BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0513800 Os09g0513800|AK106673
(516 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os09g0513800 Similar to ARIADNE-like protein 1024 0.0
Os08g0540300 Zinc finger, RING-type domain containing protein 786 0.0
Os04g0492100 Similar to ARIADNE-like protein 582 e-166
Os09g0559000 Zinc finger, RING-type domain containing protein 414 e-116
Os09g0559100 Zinc finger, C6HC-type domain containing protein 352 3e-97
Os03g0233500 UBA-like domain containing protein 211 8e-55
AK110331 196 4e-50
Os03g0625800 Zinc finger, RING-type domain containing protein 184 1e-46
Os03g0626100 Zinc finger, RING-type domain containing protein 173 3e-43
Os03g0626000 155 5e-38
Os08g0451800 Zinc finger, RING-type domain containing protein 75 8e-14
Os04g0593800 Nucleic acid-binding, OB-fold domain containin... 75 8e-14
Os04g0593700 RWD domain containing protein 72 1e-12
Os09g0283600 Zinc finger, RING-type domain containing protein 71 2e-12
Os08g0451900 Zinc finger, RING-type domain containing protein 67 4e-11
>Os09g0513800 Similar to ARIADNE-like protein
Length = 516
Score = 1024 bits (2648), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/516 (95%), Positives = 493/516 (95%)
Query: 1 MISRVSAIFSVPRESACVLLRHYKWSISKLSDDWFADEENVRRSVGLPSNVVHVPDCPEL 60
MISRVSAIFSVPRESACVLLRHYKWSISKLSDDWFADEENVRRSVGLPSNVVHVPDCPEL
Sbjct: 1 MISRVSAIFSVPRESACVLLRHYKWSISKLSDDWFADEENVRRSVGLPSNVVHVPDCPEL 60
Query: 61 TCGICFEGCAANAMSCAGCSHFYCHECWEGYISAAVNDGPGCLVLQCPEPSCDAIVLEDM 120
TCGICFEGCAANAMSCAGCSHFYCHECWEGYISAAVNDGPGCLVLQCPEPSCDAIVLEDM
Sbjct: 61 TCGICFEGCAANAMSCAGCSHFYCHECWEGYISAAVNDGPGCLVLQCPEPSCDAIVLEDM 120
Query: 121 INSLTKDEDKVKYARFVLWSYIGVNNKIKWCPAPDCTCAVEFLGDGNYDVSCKCKFSFCW 180
INSLTKDEDKVKYARFVLWSYIGVNNKIKWCPAPDCTCAVEFLGDGNYDVSCKCKFSFCW
Sbjct: 121 INSLTKDEDKVKYARFVLWSYIGVNNKIKWCPAPDCTCAVEFLGDGNYDVSCKCKFSFCW 180
Query: 181 NCAEEAHRPVSCDTVSKWILKNSAESENMNWILAYSKPCPKCKRPIEKNQGCMHMTCTPP 240
NCAEEAHRPVSCDTVSKWILKNSAESENMNWILAYSKPCPKCKRPIEKNQGCMHMTCTPP
Sbjct: 181 NCAEEAHRPVSCDTVSKWILKNSAESENMNWILAYSKPCPKCKRPIEKNQGCMHMTCTPP 240
Query: 241 CKFEFCWLCLGAWSDHGDGTGGFYACNRYQSAKMGGMYDEAEARRERAKNSLERYMHYYE 300
CKFEFCWLCLGAWSDHGDGTGGFYACNRYQSAKMGGMYDEAEARRERAKNSLERYMHYYE
Sbjct: 241 CKFEFCWLCLGAWSDHGDGTGGFYACNRYQSAKMGGMYDEAEARRERAKNSLERYMHYYE 300
Query: 301 RWASNQTSRQKAQADLQKVENEDLTKLSDVVGIPETQLKFIPEAWSQIIECRRVLKWTYA 360
RWASNQTSRQKAQADLQKVENEDLTKLSDVVGIPETQLKFIPEAWSQIIECRRVLKWTYA
Sbjct: 301 RWASNQTSRQKAQADLQKVENEDLTKLSDVVGIPETQLKFIPEAWSQIIECRRVLKWTYA 360
Query: 361 YGYYLHNKAKSDFFVYLQGEAESGLERLHKCAEKDMREFLPTADSTQPSLSLQDFGEFRV 420
