BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0559000 Os09g0559000|Os09g0559000
(525 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os09g0559000 Zinc finger, RING-type domain containing protein 930 0.0
Os08g0540300 Zinc finger, RING-type domain containing protein 438 e-123
Os09g0559100 Zinc finger, C6HC-type domain containing protein 398 e-111
Os09g0513800 Similar to ARIADNE-like protein 395 e-110
Os04g0492100 Similar to ARIADNE-like protein 393 e-109
Os03g0233500 UBA-like domain containing protein 191 9e-49
AK110331 184 1e-46
Os03g0625800 Zinc finger, RING-type domain containing protein 161 1e-39
Os03g0626100 Zinc finger, RING-type domain containing protein 132 8e-31
Os03g0626000 132 8e-31
Os08g0451800 Zinc finger, RING-type domain containing protein 79 6e-15
Os08g0451900 Zinc finger, RING-type domain containing protein 77 4e-14
Os09g0283600 Zinc finger, RING-type domain containing protein 76 8e-14
Os09g0420000 Zinc finger, RING-type domain containing protein 68 2e-11
Os09g0419600 Zinc finger, RING-type domain containing protein 65 1e-10
>Os09g0559000 Zinc finger, RING-type domain containing protein
Length = 525
Score = 930 bits (2403), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/489 (94%), Positives = 460/489 (94%)
Query: 37 QVVEETEAPAMEKTYVVLTEDDVRARQEEDIAKVCEVLSLSPGAAAVLLRLYRWRAVLLQ 96
QVVEETEAPAMEKTYVVLTEDDVRARQEEDIAKVCEVLSLSPGAAAVLLRLYRWRAVLLQ
Sbjct: 37 QVVEETEAPAMEKTYVVLTEDDVRARQEEDIAKVCEVLSLSPGAAAVLLRLYRWRAVLLQ 96
Query: 97 EEWFLDERRIRXXXXXXXXXXXXXEVPARVNRRRLTCAICFDVFDTGGMRSAGCSHFYCV 156
EEWFLDERRIR EVPARVNRRRLTCAICFDVFDTGGMRSAGCSHFYCV
Sbjct: 97 EEWFLDERRIRDAAGLLPADGGGGEVPARVNRRRLTCAICFDVFDTGGMRSAGCSHFYCV 156
Query: 157 SCWRGYVRAAVGDGARCLSLRCPDPSCPAAVVRELVDAVADGEDRERFGWFALRSYVEES 216
SCWRGYVRAAVGDGARCLSLRCPDPSCPAAVVRELVDAVADGEDRERFGWFALRSYVEES
Sbjct: 157 SCWRGYVRAAVGDGARCLSLRCPDPSCPAAVVRELVDAVADGEDRERFGWFALRSYVEES 216
Query: 217 AGMRWCPGPGCSRAXXXXXXXXXXXXXXXXCSCGHGLCWRCGEEAHRPVSCKTVAKWVEK 276
AGMRWCPGPGCSRA CSCGHGLCWRCGEEAHRPVSCKTVAKWVEK
Sbjct: 217 AGMRWCPGPGCSRAVEFVGGGDGEESSEVFCSCGHGLCWRCGEEAHRPVSCKTVAKWVEK 276
Query: 277 NSSESETATWLLAHTKHCPKCRLPIEKNLGCMHMTCRPPCLHEFCWICLKPWHGHAACSR 336
NSSESETATWLLAHTKHCPKCRLPIEKNLGCMHMTCRPPCLHEFCWICLKPWHGHAACSR
Sbjct: 277 NSSESETATWLLAHTKHCPKCRLPIEKNLGCMHMTCRPPCLHEFCWICLKPWHGHAACSR 336
Query: 337 YQPNGTVVALAGANADDERRRQAKASLDRYLYHYERWDANLKSLRVALRDMESLERSELE 396
YQPNGTVVALAGANADDERRRQAKASLDRYLYHYERWDANLKSLRVALRDMESLERSELE
Sbjct: 337 YQPNGTVVALAGANADDERRRQAKASLDRYLYHYERWDANLKSLRVALRDMESLERSELE 396
Query: 397 AMASAAGVPATEMGFVTEAYEQVGEGRRVLGWAHAYGYYLDPDRDFTKRQLFEYLQEDAN 456
AMASAAGVPATEMGFVTEAYEQVGEGRRVLGWAHAYGYYLDPDRDFTKRQLFEYLQEDAN
Sbjct: 397 AMASAAGVPATEMGFVTEAYEQVGEGRRVLGWAHAYGYYLDPDRDFTKRQLFEYLQEDAN 456
Query: 457 ASLERLHGCAERERRELFAAGADDKAAVDFDKYRAYREKLAGLTRVTRQYFGNLVKAFET 516
ASLERLHGCAERERRELFAAGADDKAAVDFDKYRAYREKLAGLTRVTRQYFGNLVKAFET
