Os09g0513800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to ARIADNE-like protein.
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Os09g0513800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to ARIADNE-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 54.3 | 0.346 | 10.3 | -1.19 | 0.727 | 0.669 | -0.324 | 0.261 | -0.127 | 7.37 | 7.838 | 643 | -- | -- |
| 54.34 | 0.343 | 10.3 | -1.23 | 0.726 | 0.671 | -0.383 | -- | -0.138 | 7.34 | 2.124 | 636 | -- | -- |
| 54.53 | 0.344 | 10.3 | -1.16 | 0.728 | 0.677 | -- | 0.496 | -0.117 | 7.38 | 5.659 | 636 | -- | -- |
| 54.73 | 0.345 | 10.3 | -1.24 | 0.732 | 0.689 | -- | -- | -0.141 | 7.36 | 2.08 | 623 | -- | -- |
| 71.27 | 0.393 | 10.3 | -1.11 | -- | 0.614 | -- | 1.03 | -0.0892 | -- | -22.42 | 5729 | -- | -- |
| 59.76 | 0.362 | 10.3 | -1.07 | 0.56 | -- | -0.501 | -- | -0.0375 | 7.2 | -- | -- | -- | -- |
| 60.43 | 0.364 | 10.3 | -1.08 | 0.559 | -- | -- | -- | -0.0363 | 7.26 | -- | -- | -- | -- |
| 71.51 | 0.394 | 10.4 | -1.29 | -- | 0.437 | -- | -- | -0.135 | -- | 21.69 | 5742 | -- | -- |
| 89.19 | 0.44 | 10.3 | -- | 0.592 | 0.285 | -- | -- | 0.104 | 7.36 | 32.7 | 673 | -- | -- |
| 76.99 | 0.41 | 10.3 | -1.07 | -- | -- | -- | -- | -0.0267 | -- | -- | -- | -- | -- |
| 91.07 | 0.446 | 10.3 | -- | 0.549 | -- | -- | -- | 0.0838 | 7.39 | -- | -- | -- | -- |
| 92.62 | 0.448 | 10.3 | -- | -- | -0.616 | -- | -- | 0.279 | -- | 8.199 | 46875 | -- | -- |
| 107.1 | 0.483 | 10.3 | -- | -- | -- | -- | -- | 0.0918 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 49.80 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 17 |
| 11 | 51.12 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 19 | 8 |
| 24 | 51.48 | wind | 5.0 | 270 | < th | dose independent | rect. | 1 | 8 |
| 26 | 51.51 | wind | 7.0 | 270 | < th | dose independent | rect. | 3 | 16 |
| 49 | 51.97 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 8 | 18 |
| 51 | 52.01 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 19 | 8 |
| 58 | 52.06 | temperature | 15.0 | 270 | > th | dose independent | rect. | 3 | 16 |
| 77 | 52.27 | wind | 5.0 | 90 | < th | dose independent | rect. | 3 | 8 |
| 93 | 52.39 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 5 | 22 |
| 99 | 52.47 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 13 | 9 |
| 101 | 52.48 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 14 | 7 |
| 125 | 52.60 | humidity | 80.0 | 270 | > th | dose independent | rect. | 19 | 8 |
| 128 | 52.62 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 16 |
| 130 | 52.62 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 16 |
| 134 | 52.65 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 8 | 19 |
| 147 | 52.72 | wind | 9.0 | 90 | < th | dose dependent | rect. | 3 | 17 |
| 156 | 52.75 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 14 | 18 |
| 162 | 52.76 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 17 | 10 |
| 177 | 52.84 | wind | 7.0 | 270 | < th | dose independent | rect. | 15 | 16 |
| 188 | 52.89 | wind | 9.0 | 90 | < th | dose dependent | rect. | 3 | 8 |
| 189 | 52.89 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 16 | 17 |
| 197 | 52.91 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 14 | 18 |
| 204 | 52.93 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 17 | 15 |
| 209 | 52.95 | temperature | 10.0 | 270 | > th | dose independent | rect. | 19 | 8 |
| 210 | 52.95 | temperature | 30.0 | 270 | < th | dose independent | rect. | 19 | 8 |
| 211 | 52.95 | humidity | 50.0 | 270 | > th | dose independent | rect. | 19 | 8 |
| 213 | 52.95 | radiation | 1.0 | 270 | < th | dose independent | rect. | 19 | 8 |
| 219 | 52.95 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 16 |
| 220 | 52.95 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 19 | 8 |
| 240 | 52.99 | wind | 9.0 | 270 | < th | dose independent | rect. | 19 | 8 |
| 244 | 53.00 | wind | 9.0 | 270 | < th | dose dependent | rect. | 1 | 8 |
| 266 | 53.04 | temperature | 30.0 | 270 | < th | dose independent | rect. | 8 | 17 |
| 278 | 53.08 | radiation | 1.0 | 270 | < th | dose independent | rect. | 8 | 19 |
| 286 | 53.10 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 15 | 16 |
| 289 | 53.10 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 15 | 16 |
| 296 | 53.12 | radiation | 1.0 | 270 | > th | dose independent | rect. | 17 | 13 |
| 302 | 53.14 | radiation | 1.0 | 270 | < th | dose independent | rect. | 17 | 10 |
| 312 | 53.16 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 12 | 5 |
| 319 | 53.18 | radiation | 1.0 | 270 | < th | dose independent | rect. | 5 | 22 |
| 325 | 53.19 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 12 | 5 |
| 326 | 53.19 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 9 | 8 |
| 333 | 53.20 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 8 |