YGYYLHNKAKSDFFVYLQGEAESGLERLHKCAEKDMREFLPTADSTQPSLSLQDFGEFRV
Sbjct: 361 YGYYLHNKAKSDFFVYLQGEAESGLERLHKCAEKDMREFLPTADSTQPSLSLQDFGEFRV 420
Query: 421 KLSGLTSVTRNYFENLVQTLEAGLQDVRAXXXXXXXXXXXXXXXXXXXXXXXGRSKVART 480
KLSGLTSVTRNYFENLVQTLEAGLQDVRA GRSKVART
Sbjct: 421 KLSGLTSVTRNYFENLVQTLEAGLQDVRATDQSASVSTSSSKKPPTNTKGKSGRSKVART 480
Query: 481 SQERSGDRWPCDRCTFINPSSTNSCNMCGRNKPRRR 516
SQERSGDRWPCDRCTFINPSSTNSCNMCGRNKPRRR
Sbjct: 481 SQERSGDRWPCDRCTFINPSSTNSCNMCGRNKPRRR 516
>Os08g0540300 Zinc finger, RING-type domain containing protein
Length = 607
Score = 786 bits (2030), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/512 (70%), Positives = 427/512 (83%), Gaps = 1/512 (0%)
Query: 2 ISRVSAIFSVPRESACVLLRHYKWSISKLSDDWFADEENVRRSVGLPSNVVHVPDCPELT 61
I +VSA+ S+ RE ACVLL HYKW+ISKLSD+WFADEE VR VGL N + +P+ +LT
Sbjct: 95 IGKVSAVLSIRREEACVLLHHYKWNISKLSDEWFADEEKVRDIVGLLLNGIDLPNSRKLT 154
Query: 62 CGICFEGCAANAMSCAGCSHFYCHECWEGYISAAVNDGPGCLVLQCPEPSCDAIVLEDMI 121
CGICFEG +++ MS A C HFYCHECWEGYISAA++DGPGCL L+CP+PSC A+VL++MI
Sbjct: 155 CGICFEGYSSDVMSSADCDHFYCHECWEGYISAAISDGPGCLSLRCPDPSCGAMVLQNMI 214
Query: 122 NSLTKDEDKVKYARFVLWSYIGVNNKIKWCPAPDCTCAVEFLGDGNYDVSCKCKFSFCWN 181
N L KD+DKV+YARF+L +Y+ + K KWCPAPDCTCAVEF+ DGNYDVSC CKFSFCWN
Sbjct: 215 NKLAKDDDKVRYARFILRAYVEDSKKTKWCPAPDCTCAVEFVSDGNYDVSCNCKFSFCWN 274
Query: 182 CAEEAHRPVSCDTVSKWILKNSAESENMNWILAYSKPCPKCKRPIEKNQGCMHMTCTPPC 241
C EEAHRPV+C+TVS+WILKNSAESENMNWILA SKPCPKCKRPIEKNQGCMHMTCTPPC
Sbjct: 275 CTEEAHRPVNCETVSRWILKNSAESENMNWILANSKPCPKCKRPIEKNQGCMHMTCTPPC 334
Query: 242 KFEFCWLCLGAWSDHGDGTGGFYACNRYQSAKMGGMYDEAEARRERAKNSLERYMHYYER 301
KFEFCWLCLG+W++HG+ TGGFYACNRY+SAK G+YDE EARRERAKNSLERYMHYYER
Sbjct: 335 KFEFCWLCLGSWAEHGERTGGFYACNRYESAKKEGVYDETEARRERAKNSLERYMHYYER 394
Query: 302 WASNQTSRQKAQADLQKVENEDLTKLSDVVGIPETQLKFIPEAWSQIIECRRVLKWTYAY 361
WASNQTSRQKAQADLQK E E L KL+DV GIPETQLKFI EAWSQIIECRRVLKWTYAY
Sbjct: 395 WASNQTSRQKAQADLQKAEKEQLAKLTDVFGIPETQLKFIIEAWSQIIECRRVLKWTYAY 454
Query: 362 GYYLHNKAKSDFFVYLQGEAESGLERLHKCAEKDMREFLPT-ADSTQPSLSLQDFGEFRV 420
GYYL +K KS+FF YLQGEAESGLERLH+CAEKD++ FL +D+T+P+ S+ +FG+FRV
Sbjct: 455 GYYLDDKVKSEFFEYLQGEAESGLERLHQCAEKDLQSFLTVRSDNTEPAPSIAEFGDFRV 514
Query: 421 KLSGLTSVTRNYFENLVQTLEAGLQDVRAXXXXXXXXXXXXXXXXXXXXXXXGRSKVART 480
KL+GLTSVTRNYFENLVQ LEAGL+DV + + ++ RT
Sbjct: 515 KLAGLTSVTRNYFENLVQALEAGLEDVHSTAQGTTSSNATNIPSKKAVTKGKTKKQLPRT 574
Query: 481 SQERSGDRWPCDRCTFINPSSTNSCNMCGRNK 512
S + S + WPC+RCTFINPSS ++C++C +++
Sbjct: 575 SSDNSDEGWPCERCTFINPSSVDACSVCDKHR 606
>Os04g0492100 Similar to ARIADNE-like protein
Length = 464
Score = 582 bits (1500), Expect = e-166, Method: Compositional matrix adjust.