Sbjct: 457 ASLERLHGCAERERRELFAAGADDKAAVDFDKYRAYREKLAGLTRVTRQYFGNLVKAFET 516
Query: 517 DLAEVSSSS 525
DLAEVSSSS
Sbjct: 517 DLAEVSSSS 525
>Os08g0540300 Zinc finger, RING-type domain containing protein
Length = 607
Score = 438 bits (1127), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/486 (44%), Positives = 299/486 (61%), Gaps = 24/486 (4%)
Query: 48 EKTYVVLTEDDVRARQEEDIAKVCEVLSLSPGAAAVLLRLYRWRAVLLQEEWFLDERRIR 107
E+ Y+VLTE D+ RQEEDI KV VLS+ A VLL Y+W L +EWF DE ++R
Sbjct: 76 EQRYIVLTEKDINERQEEDIGKVSAVLSIRREEACVLLHHYKWNISKLSDEWFADEEKVR 135
Query: 108 XXXXXXXXXXXXXEVPARVNRRRLTCAICFDVFDTGGMRSAGCSHFYCVSCWRGYVRAAV 167
++P N R+LTC ICF+ + + M SA C HFYC CW GY+ AA+
Sbjct: 136 DIVGLLLNGI---DLP---NSRKLTCGICFEGYSSDVMSSADCDHFYCHECWEGYISAAI 189
Query: 168 GDGARCLSLRCPDPSCPAAVVRELVDAVADGEDRERFGWFALRSYVEESAGMRWCPGPGC 227
DG CLSLRCPDPSC A V++ +++ +A +D+ R+ F LR+YVE+S +WCP P C
Sbjct: 190 SDGPGCLSLRCPDPSCGAMVLQNMINKLAKDDDKVRYARFILRAYVEDSKKTKWCPAPDC 249
Query: 228 SRAXXXXXXXXXXXXXXXXCSCGHGLCWRCGEEAHRPVSCKTVAKWVEKNSSESETATWL 287
+ A C+C CW C EEAHRPV+C+TV++W+ KNS+ESE W+
Sbjct: 250 TCAVEFVSDGNYDVS----CNCKFSFCWNCTEEAHRPVNCETVSRWILKNSAESENMNWI 305
Query: 288 LAHTKHCPKCRLPIEKNLGCMHMTCRPPCLHEFCWICLKPWHGHA-------ACSRYQPN 340
LA++K CPKC+ PIEKN GCMHMTC PPC EFCW+CL W H AC+RY+
Sbjct: 306 LANSKPCPKCKRPIEKNQGCMHMTCTPPCKFEFCWLCLGSWAEHGERTGGFYACNRYE-- 363
Query: 341 GTVVALAGANADDERRRQAKASLDRYLYHYERWDANLKSLRVALRDMESLERSELEAMAS 400
+ + + RR +AK SL+RY+++YERW +N S + A D++ E+ +L +
Sbjct: 364 -SAKKEGVYDETEARRERAKNSLERYMHYYERWASNQTSRQKAQADLQKAEKEQLAKLTD 422
Query: 401 AAGVPATEMGFVTEAYEQVGEGRRVLGWAHAYGYYLDPDRDFTKRQLFEYLQEDANASLE 460
G+P T++ F+ EA+ Q+ E RRVL W +AYGYYLD D K + FEYLQ +A + LE
Sbjct: 423 VFGIPETQLKFIIEAWSQIIECRRVLKWTYAYGYYLD---DKVKSEFFEYLQGEAESGLE 479
Query: 461 RLHGCAERERRELFAAGADD-KAAVDFDKYRAYREKLAGLTRVTRQYFGNLVKAFETDLA 519
RLH CAE++ + +D+ + A ++ +R KLAGLT VTR YF NLV+A E L
Sbjct: 480 RLHQCAEKDLQSFLTVRSDNTEPAPSIAEFGDFRVKLAGLTSVTRNYFENLVQALEAGLE 539
Query: 520 EVSSSS 525
+V S++
Sbjct: 540 DVHSTA 545
>Os09g0559100 Zinc finger, C6HC-type domain containing protein
Length = 579
Score = 398 bits (1023), Expect = e-111, Method: Compositional matrix adjust.
Identities = 229/502 (45%), Positives = 284/502 (56%), Gaps = 52/502 (10%)
Query: 47 MEKTYVVLTEDDVRARQEEDIAKVCEVLSLSPGAAAVLLRLYRWRAVLLQEEWFLDERRI 106
+++ Y L+E+ VRARQ+ D A V E+ ++ PG AAVLLR Y+W V LQ+ F D R
Sbjct: 67 IDRRYRNLSEEQVRARQDADTANVGELFAIPPGFAAVLLRHYKWSLVELQDRLFCDGDR- 125
Query: 107 RXXXXXXXXXXXXXEVPARVNRRRLTCAICFDVFDTGGMRSAGCSHFYCVSCWRGYVRAA 166
P N L CAICFD G MRSAGCSHFYCV CWRGYV AA
Sbjct: 126 ----AGAATGVALGGAPVSRNAHPLVCAICFDEHPAGEMRSAGCSHFYCVGCWRGYVHAA 181
Query: 167 VGDGARCLSLRCPDPSCPAAVVRELVDAVADGEDRERFGWFALRSYVEESAGMRWCPGPG 226
+V+R A R+ F LRSYVEE ++WCPGPG
Sbjct: 182 PVVPVP-----------GPSVLRRRGAA--------RYATFLLRSYVEEGTRIKWCPGPG 222
Query: 227 CSRAXX-XXXXXXXXXXXXXXCSCGHGLCWRCGEEAHRPVSCKTVAKWVEKNSSESETAT 285
C+ A C GHG C+RCGEEAHRPVSC+TV W EKN+ +SETA+
