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Os03g0233500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : UBA-like domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.6 (0.0156) R2 : 0.00431
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0462 (0.0329) R2dN8 : 0.00557 R2N8 : 0.00431
σ : 0.294
deviance : 39.74
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
26.79 0.243 10.6 0.384 0.38 -0.199 0.222 -0.902 -0.0187 7.03 61.58 1416 -- --
27.1 0.242 10.6 0.303 0.382 -0.359 0.224 -- -0.0859 7.14 65.85 2805 -- --
26.92 0.242 10.6 0.383 0.379 -0.2 -- -0.915 -0.0185 6.95 62.28 1423 -- --
27.21 0.243 10.6 0.311 0.385 -0.365 -- -- -0.0965 6.95 67.86 2856 -- --
34.49 0.274 10.6 0.383 -- -0.232 -- -0.877 -0.0228 -- 62.01 1388 -- --
29.32 0.254 10.6 0.287 0.388 -- 0.233 -- -0.0198 6.86 -- -- -- --
29.46 0.254 10.6 0.291 0.389 -- -- -- -0.0205 6.82 -- -- -- --
34.93 0.275 10.6 0.318 -- -0.377 -- -- -0.0879 -- 67.04 2824 -- --
29.75 0.254 10.6 -- 0.387 -0.314 -- -- -0.111 6.88 67 2857 -- --
37.38 0.286 10.6 0.299 -- -- -- -- -0.013 -- -- -- -- --
31.69 0.263 10.6 -- 0.392 -- -- -- -0.0529 6.77 -- -- -- --
37.58 0.286 10.6 -- -- -0.341 -- -- -0.112 -- 65 2823 -- --
39.74 0.294 10.6 -- -- -- -- -- -0.0462 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 24.93 temperature 25.0 270 < th dose independent rect. 4 2
3 25.25 humidity 90.0 270 > th dose independent rect. 4 2
6 25.61 temperature 20.0 90 > th dose independent rect. 9 19
14 25.85 temperature 25.0 270 < th dose independent rect. 8 3
16 25.88 radiation 30.0 90 < th dose independent rect. 4 5
17 25.88 temperature 10.0 270 > th dose dependent rect. 18 9
20 25.91 temperature 20.0 270 > th dose independent rect. 18 8
25 25.96 atmosphere 1015.0 90 < th dose independent rect. 9 19
26 25.96 temperature 20.0 720 > th dose dependent rect. 4 5
28 25.98 humidity 60.0 90 > th dose independent rect. 4 5
29 25.98 wind 9.0 90 < th dose dependent rect. 9 19
31 26.01 wind 9.0 90 < th dose independent rect. 4 5
32 26.01 temperature 10.0 90 > th dose independent rect. 4 5
35 26.01 atmosphere 995.0 90 > th dose independent rect. 4 5
36 26.01 atmosphere 1015.0 90 < th dose independent rect. 4 5
37 26.01 precipitation 0.1 90 < th dose independent rect. 4 5
39 26.01 precipitation 0.1 90 < th dose dependent rect. 4 5
48 26.04 atmosphere 995.0 90 > th dose independent rect. 9 19
50 26.05 radiation 30.0 270 < th dose independent rect. 1 8
51 26.05 wind 5.0 90 < th dose independent rect. 9 19
63 26.10 atmosphere 1015.0 90 < th dose dependent rect. 4 5
71 26.12 humidity 50.0 30 > th dose independent rect. 14 19
73 26.13 humidity 50.0 30 > th dose independent rect. 16 17
78 26.15 wind 9.0 90 < th dose dependent rect. 4 5
82 26.16 wind 9.0 90 < th dose independent rect. 9 19
83 26.16 temperature 15.0 270 > th dose independent rect. 6 22
98 26.17 temperature 20.0 270 > th dose independent rect. 9 16
114 26.19 wind 9.0 10 < th dose dependent rect. 5 4
117 26.20 radiation 1.0 30 > th dose dependent rect. 9 3
129 26.21 radiation 1.0 10 > th dose independent rect. 9 7
139 26.23 temperature 20.0 720 > th dose independent rect. 5 1
140 26.23 temperature 30.0 10 < th dose independent rect. 9 5
143 26.23 precipitation 0.1 30 < th dose independent rect. 16 17
146 26.23 temperature 15.0 10 > th dose dependent rect. 20 9
147 26.23 precipitation 0.1 30 < th dose dependent rect. 16 17
155 26.25 atmosphere 1015.0 270 < th dose dependent rect. 3 3
156 26.25 humidity 50.0 90 > th dose dependent rect. 4 5
157 26.26 radiation 30.0 90 < th dose independent rect. 3 8
162 26.27 temperature 30.0 14400 < th dose independent rect. 14 1
167 26.27 temperature 15.0 270 > th dose independent rect. 22 14
171 26.28 temperature 30.0 14400 > th dose independent rect. 14 1
173 26.28 radiation 40.0 10 < th dose independent rect. 5 15
174 26.28 humidity 50.0 270 > th dose dependent rect. 4 2
176 26.29 atmosphere 1010.0 270 < th dose independent rect. 4 2
181 26.30 precipitation 0.1 270 < th dose independent rect. 4 2
193 26.30 precipitation 0.1 90 < th dose independent rect. 9 19
194 26.30 precipitation 0.1 30 < th dose independent rect. 14 19
196 26.30 precipitation 0.1 270 < th dose dependent rect. 4 2
198 26.30 precipitation 0.1 90 < th dose dependent rect. 9 19
199 26.30 precipitation 0.1 30 < th dose dependent rect. 14 19
203 26.31 radiation 1.0 30 > th dose independent rect. 9 5
205 26.31 temperature 25.0 14400 > th dose dependent rect. 14 1