Identities = 286/465 (61%), Positives = 336/465 (72%), Gaps = 16/465 (3%)
Query: 54 VPDCPELTCGICFEGCAANAMSCAGCSHFYCHECWEGYISAAVNDGPGCLVLQCPEPSCD 113
+P+ ELTCGICFE C +MS A C H +C CW GYIS ++NDGPGCL+L+CP+PSC
Sbjct: 1 MPNDRELTCGICFENCPRTSMSAAACGHPFCSACWRGYISTSINDGPGCLMLRCPDPSCT 60
Query: 114 AIVLEDMINSLTKDEDKVKYARFVLWSYIGVNNKIKWCPAPDCTCAVEF-LGDGNYDVSC 172
A V +DMINSL DED+ KY R++ SYI N K KWCPAP C AVEF +G G+YDV+C
Sbjct: 61 AAVGQDMINSLADDEDREKYGRYLRRSYIEDNRKTKWCPAPGCEYAVEFVMGSGSYDVNC 120
Query: 173 KCKFSFCWNCAEEAHRPVSCDTVSKWILKNSAESENMNWILAYSKPCPKCKRPIEKNQGC 232
C + FCWNC EEAHRPV C TVSKWILKNSAESENMNWILA SKPCPKCKRPIEKNQGC
Sbjct: 121 NCSYGFCWNCTEEAHRPVDCATVSKWILKNSAESENMNWILANSKPCPKCKRPIEKNQGC 180
Query: 233 MHMTCTPPCKFEFCWLCLGAWSDHGDGTGGFYACNRYQSAKMGGMYDEAEARRERAKNSL 292
MH+TCTPPCKFEFCWLCLG WS+HG+ TGGFYACNRY++A+ G YDE+E RRE AKNSL
Sbjct: 181 MHITCTPPCKFEFCWLCLGPWSEHGERTGGFYACNRYEAARQEGAYDESERRREMAKNSL 240
Query: 293 ERYMHYYERWASNQTSRQKAQADLQKVENEDLTKLSDVVGIPETQLKFIPEAWSQIIECR 352
ERY HYYERWA+NQ+SRQKA DL ++N+ L KLSD+ PE+QLKFI EAW QI+ECR
Sbjct: 241 ERYTHYYERWAANQSSRQKALGDLLSLQNDKLEKLSDIQSQPESQLKFIIEAWLQIVECR 300
Query: 353 RVLKWTYAYGYYL--HNKAKSDFFVYLQGEAESGLERLHKCAEKDMREFLPTADSTQPSL 410
RVLKWTYAYG+YL H AK FF YLQGEAESGLERLH+CAEK+++ +L ++ PS
Sbjct: 301 RVLKWTYAYGFYLPEHEHAKRQFFEYLQGEAESGLERLHQCAEKELQVYL---EAESPS- 356
Query: 411 SLQDFGEFRVKLSGLTSVTRNYFENLVQTLEAGLQDVRAXXXXXXXXXXXXXXXXXXXXX 470
+DF +FR KL+GLTSVTRNYFENLV+ LE GL DV
Sbjct: 357 --KDFNDFRTKLAGLTSVTRNYFENLVRALETGLNDVGPSTSHGTCSKSATSKSLGSKSK 414
Query: 471 XXGRSKVARTSQERSGDR-------WPCDRCTFINPSSTNSCNMC 508
+ +S+ R W CD+CT+ NP S +C C
Sbjct: 415 SSKSRASSTSSKTGGSSRGVDESNIWTCDQCTYANPRSARNCQAC 459
>Os09g0559000 Zinc finger, RING-type domain containing protein
Length = 525
Score = 414 bits (1064), Expect = e-116, Method: Compositional matrix adjust.
Identities = 204/464 (43%), Positives = 280/464 (60%), Gaps = 27/464 (5%)
Query: 2 ISRVSAIFSVPRESACVLLRHYKWSISKLSDDWFADEENVRRSVGLPSNVVHVPDCP--- 58
I++V + S+ +A VLLR Y+W L ++WF DE +R + GL + P
Sbjct: 67 IAKVCEVLSLSPGAAAVLLRLYRWRAVLLQEEWFLDERRIRDAAGLLPADGGGGEVPARV 126
Query: 59 ---ELTCGICFEGCAANAMSCAGCSHFYCHECWEGYISAAVNDGPGCLVLQCPEPSCDAI 115
LTC ICF+ M AGCSHFYC CW GY+ AAV DG CL L+CP+PSC A
Sbjct: 127 NRRRLTCAICFDVFDTGGMRSAGCSHFYCVSCWRGYVRAAVGDGARCLSLRCPDPSCPAA 186
Query: 116 VLEDMINSLTKDEDKVKYARFVLWSYIGVNNKIKWCPAPDCTCAVEFLGDGN----YDVS 171
V+ ++++++ ED+ ++ F L SY+ + ++WCP P C+ AVEF+G G+ +V
Sbjct: 187 VVRELVDAVADGEDRERFGWFALRSYVEESAGMRWCPGPGCSRAVEFVGGGDGEESSEVF 246
Query: 172 CKCKFSFCWNCAEEAHRPVSCDTVSKWILKNSAESENMNWILAYSKPCPKCKRPIEKNQG 231
C C CW C EEAHRPVSC TV+KW+ KNS+ESE W+LA++K CPKC+ PIEKN G
Sbjct: 247 CSCGHGLCWRCGEEAHRPVSCKTVAKWVEKNSSESETATWLLAHTKHCPKCRLPIEKNLG 306
Query: 232 CMHMTCTPPCKFEFCWLCLGAWSDHGDGTGGFYACNRYQS-----AKMGGMYDEAEARRE 286
CMHMTC PPC EFCW+CL W H AC+RYQ A G D + RR
Sbjct: 307 CMHMTCRPPCLHEFCWICLKPWHGHA-------ACSRYQPNGTVVALAGANAD--DERRR 357