Sbjct: 223 CTLAIEFVGGGGGEEKQDDVECRHGHGFCFRCGEEAHRPVSCETVYAWSEKNAMKSETAS 282
Query: 286 WLLAHTKHCPKCRLPIEKNLGCMHMTCRPPCLHEFCWICLKPWHGHAACSRYQPNGTVVA 345
W+LA+TKHCPKCRLPIEKN GCMHMTCRPPCLHEFCW+CL PW H + Y N A
Sbjct: 283 WVLANTKHCPKCRLPIEKNRGCMHMTCRPPCLHEFCWLCLSPWSDHRSSEYYNCNVYDAA 342
Query: 346 LAGANADDERRR--QAKASLDRYLYHYERWDANLKSLRVALRDMESLERSELEAMASAAG 403
A A D++RR Q ASLDRY++ YERW A+ K+ + A+ DM L+ E +++A
Sbjct: 343 KANGEASDDKRRREQGMASLDRYMHFYERWAAHGKARQSAVDDMAGLDAC-AEKLSAAVA 401
Query: 404 VPATEMGFVTEAYEQVGEGRRVLGWAHAYGYY---LDPDRDFTKRQLFEYLQEDANASLE 460
+P TE+ F+ EAY+Q+ E RR+L W +AYGYY D D +R + E Q +A LE
Sbjct: 402 MPVTELCFLAEAYQQIAECRRLLRWTYAYGYYHLGTGLDGDEERRTMVECAQGEAERQLE 461
Query: 461 RLHGCAERERRELFA---------------------AGADDKAAVDFDKYRAYREKLAGL 499
+LH CAE ER EL A +DKA D AYR+KL+GL
Sbjct: 462 KLHDCAEHEREELLAEVERTIKLNAILKDNDGEESKKKMEDKAGEMVDMVVAYRQKLSGL 521
Query: 500 TRVTRQYFGNLVKAFETDLAEV 521
T V + +F NLVK F+ L EV
Sbjct: 522 TGVCKIFFRNLVKTFQDGLLEV 543
>Os09g0513800 Similar to ARIADNE-like protein
Length = 516
Score = 395 bits (1014), Expect = e-110, Method: Compositional matrix adjust.
Identities = 196/467 (41%), Positives = 270/467 (57%), Gaps = 27/467 (5%)
Query: 67 IAKVCEVLSLSPGAAAVLLRLYRWRAVLLQEEWFLDERRIRXXXXXXXXXXXXXEVPARV 126
I++V + S+ +A VLLR Y+W L ++WF DE +R + P
Sbjct: 2 ISRVSAIFSVPRESACVLLRHYKWSISKLSDDWFADEENVRRSVGLPSNVVHVPDCP--- 58
Query: 127 NRRRLTCAICFDVFDTGGMRSAGCSHFYCVSCWRGYVRAAVGDGARCLSLRCPDPSCPAA 186
LTC ICF+ M AGCSHFYC CW GY+ AAV DG CL L+CP+PSC A
Sbjct: 59 ---ELTCGICFEGCAANAMSCAGCSHFYCHECWEGYISAAVNDGPGCLVLQCPEPSCDAI 115
Query: 187 VVRELVDAVADGEDRERFGWFALRSYVEESAGMRWCPGPGCSRAXXXXXXXXXXXXXXXX 246
V+ ++++++ ED+ ++ F L SY+ + ++WCP P C+ A
Sbjct: 116 VLEDMINSLTKDEDKVKYARFVLWSYIGVNNKIKWCPAPDCTCAVEFLGDGNYDVS---- 171
Query: 247 CSCGHGLCWRCGEEAHRPVSCKTVAKWVEKNSSESETATWLLAHTKHCPKCRLPIEKNLG 306
C C CW C EEAHRPVSC TV+KW+ KNS+ESE W+LA++K CPKC+ PIEKN G
Sbjct: 172 CKCKFSFCWNCAEEAHRPVSCDTVSKWILKNSAESENMNWILAYSKPCPKCKRPIEKNQG 231
Query: 307 CMHMTCRPPCLHEFCWICLKPWHGHA-------ACSRYQPNGTVVALAGANAD--DERRR 357
CMHMTC PPC EFCW+CL W H AC+RYQ A G D + RR
Sbjct: 232 CMHMTCTPPCKFEFCWLCLGAWSDHGDGTGGFYACNRYQS-----AKMGGMYDEAEARRE 286
Query: 358 QAKASLDRYLYHYERWDANLKSLRVALRDMESLERSELEAMASAAGVPATEMGFVTEAYE 417
+AK SL+RY+++YERW +N S + A D++ +E +L ++ G+P T++ F+ EA+
Sbjct: 287 RAKNSLERYMHYYERWASNQTSRQKAQADLQKVENEDLTKLSDVVGIPETQLKFIPEAWS 346
Query: 418 QVGEGRRVLGWAHAYGYYLDPDRDFTKRQLFEYLQEDANASLERLHGCAERERRELFAAG 477
Q+ E RRVL W +AYGYYL + K F YLQ +A + LERLH CAE++ RE
Sbjct: 347 QIIECRRVLKWTYAYGYYL---HNKAKSDFFVYLQGEAESGLERLHKCAEKDMREFLPTA 403
Query: 478 ADDKAAVDFDKYRAYREKLAGLTRVTRQYFGNLVKAFETDLAEVSSS 524
+ ++ + +R KL+GLT VTR YF NLV+ E L +V ++
Sbjct: 404 DSTQPSLSLQDFGEFRVKLSGLTSVTRNYFENLVQTLEAGLQDVRAT 450
>Os04g0492100 Similar to ARIADNE-like protein
Length = 464
Score = 393 bits (1009), Expect = e-109, Method: Compositional matrix adjust.
