Os04g0593700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : RWD domain containing protein.
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Os04g0593700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : RWD domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 42.49 | 0.306 | 6.98 | -1.48 | 0.447 | 0.543 | -0.59 | -0.55 | -0.39 | 22.2 | 92.07 | 1355 | -- | -- |
| 42.92 | 0.305 | 6.98 | -1.43 | 0.441 | 0.504 | -0.611 | -- | -0.384 | 22.1 | 91.86 | 1342 | -- | -- |
| 43.81 | 0.308 | 6.98 | -1.46 | 0.441 | 0.539 | -- | -0.651 | -0.395 | 22.4 | 92.6 | 1335 | -- | -- |
| 44.34 | 0.31 | 6.97 | -1.4 | 0.454 | 0.473 | -- | -- | -0.375 | 22.5 | 92 | 1375 | -- | -- |
| 47.38 | 0.321 | 6.97 | -1.49 | -- | 0.854 | -- | -1.17 | -0.397 | -- | 104.3 | 897 | -- | -- |
| 48.59 | 0.327 | 6.97 | -1.38 | 0.473 | -- | -0.498 | -- | -0.369 | 22.6 | -- | -- | -- | -- |
| 49.57 | 0.33 | 6.97 | -1.37 | 0.474 | -- | -- | -- | -0.368 | 22.8 | -- | -- | -- | -- |
| 49.28 | 0.327 | 6.96 | -1.4 | -- | 0.827 | -- | -- | -0.383 | -- | 107.2 | 938 | -- | -- |
| 93.87 | 0.451 | 6.96 | -- | 0.455 | 0.501 | -- | -- | -0.343 | 22.5 | 93 | 8426 | -- | -- |
| 63.5 | 0.372 | 6.96 | -1.36 | -- | -- | -- | -- | -0.365 | -- | -- | -- | -- | -- |
| 98.71 | 0.465 | 6.94 | -- | 0.464 | -- | -- | -- | -0.216 | 22.6 | -- | -- | -- | -- |
| 84.53 | 0.428 | 6.91 | -- | -- | 1.03 | -- | -- | -0.108 | -- | 68 | 47093 | -- | -- |
| 111.98 | 0.494 | 6.93 | -- | -- | -- | -- | -- | -0.214 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 41.49 | wind | 1.0 | 4320 | < th | dose independent | rect. | 1 | 5 |
| 3 | 41.59 | wind | 1.0 | 4320 | > th | dose independent | rect. | 24 | 6 |
| 4 | 41.68 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 7 | 5 |
| 7 | 41.76 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 7 | 5 |
| 13 | 41.84 | wind | 1.0 | 4320 | < th | dose independent | rect. | 19 | 11 |
| 15 | 41.85 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 4 | 15 |
| 16 | 41.86 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 6 | 13 |
| 26 | 41.93 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 16 | 3 |
| 31 | 41.95 | wind | 1.0 | 4320 | > th | dose independent | rect. | 19 | 11 |
| 50 | 41.99 | humidity | 50.0 | 1440 | > th | dose dependent | sin | 2 | NA |
| 54 | 42.00 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 5 | 14 |
| 64 | 42.03 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 15 | 14 |
| 85 | 42.08 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 7 | 6 |
| 86 | 42.08 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 15 | 10 |
| 91 | 42.09 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 15 | 4 |
| 105 | 42.10 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 16 | 3 |
| 122 | 42.12 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 4 | 9 |
| 157 | 42.17 | humidity | 90.0 | 1440 | < th | dose dependent | sin | 2 | NA |
| 226 | 42.26 | wind | 1.0 | 4320 | < th | dose dependent | rect. | 1 | 5 |
| 227 | 42.26 | wind | 9.0 | 1440 | < th | dose dependent | rect. | 24 | 6 |
| 241 | 42.27 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 16 | 19 |
| 277 | 42.32 | radiation | 10.0 | 1440 | < th | dose dependent | sin | 14 | NA |
| 346 | 42.38 | humidity | 80.0 | 1440 | > th | dose independent | sin | 4 | NA |
| 347 | 42.38 | wind | 7.0 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 434 | 42.45 | wind | 1.0 | 1440 | > th | dose dependent | rect. | 24 | 6 |
| 517 | 42.52 | humidity | 80.0 | 1440 | < th | dose independent | sin | 4 | NA |
| 538 | 42.53 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 549 | 42.54 | wind | 7.0 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 552 | 42.54 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 7 | 12 |
| 669 | 42.62 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 683 | 42.63 | humidity | 90.0 | 1440 | < th | dose dependent | no | NA | NA |
| 705 | 42.64 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 711 | 42.65 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 15 | 21 |
| 726 | 42.66 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 13 | 16 |
| 741 | 42.66 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 13 | 16 |
| 767 | 42.68 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 17 | 16 |
| 785 | 42.69 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 7 | 12 |
| 786 | 42.69 | wind | 1.0 | 4320 | > th | dose independent | rect. | 12 | 18 |
| 797 | 42.69 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 16 | 21 |
| 839 | 42.72 | radiation | 1.0 | 720 | > th | dose independent | rect. | 17 | 22 |
| 840 | 42.72 | humidity | 50.0 | 1440 | > th | dose dependent | no | NA | NA |
| 841 | 42.72 | wind | 3.0 | 4320 | < th | dose dependent | rect. | 2 | 2 |
| 843 | 42.72 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 16 | 5 |
| 948 | 42.77 | humidity | 70.0 | 1440 | < th | dose independent | sin | 11 | NA |
| 971 | 42.78 | humidity | 70.0 | 1440 | > th | dose independent | sin | 11 | NA |
| 976 | 42.78 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 15 | 19 |