Query: 287 RAKNSLERYMHYYERWASNQTSRQKAQADLQKVENEDLTKLSDVVGIPETQLKFIPEAWS 346
+AK SL+RY+++YERW +N S + A D++ +E +L ++ G+P T++ F+ EA+
Sbjct: 358 QAKASLDRYLYHYERWDANLKSLRVALRDMESLERSELEAMASAAGVPATEMGFVTEAYE 417
Query: 347 QIIECRRVLKWTYAYGYYL---HNKAKSDFFVYLQGEAESGLERLHKCAEKDMREFLPTA 403
Q+ E RRVL W +AYGYYL + K F YLQ +A + LERLH CAE++ RE
Sbjct: 418 QVGEGRRVLGWAHAYGYYLDPDRDFTKRQLFEYLQEDANASLERLHGCAERERRELFAAG 477
Query: 404 DSTQPSLSLQDFGEFRVKLSGLTSVTRNYFENLVQTLEAGLQDV 447
+ ++ + +R KL+GLT VTR YF NLV+ E L +V
Sbjct: 478 ADDKAAVDFDKYRAYREKLAGLTRVTRQYFGNLVKAFETDLAEV 521
>Os09g0559100 Zinc finger, C6HC-type domain containing protein
Length = 579
Score = 352 bits (904), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 200/478 (41%), Positives = 266/478 (55%), Gaps = 55/478 (11%)
Query: 3 SRVSAIFSVPRESACVLLRHYKWSISKLSDDWFADEENVRRSVGLPSNVVHVP-DCPELT 61
+ V +F++P A VLLRHYKWS+ +L D F D + + G+ V + L
Sbjct: 88 ANVGELFAIPPGFAAVLLRHYKWSLVELQDRLFCDGDRAGAATGVALGGAPVSRNAHPLV 147
Query: 62 CGICFEGCAANAMSCAGCSHFYCHECWEGYISAAVNDGPGCLVLQCPEPSCDAIVLEDMI 121
C ICF+ A M AGCSHFYC CW GY+ AA +
Sbjct: 148 CAICFDEHPAGEMRSAGCSHFYCVGCWRGYVHAAPV-------------------VPVPG 188
Query: 122 NSLTKDEDKVKYARFVLWSYIGVNNKIKWCPAPDCTCAVEFLGDGNY-----DVSCKCKF 176
S+ + +YA F+L SY+ +IKWCP P CT A+EF+G G DV C+
Sbjct: 189 PSVLRRRGAARYATFLLRSYVEEGTRIKWCPGPGCTLAIEFVGGGGGEEKQDDVECRHGH 248
Query: 177 SFCWNCAEEAHRPVSCDTVSKWILKNSAESENMNWILAYSKPCPKCKRPIEKNQGCMHMT 236
FC+ C EEAHRPVSC+TV W KN+ +SE +W+LA +K CPKC+ PIEKN+GCMHMT
Sbjct: 249 GFCFRCGEEAHRPVSCETVYAWSEKNAMKSETASWVLANTKHCPKCRLPIEKNRGCMHMT 308
Query: 237 CTPPCKFEFCWLCLGAWSDHGDGTGGFYACNRYQSAKMGGMYDEAEARRERAKNSLERYM 296
C PPC EFCWLCL WSDH + +Y CN Y +AK G + + RRE+ SL+RYM
Sbjct: 309 CRPPCLHEFCWLCLSPWSDH--RSSEYYNCNVYDAAKANGEASDDKRRREQGMASLDRYM 366
Query: 297 HYYERWASNQTSRQKAQADLQKVENEDLTKLSDVVGIPETQLKFIPEAWSQIIECRRVLK 356
H+YERWA++ +RQ A D+ + + KLS V +P T+L F+ EA+ QI ECRR+L+
Sbjct: 367 HFYERWAAHGKARQSAVDDMAGL-DACAEKLSAAVAMPVTELCFLAEAYQQIAECRRLLR 425
Query: 357 WTYAYGYYL------HNKAKSDFFVYLQGEAESGLERLHKCAEKDMREFLPTADST---- 406
WTYAYGYY ++ + QGEAE LE+LH CAE + E L + T
Sbjct: 426 WTYAYGYYHLGTGLDGDEERRTMVECAQGEAERQLEKLHDCAEHEREELLAEVERTIKLN 485
Query: 407 ---------QPSLSLQD-FGE-------FRVKLSGLTSVTRNYFENLVQTLEAGLQDV 447
+ ++D GE +R KLSGLT V + +F NLV+T + GL +V
Sbjct: 486 AILKDNDGEESKKKMEDKAGEMVDMVVAYRQKLSGLTGVCKIFFRNLVKTFQDGLLEV 543
>Os03g0233500 UBA-like domain containing protein
Length = 612
Score = 211 bits (538), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 133/430 (30%), Positives = 214/430 (49%), Gaps = 55/430 (12%)
Query: 2 ISRVSAIFSVPRESACVLLRHYKWSISKLSDDWFADEENVRR---SVGLPSNVVHVPDCP 58
+ +V + + A LL HY+W + ++ + D++ R G+P + P P
Sbjct: 73 LRKVMELLGLREHHARTLLIHYRWDVERIFE--LLDQKGRDRLFSEAGIPLQPANNPGSP 130
Query: 59 ---ELTCGICFEGCAANAMSCAGCSHFYCHECWEGYISAAVNDGPG----CLVLQCPEPS 111
E+TC +C++ + S C H YC+ECW GY +N+G C+ L+C
Sbjct: 131 SSTEVTCNVCYDDVPLSDASKMDCGHNYCNECWTGYFIVKINEGQSRRIKCMALKC-NTI 189