Identities = 196/407 (48%), Positives = 259/407 (63%), Gaps = 22/407 (5%)
Query: 127 NRRRLTCAICFDVFDTGGMRSAGCSHFYCVSCWRGYVRAAVGDGARCLSLRCPDPSCPAA 186
N R LTC ICF+ M +A C H +C +CWRGY+ ++ DG CL LRCPDPSC AA
Sbjct: 3 NDRELTCGICFENCPRTSMSAAACGHPFCSACWRGYISTSINDGPGCLMLRCPDPSCTAA 62
Query: 187 VVRELVDAVADGEDRERFGWFALRSYVEESAGMRWCPGPGCSRAXXXXXXXXXXXXXXXX 246
V +++++++AD EDRE++G + RSY+E++ +WCP PGC A
Sbjct: 63 VGQDMINSLADDEDREKYGRYLRRSYIEDNRKTKWCPAPGCEYAVEFVMGSGSYDVN--- 119
Query: 247 CSCGHGLCWRCGEEAHRPVSCKTVAKWVEKNSSESETATWLLAHTKHCPKCRLPIEKNLG 306
C+C +G CW C EEAHRPV C TV+KW+ KNS+ESE W+LA++K CPKC+ PIEKN G
Sbjct: 120 CNCSYGFCWNCTEEAHRPVDCATVSKWILKNSAESENMNWILANSKPCPKCKRPIEKNQG 179
Query: 307 CMHMTCRPPCLHEFCWICLKPWHGHA-------ACSRYQPNGTVVALAGANADDERRRQ- 358
CMH+TC PPC EFCW+CL PW H AC+RY+ GA + ERRR+
Sbjct: 180 CMHITCTPPCKFEFCWLCLGPWSEHGERTGGFYACNRYE----AARQEGAYDESERRREM 235
Query: 359 AKASLDRYLYHYERWDANLKSLRVALRDMESLERSELEAMASAAGVPATEMGFVTEAYEQ 418
AK SL+RY ++YERW AN S + AL D+ SL+ +LE ++ P +++ F+ EA+ Q
Sbjct: 236 AKNSLERYTHYYERWAANQSSRQKALGDLLSLQNDKLEKLSDIQSQPESQLKFIIEAWLQ 295
Query: 419 VGEGRRVLGWAHAYGYYLDPDRDFTKRQLFEYLQEDANASLERLHGCAERERRELFAAGA 478
+ E RRVL W +AYG+YL P+ + KRQ FEYLQ +A + LERLH CAE+E + A +
Sbjct: 296 IVECRRVLKWTYAYGFYL-PEHEHAKRQFFEYLQGEAESGLERLHQCAEKELQVYLEAES 354
Query: 479 DDKAAVDFDKYRAYREKLAGLTRVTRQYFGNLVKAFETDLAEVSSSS 525
K DF R KLAGLT VTR YF NLV+A ET L +V S+
Sbjct: 355 PSKDFNDF------RTKLAGLTSVTRNYFENLVRALETGLNDVGPST 395
>Os03g0233500 UBA-like domain containing protein
Length = 612
Score = 191 bits (486), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 138/486 (28%), Positives = 223/486 (45%), Gaps = 51/486 (10%)
Query: 53 VLTEDDVRARQEEDIAKVCEVLSLSPGAAAVLLRLYRWRAVLLQEEWFLDERRIRXXXXX 112
V+T++ + A Q ED+ KV E+L L A LL YRW + E LD++
Sbjct: 59 VITKESLLAAQREDLRKVMELLGLREHHARTLLIHYRWDVERIFE--LLDQKGRDRLFSE 116
Query: 113 XXXXXXXXEVPARVNRRRLTCAICFDVFDTGGMRSAGCSHFYCVSCWRGYVRAAVGDGA- 171
P + +TC +C+D C H YC CW GY + +G
Sbjct: 117 AGIPLQPANNPGSPSSTEVTCNVCYDDVPLSDASKMDCGHNYCNECWTGYFIVKINEGQS 176
Query: 172 ---RCLSLRCPDPSCPAAVVRELVDAVADGEDRERFGWFALRSYVEESAGMRWCPG-PGC 227
+C++L+C + C A+VR+LV+A + ERF F L SY+E++ ++WCP P C
Sbjct: 177 RRIKCMALKC-NTICDEAIVRKLVNA-KRPDIAERFERFLLESYIEDNDTVKWCPSTPHC 234
Query: 228 SRAXXXXXXXXXXXXXXXXCSCGHGLCWRCGEEAHRPVSCKTVAKWVEKNSSESETATWL 287
A C+CG C+ C EAH P SC W++K ESET W+
Sbjct: 235 GNAIRVKGDIHCEVE----CTCGRQFCFNCSSEAHSPCSCVMWELWIKKCRDESETVNWI 290
Query: 288 LAHTKHCPKCRLPIEKNLGCMHMTCRPPCLHEFCWICLKPWHGHAACSRYQPNGTVVALA 347
+TK CPKC P+EKN GC + C C FCW+C G A + +
Sbjct: 291 TVNTKPCPKCHKPVEKNGGCNLVAC--ICGQAFCWLC-----GGATGRDHTWSSISGHSC 343
Query: 348 GANADDERRR--QAKASLDRYLYHYERWDANLKSLRVALRDMESLERSELEAMASAAGVP 405
G +D+ ++ QA+ +L RY++++ R+ A+ SL+ E+ + +++ S +
Sbjct: 344 GRFTEDQSKKTEQARRNLYRYMHYHNRYKAHTDSLK-----QEAKLKGDIQGKISISENK 398
Query: 406 ATEM---GFVTEAYEQVGEGRRVLGWAHAYGYYLDPDRDFT----------KRQLFEYLQ 452
+++ +V ++ RRVL +++ + +Y+ D F K+ LFE Q
