.0324 | 9.16 | 1011 | 56 | -- | -- |
| 58.92 | 0.358 | 3.02 | 0.0141 | 0.09 | 0.979 | 0.0314 | -- | -0.0376 | 9.38 | 1010 | 69 | -- | -- |
| 55.99 | 0.348 | 3.02 | 0.0703 | 0.0863 | 0.91 | -- | -2 | -0.0326 | 9.18 | 1011 | 56 | -- | -- |
| 58.92 | 0.358 | 3.02 | 0.0112 | 0.0867 | 0.971 | -- | -- | -0.0408 | 9.21 | 1010 | 69 | -- | -- |
| 56.41 | 0.35 | 3.02 | 0.0713 | -- | 0.895 | -- | -2 | -0.032 | -- | 1011 | 56 | -- | -- |
| 65.22 | 0.379 | 3.03 | -0.0239 | 0.083 | -- | -0.027 | -- | -0.0753 | 9.06 | -- | -- | -- | -- |
| 65.23 | 0.378 | 3.03 | -0.0248 | 0.083 | -- | -- | -- | -0.0753 | 9.09 | -- | -- | -- | -- |
| 59.35 | 0.359 | 3.02 | 0.0109 | -- | 0.947 | -- | -- | -0.0421 | -- | 1010 | 69 | -- | -- |
| 58.93 | 0.358 | 3.02 | -- | 0.0865 | 0.97 | -- | -- | -0.0421 | 9.2 | 1010 | 69 | -- | -- |
| 65.62 | 0.379 | 3.03 | -0.025 | -- | -- | -- | -- | -0.0748 | -- | -- | -- | -- | -- |
| 65.24 | 0.378 | 3.03 | -- | 0.083 | -- | -- | -- | -0.0725 | 9.12 | -- | -- | -- | -- |
| 59.35 | 0.359 | 3.02 | -- | -- | 0.953 | -- | -- | -0.0411 | -- | 1010 | 69 | -- | -- |
| 65.64 | 0.378 | 3.03 | -- | -- | -- | -- | -- | -0.072 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 49.07 | humidity | 70 | 4320 | > th | dose independent | rect. | 20 | 11 |
| 2 | 49.36 | humidity | 70 | 4320 | > th | dose independent | rect. | 20 | 8 |
| 3 | 49.40 | humidity | 70 | 4320 | < th | dose independent | rect. | 20 | 11 |
| 5 | 49.47 | humidity | 70 | 4320 | < th | dose dependent | rect. | 20 | 11 |
| 9 | 49.59 | humidity | 70 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 11 | 49.64 | humidity | 70 | 4320 | > th | dose independent | rect. | 20 | 3 |
| 20 | 49.77 | humidity | 70 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 30 | 49.77 | humidity | 70 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 43 | 49.98 | humidity | 50 | 4320 | > th | dose independent | rect. | 16 | 1 |
| 45 | 51.02 | wind | 9 | 4320 | > th | dose dependent | rect. | 14 | 1 |
| 47 | 51.22 | atmosphere | 1010 | 10 | > th | dose dependent | rect. | 12 | 1 |
| 88 | 51.29 | atmosphere | 1010 | 30 | > th | dose dependent | sin | 21 | NA |
| 91 | 51.50 | radiation | 1 | 270 | < th | dose independent | rect. | 8 | 1 |
| 92 | 51.50 | radiation | 1 | 270 | < th | dose dependent | rect. | 8 | 1 |
| 153 | 51.69 | atmosphere | 1010 | 30 | > th | dose dependent | sin | 3 | NA |
| 164 | 51.76 | atmosphere | 1010 | 10 | > th | dose dependent | rect. | 24 | 13 |
| 597 | 52.83 | wind | 9 | 4320 | > th | dose independent | rect. | 14 | 1 |
| 619 | 53.28 | humidity | 70 | 4320 | > th | dose independent | rect. | 4 | 3 |
| 623 | 53.35 | humidity | 70 | 4320 | < th | dose independent | rect. | 6 | 1 |
| 633 | 53.36 | humidity | 70 | 4320 | < th | dose dependent | rect. | 6 | 1 |
| 644 | 53.40 | humidity | 50 | 10 | > th | dose independent | sin | 7 | NA |
| 648 | 53.46 | humidity | 70 | 4320 | > th | dose independent | rect. | 2 | 5 |
| 675 | 53.80 | humidity | 70 | 4320 | > th | dose independent | rect. | 6 | 1 |
| 698 | 54.09 | humidity | 70 | 4320 | < th | dose dependent | rect. | 19 | 14 |
| 710 | 54.17 | wind | 9 | 4320 | < th | dose independent | rect. | 14 | 1 |
| 767 | 54.48 | humidity | 70 | 4320 | < th | dose dependent | rect. | 18 | 1 |
| 770 | 54.52 | humidity | 70 | 4320 | < th | dose dependent | rect. | 18 | 3 |
| 838 | 54.65 | radiation | 20 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 893 | 54.65 | radiation | 20 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 952 | 54.76 | humidity | 50 | 4320 | < th | dose independent | rect. | 10 | 2 |
| 987 | 54.88 | humidity | 50 | 4320 | > th | dose independent | rect. | 4 | 8 |
| 997 | 54.92 | humidity | 50 | 4320 | > th | dose independent | rect. | 9 | 3 |
| 998 | 54.93 | humidity | 50 | 4320 | > th | dose independent | rect. | 2 | 10 |