Query: 112 CDAIVLEDMINSLTKDEDKVKYARFVLWSYIGVNNKIKWCPA-PDCTCAVEFLGDGNYDV 170
CD ++ ++N+ D + ++ RF+L SYI N+ +KWCP+ P C A+ GD + +V
Sbjct: 190 CDEAIVRKLVNAKRPDIAE-RFERFLLESYIEDNDTVKWCPSTPHCGNAIRVKGDIHCEV 248
Query: 171 SCKCKFSFCWNCAEEAHRPVSCDTVSKWILKNSAESENMNWILAYSKPCPKCKRPIEKNQ 230
C C FC+NC+ EAH P SC WI K ESE +NWI +KPCPKC +P+EKN
Sbjct: 249 ECTCGRQFCFNCSSEAHSPCSCVMWELWIKKCRDESETVNWITVNTKPCPKCHKPVEKNG 308
Query: 231 GCMHMTCTPPCKFEFCWLCLGAWS-DHGDGTGGFYACNRYQSAKMGGMYDEAEARRERAK 289
GC + C C FCWLC GA DH + ++C R+ ++ + E+A+
Sbjct: 309 GCNLVACI--CGQAFCWLCGGATGRDHTWSSISGHSCGRFT--------EDQSKKTEQAR 358
Query: 290 NSLERYMHYYERWASNQTS-RQKA------QADLQKVENEDLTKLSDVVGIPETQLKFIP 342
+L RYMHY+ R+ ++ S +Q+A Q + EN+D +K+ D ++
Sbjct: 359 RNLYRYMHYHNRYKAHTDSLKQEAKLKGDIQGKISISENKD-SKIKD--------YSWVI 409
Query: 343 EAWSQIIECRRVLKWTYAYGYYL-------------HNKAKSDFFVYLQGEAESGLERLH 389
+++ RRVL ++Y + +Y+ + K + F Q + E +ERL
Sbjct: 410 NGLNRLFRSRRVLSYSYPFAFYMFGDEIFKDEMTSDERELKQNLFEDQQQQLEFNVERLS 469
Query: 390 KCAEKDMREF 399
E+D + F
Sbjct: 470 GFLERDFQNF 479
>AK110331
Length = 674
Score = 196 bits (497), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 129/413 (31%), Positives = 194/413 (46%), Gaps = 37/413 (8%)
Query: 1 MISRVSAIFSVPRESACVLLRHYKWSISKLSDDWFADEENVRRSVGLPS---NVVHVPDC 57
MI V++ SV +A LLR +KW L W AD V + + + V+ P
Sbjct: 262 MIEGVASKLSVTISAAGQLLRAHKWDDEALLKAWSADHAAVAKKANVTAILRQVMSAPAD 321
Query: 58 PEL--TCGICFEGCAANAMSCAGCSHFYCHECWEGYISAAVNDGPG----CLVLQCPEPS 111
PE +CG+CF+ C H +C CW+ Y+ ++V+ G CL CP
Sbjct: 322 PEKLCSCGVCFDDVKEGLTFAMKCGHRFCIPCWKDYLKSSVDSGASAGGNCLSSTCPGFK 381
Query: 112 CDAIVLEDMINSLTKDEDKVKYARFVLWSYIGVNNKIKWCPAPDCTCAVEFLGDGNYDVS 171
C ++ E + L + KY L S++ N I WCP C + F V
Sbjct: 382 CKELLGEQIYEMLCDEASFKKYRDVQLLSFVDDNESITWCPGKGCGNVIAF-SKRKKTVY 440
Query: 172 CKCKFSFCWNCAEEAHRPVSCDTVSKWILKNSAESENMN--WILAYSKPCPKCKRPIEKN 229
C C FC+ C EAH P +C + W+ ++ S+N++ ++L +KPCP C ++K+
Sbjct: 441 CTCGQRFCFKCKAEAHAPTTCKEAADWLARDKG-SQNLDSKFLLEETKPCPHCGVRVKKD 499
Query: 230 QGCMHMTCTPPCKFEFCWLCLGAWSDHGDGTGGFYACNR--YQSAKMGGMYDEAEARRER 287
GCM+M+CT CK +CW C SDH + CNR Y+ K G
Sbjct: 500 GGCMYMSCTQ-CKKAWCWQC--GKSDHH-----VWECNRPPYEVGKPGD----------- 540
Query: 288 AKNSLERYMHYYERWASNQTSRQKAQADLQKVENEDLTKLSDVVGIPETQLKFIPEAWSQ 347
K+ + RY+ Y+ER+ ++ S + AD Q+ D K G+ +++F+ A
Sbjct: 541 -KDDVNRYLFYFERYFNHGQSLK--IADKQRQATMDKMKSLVKEGLHFQRVEFLLRATEL 597
Query: 348 IIECRRVLKWTYAYGYYLHNKAKSDFFVYLQGEAESGLERLHKCAEKDMREFL 400
++ECRRVLKWTY Y +KA F Y Q E E E+L++ E + E L
Sbjct: 598 VLECRRVLKWTYVKAYNFKSKADRTLFEYRQSELEKYTEKLNQLTEGSLEELL 650
>Os03g0625800 Zinc finger, RING-type domain containing protein
Length = 540
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 116/377 (30%), Positives = 190/377 (50%), Gaps = 27/377 (7%)
Query: 2 ISRVSAIFSVPRESACVLLRHYKWSISKLSDDWFADEENVRRSVG-----LPSNVVHVPD 56
+S V + ++ + A LL H++W + + D D + R + LP N +
Sbjct: 69 LSMVMNLLNIKQHLARTLLIHHRWKMHCIYD--HLDRKGRDRMLSEACIILPKNSMSAAS 126