Sbjct: 399 DSKIKDYSWVINGLNRLFRSRRVLSYSYPFAFYMFGDEIFKDEMTSDERELKQNLFEDQQ 458
Query: 453 EDANASLERLHGCAERERRELFAAGADDKAAVDFDKYRAYREKLAGLTRVTRQYFGNLVK 512
+ ++ERL G ER+ F +DD+ +D K+ + L+ V + + +
Sbjct: 459 QQLEFNVERLSGFLERD----FQNFSDDE-VMDTMKH------VINLSNVVDRLCKQMYQ 507
Query: 513 AFETDL 518
E DL
Sbjct: 508 CIENDL 513
>AK110331
Length = 674
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 123/433 (28%), Positives = 200/433 (46%), Gaps = 34/433 (7%)
Query: 49 KTYVVLTEDDVRARQEEDIAKVCEVLSLSPGAAAVLLRLYRWRAVLLQEEWFLDERRIRX 108
++Y +L + ++ Q E I V LS++ AA LLR ++W L + W D +
Sbjct: 245 RSYKILPKHELMPVQREMIEGVASKLSVTISAAGQLLRAHKWDDEALLKAWSADHAAVAK 304
Query: 109 XXXXXXXXXXXXEVPARVNRRRLTCAICFDVFDTGGMRSAGCSHFYCVSCWRGYVRAAVG 168
PA + +C +CFD G + C H +C+ CW+ Y++++V
Sbjct: 305 KANVTAILRQVMSAPAD-PEKLCSCGVCFDDVKEGLTFAMKCGHRFCIPCWKDYLKSSVD 363
Query: 169 DGA----RCLSLRCPDPSCPAAVVRELVDAVADGEDRERFGWFALRSYVEESAGMRWCPG 224
GA CLS CP C + ++ + + D +++ L S+V+++ + WCPG
Sbjct: 364 SGASAGGNCLSSTCPGFKCKELLGEQIYEMLCDEASFKKYRDVQLLSFVDDNESITWCPG 423
Query: 225 PGCSRAXXXXXXXXXXXXXXXXCSCGHGLCWRCGEEAHRPVSCKTVAKWVEKN-SSESET 283
GC C+CG C++C EAH P +CK A W+ ++ S++
Sbjct: 424 KGCGNV-----IAFSKRKKTVYCTCGQRFCFKCKAEAHAPTTCKEAADWLARDKGSQNLD 478
Query: 284 ATWLLAHTKHCPKCRLPIEKNLGCMHMTCRPPCLHEFCWICLKPWHGHAACSRYQPNGTV 343
+ +LL TK CP C + ++K+ GCM+M+C C +CW C K H C+R P V
Sbjct: 479 SKFLLEETKPCPHCGVRVKKDGGCMYMSCT-QCKKAWCWQCGKSDHHVWECNR--PPYEV 535
Query: 344 VALAGANADDERRRQAKASLDRYLYHYERWDANLKSLRVALRDMESLERSELEAMASAA- 402
G D K ++RYL+++ER+ + +SL++A + ++ ++ M S
Sbjct: 536 ----GKPGD-------KDDVNRYLFYFERYFNHGQSLKIA----DKQRQATMDKMKSLVK 580
Query: 403 -GVPATEMGFVTEAYEQVGEGRRVLGWAHAYGYYLDPDRDFTKRQLFEYLQEDANASLER 461
G+ + F+ A E V E RRVL W + Y D R LFEY Q + E+
Sbjct: 581 EGLHFQRVEFLLRATELVLECRRVLKWTYVKAYNFKSKAD---RTLFEYRQSELEKYTEK 637
Query: 462 LHGCAERERRELF 474
L+ E EL
Sbjct: 638 LNQLTEGSLEELL 650
>Os03g0625800 Zinc finger, RING-type domain containing protein
Length = 540
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 123/488 (25%), Positives = 217/488 (44%), Gaps = 53/488 (10%)
Query: 54 LTEDDVRARQEEDIAKVCEVLSLSPGAAAVLLRLYRWRAVLLQEEWFLDERRIRXXXXXX 113
+T++ + A Q++D++ V +L++ A LL +RW+ + + +R+ R
Sbjct: 56 ITQESLPAAQQQDLSMVMNLLNIKQHLARTLLIHHRWKMHCIYDHL---DRKGRDRMLSE 112
Query: 114 XXXXXXXEVPARVNRRRLTCAICFDVFDTGGMRSAGCSHFYCVSCWRGYVRAAVGDG--- 170
+ + +TC +CF+ F + + C H +C CW + A++ G
Sbjct: 113 ACIILPKNSMSAASSTSVTCNVCFEDFSMTDVSTMDCGHCFCNDCWTEHFFASINTGNKQ 172
Query: 171 ARCLSLRCPDPSCPAAVVRELVDAVADGEDRERFGWFALRSYVEESAGMRWCP-GPGCSR 229
RC+ ++C C +VR L+ + RF L SY+E++ ++WCP P C R
Sbjct: 173 IRCMEVKC-KAICDEDIVRRLLSLKYPAASK-RFDLLLLESYLEDNDSVKWCPSAPHCGR 230
Query: 230 AXXXXXXXXXXXXXXXXCSCGHGLCWRCGEEAHRPVSCKTVAKWVEKNSSESETATWLLA 289
A C CG C+ C + H P C KW K +S++ W+LA
Sbjct: 231 AIQVGTGERYCEVA---CPCGVSFCFNCAGQVHSPCPCAIWEKWKAKGHGDSDSVKWILA 287
Query: 290 HTKHCPKCRLPIEKNLGCMHMTCRPPCLHEFCWICLKP------W---HGHAACSRY-QP 339
+TK CPKC PIEKN GC + C+ C CW+C P W GH +C+RY +
