Os09g0283600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Zinc finger, RING-type domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os09g0283600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Zinc finger, RING-type domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 369.08 | 0.903 | 6.57 | -1.15 | 1.53 | -1.82 | -0.184 | 2.13 | -0.648 | 11 | 23.7 | 1456 | -- | -- |
| 377.16 | 0.905 | 6.5 | -0.302 | 1.5 | -1.72 | -0.315 | -- | -0.441 | 11.2 | 23.62 | 1415 | -- | -- |
| 369.16 | 0.895 | 6.56 | -1.15 | 1.54 | -1.82 | -- | 2.1 | -0.645 | 11 | 23.79 | 1438 | -- | -- |
| 376.66 | 0.904 | 6.48 | -0.334 | 1.54 | -1.72 | -- | -- | -0.412 | 11.1 | 23.67 | 1413 | -- | -- |
| 487.6 | 1.03 | 6.5 | -0.463 | -- | -1.41 | -- | 0.598 | -0.285 | -- | 23.6 | 1566 | -- | -- |
| 507.26 | 1.06 | 6.3 | 0.362 | 1.47 | -- | -0.152 | -- | 0.376 | 10.8 | -- | -- | -- | -- |
| 507.35 | 1.05 | 6.3 | 0.356 | 1.47 | -- | -- | -- | 0.375 | 10.8 | -- | -- | -- | -- |
| 481.94 | 1.03 | 6.47 | -0.239 | -- | -1.44 | -- | -- | -0.218 | -- | 23.5 | 1562 | -- | -- |
| 379.4 | 0.907 | 6.47 | -- | 1.54 | -1.65 | -- | -- | -0.346 | 11.1 | 23.65 | 1402 | -- | -- |
| 641.75 | 1.18 | 6.34 | 0.326 | -- | -- | -- | -- | 0.366 | -- | -- | -- | -- | -- |
| 510.7 | 1.06 | 6.31 | -- | 1.47 | -- | -- | -- | 0.335 | 10.8 | -- | -- | -- | -- |
| 480.51 | 1.02 | 6.46 | -- | -- | -1.42 | -- | -- | -0.177 | -- | 23.4 | 1562 | -- | -- |
| 644.55 | 1.19 | 6.35 | -- | -- | -- | -- | -- | 0.33 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 337.65 | wind | 5 | 43200 | > th | dose independent | rect. | 14 | 8 |
| 9 | 340.06 | wind | 5 | 43200 | < th | dose independent | rect. | 13 | 10 |
| 29 | 342.11 | wind | 5 | 43200 | > th | dose independent | rect. | 16 | 5 |
| 44 | 343.35 | wind | 1 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 47 | 343.61 | wind | 9 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 57 | 344.33 | wind | 5 | 43200 | > th | dose independent | sin | 18 | NA |
| 59 | 344.39 | wind | 5 | 43200 | > th | dose dependent | rect. | 14 | 7 |
| 64 | 344.93 | wind | 5 | 43200 | < th | dose independent | rect. | 16 | 5 |
| 71 | 345.08 | wind | 5 | 43200 | < th | dose independent | sin | 18 | NA |
| 73 | 345.11 | wind | 5 | 43200 | > th | dose independent | rect. | 13 | 2 |
| 74 | 345.17 | wind | 5 | 43200 | > th | dose independent | rect. | 11 | 6 |
| 80 | 345.46 | wind | 3 | 43200 | > th | dose dependent | rect. | 13 | 10 |
| 94 | 346.26 | wind | 5 | 43200 | < th | dose independent | rect. | 11 | 6 |
| 130 | 347.68 | wind | 5 | 43200 | < th | dose independent | rect. | 13 | 2 |
| 133 | 347.76 | wind | 5 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 139 | 347.87 | wind | 5 | 43200 | > th | dose dependent | rect. | 14 | 3 |
| 238 | 351.58 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 257 | 352.29 | wind | 3 | 43200 | > th | dose dependent | sin | 18 | NA |
| 280 | 353.04 | wind | 5 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 281 | 353.04 | wind | 3 | 43200 | > th | dose dependent | rect. | 11 | 6 |
| 303 | 353.84 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 313 | 354.30 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 317 | 354.36 | humidity | 80 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 350 | 355.43 | radiation | 1 | 14400 | < th | dose dependent | rect. | 2 | 3 |
| 373 | 356.18 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 393 | 356.84 | humidity | 80 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 456 | 358.86 | wind | 9 | 43200 | < th | dose dependent | rect. | 13 | 2 |
| 519 | 360.40 | wind | 9 | 43200 | < th | dose dependent | rect. | 11 | 11 |
| 540 | 360.75 | wind | 3 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 580 | 361.64 | wind | 9 | 43200 | < th | dose dependent | rect. | 13 | 9 |
| 646 | 362.92 | radiation | 40 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 661 | 363.13 | wind | 9 | 43200 | < th | dose dependent | rect. | 11 | 5 |
| 722 | 364.18 | wind | 9 | 43200 | < th | dose dependent | rect. | 9 | 8 |
| 775 | 364.88 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 823 | 365.51 | radiation | 40 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 855 | 365.97 | radiation | 20 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 864 | 366.07 | wind | 9 | 43200 | < th | dose dependent | rect. | 16 | 6 |
| 895 | 366.39 | radiation | 20 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 987 | 367.44 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 6 |
| 988 | 367.44 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 10 |
| 989 | 367.45 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 4 |
| 991 | 367.47 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 2 |