Query: 57 CPELTCGICFEGCAANAMSCAGCSHFYCHECWEGYISAAVNDGPGCLVLQCPEPSCDAIV 116
+TC +CFE + +S C H +C++CW + A++N G ++C E C AI
Sbjct: 127 STSVTCNVCFEDFSMTDVSTMDCGHCFCNDCWTEHFFASINTGNK--QIRCMEVKCKAIC 184
Query: 117 LEDMINSLTKDEDKVKYARF---VLWSYIGVNNKIKWCP-APDCTCAVEF-LGDGNYDVS 171
ED++ L + RF +L SY+ N+ +KWCP AP C A++ G+ +V+
Sbjct: 185 DEDIVRRLLSLKYPAASKRFDLLLLESYLEDNDSVKWCPSAPHCGRAIQVGTGERYCEVA 244
Query: 172 CKCKFSFCWNCAEEAHRPVSCDTVSKWILKNSAESENMNWILAYSKPCPKCKRPIEKNQG 231
C C SFC+NCA + H P C KW K +S+++ WILA +K CPKC +PIEKN G
Sbjct: 245 CPCGVSFCFNCAGQVHSPCPCAIWEKWKAKGHGDSDSVKWILANTKSCPKCSKPIEKNGG 304
Query: 232 CMHMTCTPPCKFEFCWLCLG-AWSDHGDGTGGFYACNRYQSAKMGGMYDEAEARRERAKN 290
C + C C CWLC G +H + ++CNRY+ +E + + ++
Sbjct: 305 CNLVHCK--CGQCLCWLCGGPTGREHTWDSISGHSCNRYK--------EENGDKVDTSRQ 354
Query: 291 SLERYMHYYERWASNQTSRQKAQADLQKVENEDLTKLSDVVGIPETQL--KFIPEAWSQI 348
++RY HY++R+ + S + Q DL E + KL + P+ ++ A+ +
Sbjct: 355 QMQRYTHYWDRYNIHAGSYKVEQKDLGPAVEEQVKKLESNLTGPKMNWDGSWLAMAYQSL 414
Query: 349 IECRRVLKWTYAYGYYL 365
+ R+VL +YA+ YY+
Sbjct: 415 LASRQVLSRSYAFAYYM 431
>Os03g0626100 Zinc finger, RING-type domain containing protein
Length = 570
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 127/428 (29%), Positives = 196/428 (45%), Gaps = 51/428 (11%)
Query: 2 ISRVSAIFSVPRESACVLLRHYKWSISKLSD--DWFADEENVRRS--VGLPSNV------ 51
+S V + +V R +A LL H++W + ++ D D + +R + V LP
Sbjct: 72 LSMVMNLVNVERHNARALLAHHRWKMERIYDRLDMMGRDALLRDAGVVVLPEKSSSSGSS 131
Query: 52 -----VHVPDCPELTCGICFEGCAANAMSCAGCSHFYCHECWEGYISAAVNDGPGCLVLQ 106
+ P +TC +CFE ++S C H +C++CW Y +AAV+DG ++
Sbjct: 132 MAMAKTNPPGSVAVTCNVCFEEYPLGSVSAMDCGHCFCNDCWTEYFAAAVSDGSK--QMR 189
Query: 107 CPEPSCDAIVLEDMINSLTKDEDKVKYARF---VLWSYIGVNNKIKWCP-APDCTCAVEF 162
C E C AI E ++ L + AR +L + + ++ ++WCP AP C A+
Sbjct: 190 CMEVKCTAICDEAVVRLLLHGKHPGAAARLDRRLLEACVEASDAVRWCPSAPHCGRAIRV 249
Query: 163 LGDGN-----YDVSCKCKFSFCWNCAEEAHRPVSCDTVSKW-ILKNSAESENMNWILAYS 216
G G +VSC C FC+ C AH P C KW ++ E +N+ WI+A +
Sbjct: 250 DGGGGGEERYAEVSCPCGAVFCFRCGGGAHSPCPCPMWDKWGAMRGGGEVDNLKWIVANT 309
Query: 217 KPCPKCKRPIEKNQGCMHMTCTPPCKFEFCWLCLGAWSDHGDGTGGFYACNRYQSAKMGG 276
K CPKC +PIEKN GC H+TCT C C+ C A GT + CNRY+ GG
Sbjct: 310 KSCPKCSKPIEKNGGCNHVTCT--CGQHLCYACGAA-----TGTLYMHICNRYKEEGGGG 362
Query: 277 MYDEAEARRERAKNSLERYMHYYERWASNQTSRQKAQADLQKVENEDLTKLSDVVGIP-- 334
R + R+MHYYER+ + S ++ Q L + +L +P
Sbjct: 363 GVKVEMTAGGRQR---LRFMHYYERFEIHTESYKEEQGKLGPAIDALARRLEADATLPWS 419
Query: 335 -ETQLKFIPEAWSQIIECRRVLKWTYAYGYYL-----------HNKAKSDFFVYLQGEAE 382
++ A +++ CR+VL +Y YY+ A + F LQG+ E
Sbjct: 420 GTRDARWPSAAHRRLLRCRQVLPRSYVLAYYMFGGGAATRREREEAAAQNRFEDLQGQLE 479
Query: 383 SGLERLHK 390
+E L +
Sbjct: 480 HHVEVLSR 487
>Os03g0626000
Length = 565
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 121/396 (30%), Positives = 179/396 (45%), Gaps = 44/396 (11%)
Query: 2 ISRVSAIFSVPRESACVLLRHYKWSISKLSDDW------------------FADEENVRR 43
+S V + + + A LL H++W + + D + A+E+N
Sbjct: 64 LSMVMNLLYIKQHQARALLIHHRWKMESILDHFDRKGRDRMLRETGVVIQQQAEEKNGGG 123