Sbjct: 288 NTKSCPKCSKPIEKNGGCNLVHCK--CGQCLCWLCGGPTGREHTWDSISGH-SCNRYKEE 344
Query: 340 NGTVVALAGANADDERRRQAKASLDRYLYHYERWDANLKSLRVALRDMESLERSELEAMA 399
NG V D R+Q + RY ++++R++ + S +V +D+ +++ +
Sbjct: 345 NGDKV--------DTSRQQ----MQRYTHYWDRYNIHAGSYKVEQKDLGPAVEEQVKKLE 392
Query: 400 SAAGVPAT--EMGFVTEAYEQVGEGRRVLGWAHAYGYYLDPDRDFTKRQ-------LFEY 450
S P + ++ AY+ + R+VL ++A+ YY+ + + +
Sbjct: 393 SNLTGPKMNWDGSWLAMAYQSLLASRQVLSRSYAFAYYMFGGGEVKTHPSERASLAVAQN 452
Query: 451 LQEDANASLERLHGCAERERRELFAAGADDKAAVDFDKYRAYREKLAGLTRVTRQYFGNL 510
L ED LER E +EL A D + ++ + ++A L ++ + G L
Sbjct: 453 LFEDRQEQLERH---VEHLSKEL----ATDLLGLPEEEIVLKKVEIANLAKIVQAICGQL 505
Query: 511 VKAFETDL 518
+ + +L
Sbjct: 506 YRCIQDEL 513
>Os03g0626100 Zinc finger, RING-type domain containing protein
Length = 570
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 115/418 (27%), Positives = 185/418 (44%), Gaps = 40/418 (9%)
Query: 54 LTEDDVRARQEEDIAKVCEVLSLSPGAAAVLLRLYRW-------RAVLLQEEWFLDERRI 106
+T++ + A QE+D++ V ++++ A LL +RW R ++ + L + +
Sbjct: 59 ITKESLAAAQEQDLSMVMNLVNVERHNARALLAHHRWKMERIYDRLDMMGRDALLRDAGV 118
Query: 107 -----RXXXXXXXXXXXXXEVPARVNRRRLTCAICFDVFDTGGMRSAGCSHFYCVSCWRG 161
+ P V +TC +CF+ + G + + C H +C CW
Sbjct: 119 VVLPEKSSSSGSSMAMAKTNPPGSVA---VTCNVCFEEYPLGSVSAMDCGHCFCNDCWTE 175
Query: 162 YVRAAVGDGA---RCLSLRCPDPSCPAAVVRELVDAVADGEDRERFGWFALRSYVEESAG 218
Y AAV DG+ RC+ ++C C AVVR L+ G R L + VE S
Sbjct: 176 YFAAAVSDGSKQMRCMEVKC-TAICDEAVVRLLLHGKHPGA-AARLDRRLLEACVEASDA 233
Query: 219 MRWCP-GPGCSRAXXXXXXXXXXX-XXXXXCSCGHGLCWRCGEEAHRPVSCKTVAKW-VE 275
+RWCP P C RA C CG C+RCG AH P C KW
Sbjct: 234 VRWCPSAPHCGRAIRVDGGGGGEERYAEVSCPCGAVFCFRCGGGAHSPCPCPMWDKWGAM 293
Query: 276 KNSSESETATWLLAHTKHCPKCRLPIEKNLGCMHMTCRPPCLHEFCWIC---LKPWHGHA 332
+ E + W++A+TK CPKC PIEKN GC H+TC C C+ C + H
Sbjct: 294 RGGGEVDNLKWIVANTKSCPKCSKPIEKNGGCNHVTCT--CGQHLCYACGAATGTLYMH- 350
Query: 333 ACSRYQPNGTVVALAGANADDERRRQAKASLDRYLYHYERWDANLKSLRVALRDM----E 388
C+RY+ G + R+R R++++YER++ + +S + + +
Sbjct: 351 ICNRYKEEGGGGGVKVEMTAGGRQRL------RFMHYYERFEIHTESYKEEQGKLGPAID 404
Query: 389 SLERSELEAMASAAGVPATEMGFVTEAYEQVGEGRRVLGWAHAYGYYLDPDRDFTKRQ 446
+L R LEA A+ + + + A+ ++ R+VL ++ YY+ T+R+
Sbjct: 405 ALAR-RLEADATLPWSGTRDARWPSAAHRRLLRCRQVLPRSYVLAYYMFGGGAATRRE 461
>Os03g0626000
Length = 565
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 137/522 (26%), Positives = 208/522 (39%), Gaps = 63/522 (12%)
Query: 38 VVEETEAPAMEKTYVVLTEDDVRARQEEDIAKVCEVLSLSPGAAAVLLRLYRWRAVLLQE 97
V EE P +TE+ + A Q++D++ V +L + A LL +RW+ + +
Sbjct: 35 VEEEAALPERPVDCWAITEESLPAAQQQDLSMVMNLLYIKQHQARALLIHHRWKMESILD 94
Query: 98 EW-------FLDERRIRXXXXXXXXXXXXXEVPARVNRRR-----LTCAICFDVFDTGGM 145
+ L E + + A + +TC +CF+ + +
Sbjct: 95 HFDRKGRDRMLRETGVVIQQQAEEKNGGGMAMAASPSPPPRPRSSVTCYVCFEDVSSDAV 154
Query: 146 RSAGCSHFYCVSCWRGYVRAAVGDGA---RCLSLRCPDPSCPAAVVRELVDAVADGEDRE 202
+ C H +C CW + A V G RC+++ C C V + L+ G R
Sbjct: 155 STMDCGHCFCNDCWTEHFFACVNGGQKQIRCMAVGCA-AVCDEDVAQRLLGGRYPGAARR 213