| 335 | 53.20 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 8 |
| 338 | 53.21 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 8 | 17 |
| 341 | 53.22 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 9 | 8 |
| 355 | 53.23 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 14 | 7 |
| 359 | 53.24 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 20 | 17 |
| 374 | 53.27 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 11 | 16 |
| 378 | 53.28 | wind | 3.0 | 10 | < th | dose independent | rect. | 3 | 19 |
| 382 | 53.29 | atmosphere | 1000.0 | 30 | > th | dose dependent | rect. | 3 | 8 |
| 397 | 53.32 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 398 | 53.32 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 408 | 53.34 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 13 | 6 |
| 419 | 53.35 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 10 | 10 |
| 422 | 53.36 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 11 | 9 |
| 423 | 53.36 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 1 | 14 |
| 434 | 53.38 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 442 | 53.39 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 8 | 2 |
| 471 | 53.42 | radiation | 1.0 | 270 | < th | dose dependent | sin | 13 | NA |
| 473 | 53.42 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 8 | 7 |
| 477 | 53.43 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 2 | 1 |
| 484 | 53.44 | radiation | 40.0 | 270 | < th | dose independent | rect. | 15 | 16 |
| 485 | 53.44 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 2 | 1 |
| 486 | 53.44 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 11 | 12 |
| 490 | 53.44 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 13 | 22 |
| 492 | 53.45 | temperature | 10.0 | 720 | > th | dose dependent | sin | 3 | NA |
| 509 | 53.47 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 19 | 8 |
| 512 | 53.47 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 23 | 16 |
| 517 | 53.48 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 8 |
| 518 | 53.48 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 8 |
| 520 | 53.48 | temperature | 10.0 | 270 | > th | dose independent | rect. | 15 | 16 |
| 541 | 53.50 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 7 |
| 544 | 53.50 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 7 |
| 553 | 53.51 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 8 |
| 564 | 53.52 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 8 |
| 588 | 53.55 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 8 |
| 597 | 53.55 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 8 |
| 598 | 53.55 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 23 | 16 |
| 617 | 53.57 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 17 | 13 |
| 620 | 53.58 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 7 |
| 622 | 53.58 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 7 |
| 623 | 53.58 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 7 |
| 625 | 53.58 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 7 |
| 626 | 53.58 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 7 |
| 629 | 53.58 | radiation | 1.0 | 270 | > th | dose independent | rect. | 15 | 16 |
| 630 | 53.58 | temperature | 10.0 | 270 | > th | dose independent | rect. | 8 | 17 |
| 688 | 53.63 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 690 | 53.63 | wind | 7.0 | 10 | < th | dose independent | rect. | 16 | 17 |
| 691 | 53.63 | humidity | 50.0 | 270 | > th | dose independent | rect. | 8 | 17 |
| 704 | 53.64 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 705 | 53.64 | radiation | 40.0 | 270 | < th | dose independent | rect. | 1 | 7 |
| 761 | 53.67 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 16 | 6 |
| 805 | 53.70 | radiation | 1.0 | 270 | < th | dose independent | sin | 13 | NA |
| 814 | 53.70 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 15 | 4 |
| 825 | 53.71 | radiation | 1.0 | 270 | > th | dose independent | sin | 13 | NA |
| 827 | 53.71 | wind | 9.0 | 43200 | > th | dose independent | rect. | 11 | 12 |
| 844 | 53.72 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 8 | 4 |
| 845 | 53.72 | wind | 1.0 | 270 | > th | dose independent | rect. | 8 | 6 |
| 860 | 53.73 | radiation | 30.0 | 43200 | < th | dose independent | rect. | 17 | 6 |
| 872 | 53.73 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 8 | 18 |
| 876 | 53.74 | wind | 9.0 | 43200 | > th | dose independent | rect. | 13 | 6 |
| 877 | 53.74 | wind | 9.0 | 43200 | > th | dose independent | rect. | 11 | 8 |
| 909 | 53.76 | wind | 7.0 | 270 | < th | dose independent | rect. | 13 | 7 |
| 917 | 53.76 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 16 | 6 |