Query: 44 SVGLPSNVVHVPDCPELTCGICFEGCAANAMSCAGCSHFYCHECWEGYISAAVNDGPGCL 103
S +TC +CFE +++A+S C H +C++CW + A VN G
Sbjct: 124 MAMAASPSPPPRPRSSVTCYVCFEDVSSDAVSTMDCGHCFCNDCWTEHFFACVNGGQK-- 181
Query: 104 VLQCPEPSCDAIVLEDMINSLTKDEDKVKYARF---VLWSYIGVNNKIKWCP-APDCTCA 159
++C C A+ ED+ L R +L SY+ N +WCP AP C A
Sbjct: 182 QIRCMAVGCAAVCDEDVAQRLLGGRYPGAARRLRGALLASYVEDNAAARWCPSAPHCGRA 241
Query: 160 VEFLGDGNY---DVSCKCKFSFCWNCAEEAHRPVSCDTVSKWILKNSAESENMNWILAYS 216
V G G +VSC C SFC+ CA AH P C +W K ES N++WILA +
Sbjct: 242 VRVDGGGGRWCCEVSCPCGASFCFGCAAPAHSPCPCAMWERWEAKCRGESMNVDWILANT 301
Query: 217 KPCPKCKRPIEKNQGCMHMTCTPPCKFEFCWLCLGAWS-DHGDGTGGFYACNRYQSAKMG 275
K CPKC +PIEKN GC H+ C C CWLC A H + ++CNRY
Sbjct: 302 KSCPKCSKPIEKNGGCNHVRCK--CGQCLCWLCGAATGLAHNWTSIDGHSCNRYD----- 354
Query: 276 GMYDEAEARR-ERAKNSLERYMHYYERWASNQTSRQKAQADLQ---KVENEDLTKLSDVV 331
D AE R+ + A+ + RY HYYER+ ++ SR+ L + L + D
Sbjct: 355 ---DAAEKRKVDGARRKVLRYAHYYERYKAHGDSRRAEAEKLGPAIEARARRLREDPDPA 411
Query: 332 GIPET--QLKFIPEAWSQIIECRRVLKWTYAYGYYL 365
P + + + A ++ R VL +YA+ Y++
Sbjct: 412 TAPASGDAAEALAAAHRALLASRDVLSRSYAFAYHM 447
>Os08g0451800 Zinc finger, RING-type domain containing protein
Length = 315
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 91/199 (45%), Gaps = 12/199 (6%)
Query: 62 CGICFEGCAANAMSCA--GCSHFYCHECWEGYISAAVNDGPGCLVLQCPEPSCDAIVLED 119
C IC + +A A GC H +C C GY+ A + + ++CPE C + +
Sbjct: 112 CKICMDAVPPSAAHRASRGCDHAFCAACLAGYVGAKIQERIA--DVRCPEERCRGALDPE 169
Query: 120 MINSLTKDEDKVKYARFVLWSYIGVNNKIKWCPAPDCTCA-VEFLGDGNYDVSC-KCKFS 177
+ + E ++ + + + + +CP DC+ ++ G+ + C C+
Sbjct: 170 LCQGILPREVFDRWGAALCEAMVLAAPR-AYCPFKDCSAMMLDDAGEAVTESECPSCRRL 228
Query: 178 FCWNCAEEAHRPVSCDTVSKWILKNSAESENMNWILAYSKP---CPKCKRPIEKNQGCMH 234
FC CA H V C K + + + + +A K CPKCK +EK+QGC+H
Sbjct: 229 FCAQCAVPWHAGVDCAAYKKLGKGDRGKEDLLVVEMAKGKKWKRCPKCKYFVEKSQGCLH 288
Query: 235 MTCTPPCKFEFCWLCLGAW 253
+TC C FEFC+ C G W
Sbjct: 289 ITCR--CGFEFCYGCGGQW 305
>Os04g0593800 Nucleic acid-binding, OB-fold domain containing protein
Length = 305
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 82/201 (40%), Gaps = 28/201 (13%)
Query: 81 HFYCHECWEGYISAAVNDGPGCLVLQCPEPSCDAIVLEDMINSLTKDEDKVKYARFVLWS 140
H++C C E Y V +G L L CP C I+ ++ L D D ++ R +L
Sbjct: 8 HYFCRRCMETYSRMHVTEG-TVLKLLCPNDKCGGIIPPSLLKRLLGDTDFERWERLILQK 66
Query: 141 YIGVNNKIKWCPAPDCTCAVEFLGDGNYDVSC-KCKFSFCWNCAEEAHRPVSCDTVSKWI 199
+ + + +CP C L D + C KC FSFC C + H C T+ + +
Sbjct: 67 TLDSMSDLAYCP----RCGAACLEDEENNAQCPKCFFSFCARCRDRRHIGEKCMTIEEKL 122
Query: 200 --------------------LKNSAESENMNWILAYSKPCPKCKRPIEKNQGCMHMTCTP 239
+ S E ++ +L S CP C I + GC HM C+
Sbjct: 123 NSLQDRTVVPFLSKDSFASKMNLSNEISSIKEVLRSSVRCPHCGTAISRVSGCNHMLCS- 181
Query: 240 PCKFEFCWLCLGAWSDHGDGT 260
C+ FC+ C G +HG +
Sbjct: 182 NCRQSFCYGC-GKAENHGHSS 201
>Os04g0593700 RWD domain containing protein
Length = 461
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 82/209 (39%), Gaps = 27/209 (12%)