Query: 203 RFGWFALRSYVEESAGMRWCP-GPGCSRAXXXXXXXXXXXXXXXXCSCGHGLCWRCGEEA 261
G L SYVE++A RWCP P C RA C CG C+ C A
Sbjct: 214 LRGAL-LASYVEDNAAARWCPSAPHCGRAVRVDGGGGRWCCEVS-CPCGASFCFGCAAPA 271
Query: 262 HRPVSCKTVAKWVEKNSSESETATWLLAHTKHCPKCRLPIEKNLGCMHMTCRPPCLHEFC 321
H P C +W K ES W+LA+TK CPKC PIEKN GC H+ C+ C C
Sbjct: 272 HSPCPCAMWERWEAKCRGESMNVDWILANTKSCPKCSKPIEKNGGCNHVRCK--CGQCLC 329
Query: 322 WICLKPWHGHAACSRYQPNGTVVALAGANADD---ERRR--QAKASLDRYLYHYERWDAN 376
W+C A + N T + N D E+R+ A+ + RY ++YER+ A+
Sbjct: 330 WLC-------GAATGLAHNWTSIDGHSCNRYDDAAEKRKVDGARRKVLRYAHYYERYKAH 382
Query: 377 LKSLRVALRDM--------ESLERSELEAMASAAGVPATEMGFVTEAYEQVGEGRRVLGW 428
S R + L A A A+G + A+ + R VL
Sbjct: 383 GDSRRAEAEKLGPAIEARARRLREDPDPATAPASG---DAAEALAAAHRALLASRDVLSR 439
Query: 429 AHAYGYYL-----------DPDRDF-TKRQLFEYLQEDANASLERLHGCAERERRELFAA 476
++A+ Y++ P+ + T + LFE QE A +E+L G L A
Sbjct: 440 SYAFAYHMFGGEERTLKAAAPESEVATAQALFEDHQEMAERHVEKLSGL-------LAAD 492
Query: 477 GADDKAAVDFDKYRAYREKLAGLTRVTRQYFGNLVKAFETDL 518
A R ++ LT V ++ G + K + +L
Sbjct: 493 APPAPATAGDAALRRAKQDAVALTAVVEKHCGEMHKCIQDEL 534
>Os08g0451800 Zinc finger, RING-type domain containing protein
Length = 315
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 94/221 (42%), Gaps = 13/221 (5%)
Query: 121 EVPARVNRRRLTCAICFDVFDTGGMRSA--GCSHFYCVSCWRGYVRAAVGDGARCLSLRC 178
+PA + C IC D A GC H +C +C GYV A + + R +RC
Sbjct: 100 SIPAAAATTLVFCKICMDAVPPSAAHRASRGCDHAFCAACLAGYVGAKIQE--RIADVRC 157
Query: 179 PDPSCPAAVVRELVDAVADGEDRERFGWFALRSYVEESAGMRWCPGPGCSRAXXXXXXXX 238
P+ C A+ EL + E +R+G AL + +A +CP CS
Sbjct: 158 PEERCRGALDPELCQGILPREVFDRWGA-ALCEAMVLAAPRAYCPFKDCSAMMLDDAGEA 216
Query: 239 XXXXXXXXCSCGHGLCWRCGEEAHRPVSCKTVAKWVEKNSSESETATWLLAHTKH---CP 295
SC C +C H V C K + + + + +A K CP
Sbjct: 217 VTESECP--SCRRLFCAQCAVPWHAGVDCAAYKKLGKGDRGKEDLLVVEMAKGKKWKRCP 274
Query: 296 KCRLPIEKNLGCMHMTCRPPCLHEFCWICLKPWH-GHAACS 335
KC+ +EK+ GC+H+TCR C EFC+ C W HA+CS
Sbjct: 275 KCKYFVEKSQGCLHITCR--CGFEFCYGCGGQWGVTHASCS 313
>Os08g0451900 Zinc finger, RING-type domain containing protein
Length = 228
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 84/192 (43%), Gaps = 13/192 (6%)
Query: 132 TCAICFDVFDT-----GGMRSAGCSHFYCVSCWRGYVRAAVGDGARCLSLRCPDPSCPAA 186
+C IC + GG GC+H +C +C G+VRA V G ++RCPDPSC A
Sbjct: 29 SCGICMEPMPPSEAHRGG--GGGCAHAFCRACLAGHVRAKVESGGGAGAVRCPDPSCGGA 86
Query: 187 VVRELVDAVADGEDRERFGWFALRSYVEESAGMRWCPGPGCSRAXXX-XXXXXXXXXXXX 245
+ EL G+ ER+ AL + A +CP PGCS
Sbjct: 87 LDPELCRGALPGDVFERW-CAALCEAMFAGARRTYCPYPGCSEMMVADADDEGCAGVTQS 145
Query: 246 XC-SCGHGLCWRCGEEAHRPVSCKTVAKWVEKNSSESETATWLLAHT---KHCPKCRLPI 301
C +C C RCG H VSC + E + A K CP+CR +
Sbjct: 146 ECQACRRLFCARCGVPWHAGVSCAEFGRLGEGERGREDLLLVQAARNGGWKRCPRCRFYV 205
Query: 302 EKNLGCMHMTCR 313
EK+ GC+H+TCR
Sbjct: 206 EKSHGCLHITCR 217
>Os09g0283600 Zinc finger, RING-type domain containing protein
Length = 331
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 95/223 (42%), Gaps = 17/223 (7%)