209 26.32 wind 9.0 270 < th dose independent rect. 4 2
210 26.32 temperature 10.0 270 > th dose independent rect. 4 2
213 26.32 humidity 50.0 270 > th dose independent rect. 4 2
216 26.32 atmosphere 995.0 270 > th dose independent rect. 4 2
218 26.32 radiation 20.0 270 < th dose independent rect. 4 2
222 26.32 wind 9.0 30 < th dose independent rect. 16 17
238 26.33 radiation 40.0 30 < th dose independent rect. 14 19
241 26.33 humidity 90.0 30 < th dose dependent rect. 9 5
246 26.34 temperature 10.0 1440 > th dose independent rect. 10 7
250 26.34 temperature 10.0 1440 > th dose independent rect. 17 17
253 26.34 wind 9.0 30 < th dose independent rect. 14 19
256 26.34 radiation 30.0 270 < th dose dependent rect. 4 2
267 26.35 temperature 10.0 14400 > th dose dependent rect. 14 1
270 26.35 radiation 40.0 90 < th dose dependent rect. 4 5
279 26.36 temperature 10.0 1440 > th dose independent rect. 10 5
288 26.36 radiation 40.0 30 < th dose independent rect. 16 17
291 26.36 temperature 10.0 1440 > th dose independent rect. 15 19
296 26.36 atmosphere 995.0 270 > th dose independent rect. 6 22
297 26.36 temperature 30.0 270 < th dose dependent rect. 9 1
304 26.37 temperature 10.0 1440 > th dose independent rect. 5 5
307 26.37 atmosphere 995.0 1440 > th dose independent rect. 5 5
308 26.37 atmosphere 1015.0 1440 < th dose independent rect. 5 5
311 26.37 temperature 10.0 30 > th dose independent rect. 9 7
313 26.37 atmosphere 1015.0 30 < th dose independent rect. 9 7
314 26.37 precipitation 0.1 30 < th dose independent rect. 9 7
315 26.37 temperature 10.0 30 > th dose independent rect. 16 17
316 26.37 radiation 40.0 10 < th dose independent rect. 5 17
318 26.37 temperature 10.0 1440 > th dose independent rect. 10 19
324 26.37 precipitation 0.1 30 < th dose dependent rect. 9 7
331 26.38 atmosphere 995.0 30 > th dose independent rect. 9 7
357 26.39 temperature 30.0 270 < th dose dependent rect. 3 3
362 26.39 temperature 10.0 90 > th dose dependent rect. 4 5
364 26.39 radiation 1.0 90 > th dose dependent rect. 9 5
367 26.40 wind 1.0 14400 > th dose independent rect. 4 1
368 26.40 humidity 80.0 1440 < th dose independent rect. 19 1
370 26.40 temperature 10.0 30 > th dose independent rect. 9 5
372 26.40 atmosphere 995.0 30 > th dose independent rect. 9 5
373 26.40 atmosphere 1015.0 30 < th dose independent rect. 9 5
376 26.40 temperature 10.0 30 > th dose independent rect. 14 19
386 26.41 precipitation 0.1 30 < th dose independent rect. 9 5
396 26.41 precipitation 0.1 30 < th dose dependent rect. 9 5
421 26.42 temperature 20.0 720 > th dose dependent rect. 5 1
440 26.43 humidity 90.0 30 < th dose independent rect. 9 5
443 26.43 wind 9.0 30 < th dose independent rect. 9 7
466 26.43 humidity 50.0 10 > th dose dependent rect. 5 4
504 26.45 wind 9.0 270 < th dose dependent rect. 4 2
534 26.46 wind 9.0 30 < th dose independent rect. 9 5
570 26.46 temperature 15.0 10 > th dose dependent rect. 22 7
577 26.47 wind 1.0 14400 < th dose independent rect. 4 1
628 26.48 wind 1.0 270 > th dose independent rect. 12 10
629 26.48 wind 9.0 270 < th dose independent rect. 12 10
657 26.48 wind 1.0 14400 < th dose dependent rect. 4 1
705 26.49 humidity 90.0 30 < th dose independent rect. 9 7
718 26.49 atmosphere 1015.0 270 < th dose independent rect. 22 14
725 26.49 radiation 1.0 30 > th dose independent rect. 16 17
734 26.49 temperature 30.0 14400 < th dose dependent rect. 14 1
773 26.50 humidity 60.0 30 > th dose independent rect. 12 21
774 26.50 temperature 25.0 14400 > th dose dependent sin 0 NA
775 26.50 temperature 30.0 270 < th dose dependent rect. 4 1
779 26.50 temperature 30.0 270 < th dose dependent rect. 8 3
780 26.50 radiation 40.0 10 < th dose dependent rect. 5 4
817 26.51 temperature 30.0 14400 > th dose independent sin 14 NA
820 26.51 temperature 30.0 14400 < th dose independent sin 14 NA
823 26.51 temperature 25.0 14400 > th dose independent rect. 8 1
828 26.51 precipitation 0.1 270 < th dose independent rect. 1 7
840 26.51 temperature 25.0 270 < th dose independent rect. 14 17
853 26.51 temperature 25.0 14400 > th dose dependent sin 22 NA
870 26.51 precipitation 0.1 270 < th dose dependent rect. 1 7
925 26.52 temperature 30.0 90 < th dose independent rect. 9 19
947 26.52 temperature 30.0 30 < th dose dependent rect. 4 5
988 26.53 humidity 70.0 270 > th dose independent rect. 1 7
993 26.53 atmosphere 1015.0 270 < th dose independent rect. 6 21