Query: 62 CGICFEGCAANAMSCAGCSHFYCHECWEGYISAAVNDGPGCLVLQCPEPSCDAIVLEDMI 121
C ICF A C H++C C E Y V +G L L CP C I+ ++
Sbjct: 237 CMICFTERAGIDFIKLPCGHYFCQRCMETYSRMHVAEGT-VLKLLCPNDKCGDIIPPSLL 295
Query: 122 NSLTKDEDKVKYARFVLWSYIGVNNKIKWCPAPDCTCAVEFLGDGNYDVSC-KCKFSFCW 180
+ D+D ++ R L + + + +CP C L D + C KC FSFC
Sbjct: 296 KRMLGDKDFERWERLTLQKTLDSMSDVAYCP----RCVTACLEDEENNAQCSKCFFSFCT 351
Query: 181 NCAEEAHRPVSCDTVSKWIL----KNSA----------------ESENMNWILAYSKPCP 220
C H C + + +L +N E ++ +L S CP
Sbjct: 352 RCRYLRHIGERCISPEEKLLSLQDRNKVRQLSKGNFARRINLANEISSIKEVLRSSVLCP 411
Query: 221 KCKRPIEKNQGCMHMTCTPPCKFEFCWLC 249
C I + GC HM C+ C+ FC+ C
Sbjct: 412 HCGTAISRVSGCDHMLCS-NCRQPFCYSC 439
>Os09g0283600 Zinc finger, RING-type domain containing protein
Length = 331
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 20/218 (9%)
Query: 60 LTCGICFEGCAANAM--SCAGCSHFYCHECWEGYISAAVNDGPGCLVLQCPEPSCDAIVL 117
L C IC + A+ GC+H +C C G+I+A ++ G G + CPE C + V
Sbjct: 124 LFCKICMDDVPASDAHRGSHGCAHAFCAACLAGHIAAKLHSGGG---VYCPEDGCASAVD 180
Query: 118 EDMINSLTKDEDKVKYARFVLWSYIGVNNKIKWCPAPDCTCAVEFLGDGNYD---VSC-K 173
++ + +++ ++ + + + + + +CP DC + G+ D C
Sbjct: 181 PELCQPILPEDNFERWCAALCRAMV-LGGRHVYCPFTDCAEIIADERGGDSDGQPTECPA 239
Query: 174 CKFSFCWNCAEEAHRPVSCDTVSKWILKNSAESENMNWILAYS---KPCPKCKRPIEKNQ 230
C+ FC C H VSC + + + E + +A + CP+CK +++ +
Sbjct: 240 CRRRFCERCGVAWHGGVSCGEYGELAVGDRGEGDLAVVEMAKGSRWRRCPRCKFFVDRYE 299
Query: 231 GCMHMTCTPPCKFEFCWLCLGAWSDHGDGTGGFYACNR 268
GC H+TC C EFC+ C W G G +C R
Sbjct: 300 GCSHITCR--CGLEFCYGCGQEW-----GPTGHSSCQR 330
>Os08g0451900 Zinc finger, RING-type domain containing protein
Length = 228
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 83/193 (43%), Gaps = 21/193 (10%)
Query: 61 TCGICFEGCA---ANAMSCAGCSHFYCHECWEGYISAAVNDGPGCLVLQCPEPSCDAIVL 117
+CGIC E A+ GC+H +C C G++ A V G G ++CP+PSC +
Sbjct: 29 SCGICMEPMPPSEAHRGGGGGCAHAFCRACLAGHVRAKVESGGGAGAVRCPDPSCGGALD 88
Query: 118 EDMINSLTKDEDKVKYARFVLWSYIGVNNKIKWCPAPDCTCAVEFLGDGNYDVSC----- 172
++ + ++ L + + +CP P C+ E + D C
Sbjct: 89 PELCRGALPGDVFERWC-AALCEAMFAGARRTYCPYPGCS---EMMVADADDEGCAGVTQ 144
Query: 173 ----KCKFSFCWNCAEEAHRPVSCDTVSKWILKNSAESENMNWILAYS----KPCPKCKR 224
C+ FC C H VSC + + + E++ + A K CP+C+
Sbjct: 145 SECQACRRLFCARCGVPWHAGVSCAEFGR-LGEGERGREDLLLVQAARNGGWKRCPRCRF 203
Query: 225 PIEKNQGCMHMTC 237
+EK+ GC+H+TC
Sbjct: 204 YVEKSHGCLHITC 216
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.134 0.447
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 18,743,695
Number of extensions: 811107
Number of successful extensions: 2266
Number of sequences better than 1.0e-10: 18
Number of HSP's gapped: 2185
Number of HSP's successfully gapped: 18
Length of query: 516
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 411
Effective length of database: 11,553,331
Effective search space: 4748419041
Effective search space used: 4748419041
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 158 (65.5 bits)