Query: 123 PARVNRRRLTCAICFDVFDTGGMR--SAGCSHFYCVSCWRGYVRAAVGDGARCLSLRCPD 180
P+ L C IC D S GC+H +C +C G++ A + G + CP+
Sbjct: 116 PSATTTSFLFCKICMDDVPASDAHRGSHGCAHAFCAACLAGHIAAKLHSGG---GVYCPE 172
Query: 181 PSCPAAVVRELVDAVADGEDRERFGWFALRSYVEESAGMR--WCPGPGCSRAXXXXXXXX 238
C +AV EL + ++ ER+ R+ V G R +CP C+
Sbjct: 173 DGCASAVDPELCQPILPEDNFERWCAALCRAMV---LGGRHVYCPFTDCAEIIADERGGD 229
Query: 239 XXXXXXXXCSCGHGLCWRCGEEAHRPVSCKTVAKWVEKNSSESETATWLLAHT---KHCP 295
+C C RCG H VSC + + E + A +A + CP
Sbjct: 230 SDGQPTECPACRRRFCERCGVAWHGGVSCGEYGELAVGDRGEGDLAVVEMAKGSRWRRCP 289
Query: 296 KCRLPIEKNLGCMHMTCRPPCLHEFCWICLKPWH--GHAACSR 336
+C+ +++ GC H+TCR C EFC+ C + W GH++C R
Sbjct: 290 RCKFFVDRYEGCSHITCR--CGLEFCYGCGQEWGPTGHSSCQR 330
>Os09g0420000 Zinc finger, RING-type domain containing protein
Length = 328
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 83/213 (38%), Gaps = 17/213 (7%)
Query: 125 RVNRRRLTCAICFD-VFDTGGMRSAGCSHFYCVSCWRGYVRAAVGDGARCLSLRCPDPSC 183
R +R TC IC D V + CSH +C SC GYV A V D ++ CPDP C
Sbjct: 110 RWRKRGFTCIICMDKVQASEEFLVNVCSHAFCKSCIGGYVAAKVSDNV--AAIGCPDPGC 167
Query: 184 PAAVVRELVDAVADGEDRERFGWFALRSYVEESAGMR---WCPGPGCSRAXXXXXXXXXX 240
V + D E FG +++ S E S G +CP CS
Sbjct: 168 EEGSVE--IGQCRDIVPPELFGRWSV-SLWESSMGETTKCYCPFKDCSAMLINDNGDGGD 224
Query: 241 XXXXXXCSCGH---GLCWRCGEEAHRPVSCKTVAKWVEKNSSESETATWLLAHTKH---C 294
C H C C H + CK K + + LA K C
Sbjct: 225 AEEIAETECPHCHRMFCASCRVPWHDGIDCKEFRKLGNDEKGKEDLMLKKLAGKKKWQRC 284
Query: 295 PKCRLPIEKNLGCMHMTCRPPCLHEFCWICLKP 327
P+CR+ +EK+ GC M CR C FC+ C P
Sbjct: 285 PQCRMYVEKSAGCTFMRCR--CGFFFCYNCAAP 315
>Os09g0419600 Zinc finger, RING-type domain containing protein
Length = 221
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 82/201 (40%), Gaps = 13/201 (6%)
Query: 133 CAICFDVFDTGGMR--SAGCSHFYCVSCWRGYVRAAVGDGARCLSLRCPDPSCPAAVVRE 190
C+IC + G ++ + C H +CV C YV A +G+ +RCPDP C V E
Sbjct: 15 CSICMETV-PGALKFSVSPCLHAFCVCCIGQYVAAKIGENT--ADVRCPDPGCGGGVEPE 71
Query: 191 LVDAVADGEDRERFGWFALRSYVEESAGMRWCPGPGCSRAXXXXXXXXXXXXXXXXC-SC 249
V E +R+G + + A CP CS C SC
Sbjct: 72 SCRGVVPSEVLDRWGLLLCEAAI--VARRLHCPFRDCSEPLLADADGEGGGVAEAECPSC 129
Query: 250 GHGLCWRCGEEAHRPVSCKTVAKWVEKNSSESETATWLLAHT---KHCPKCRLPIEKNLG 306
C RC H V C+ + E + LA + CP+CR+ +EK+ G
Sbjct: 130 HRLFCARCMVPWHDGVGCEEFQELGEDERGREDVMVRRLAGRERWQRCPQCRMYVEKSEG 189
Query: 307 CMHMTCRPPCLHEFCWICLKP 327
CM M CR C + FC+ C P
Sbjct: 190 CMFMKCR--CGYCFCYACASP 208
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.322 0.135 0.437
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 17,438,161
Number of extensions: 745526
Number of successful extensions: 2262
Number of sequences better than 1.0e-10: 19
Number of HSP's gapped: 2186
Number of HSP's successfully gapped: 19
Length of query: 525
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 420
Effective length of database: 11,553,331
Effective search space: 4852399020
Effective search space used: 4852399020
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 158 (65.5 bits)