BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0233500 Os03g0233500|AK073139
(612 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0233500 UBA-like domain containing protein 1229 0.0
Os03g0625800 Zinc finger, RING-type domain containing protein 502 e-142
Os03g0626000 431 e-121
Os03g0626100 Zinc finger, RING-type domain containing protein 402 e-112
Os08g0540300 Zinc finger, RING-type domain containing protein 234 2e-61
Os09g0513800 Similar to ARIADNE-like protein 211 9e-55
Os04g0492100 Similar to ARIADNE-like protein 209 5e-54
Os09g0559000 Zinc finger, RING-type domain containing protein 205 1e-52
Os09g0559100 Zinc finger, C6HC-type domain containing protein 174 3e-43
AK110331 164 2e-40
Os08g0451800 Zinc finger, RING-type domain containing protein 77 5e-14
Os09g0435200 68 2e-11
Os04g0593700 RWD domain containing protein 67 5e-11
>Os03g0233500 UBA-like domain containing protein
Length = 612
Score = 1229 bits (3180), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 590/612 (96%), Positives = 590/612 (96%)
Query: 1 MVTDAEEVSPTAXXXXXXXXXXXXXXXXXXXXXXALEESVLQVLEDERDEDCHWSSTSVI 60
MVTDAEEVSPTA ALEESVLQVLEDERDEDCHWSSTSVI
Sbjct: 1 MVTDAEEVSPTASSSELEQEDDDDDCYLSDQEDDALEESVLQVLEDERDEDCHWSSTSVI 60
Query: 61 TKESLLAAQREDLRKVMELLGLREHHARTLLIHYRWDVERIFELLDQKGRDRLFSEAGIP 120
TKESLLAAQREDLRKVMELLGLREHHARTLLIHYRWDVERIFELLDQKGRDRLFSEAGIP
Sbjct: 61 TKESLLAAQREDLRKVMELLGLREHHARTLLIHYRWDVERIFELLDQKGRDRLFSEAGIP 120
Query: 121 LQPANNPGSPSSTEVTCNVCYDDVPLSDASKMDCGHNYCNECWTGYFIVKINEGQSRRIK 180
LQPANNPGSPSSTEVTCNVCYDDVPLSDASKMDCGHNYCNECWTGYFIVKINEGQSRRIK
Sbjct: 121 LQPANNPGSPSSTEVTCNVCYDDVPLSDASKMDCGHNYCNECWTGYFIVKINEGQSRRIK 180
Query: 181 CMALKCNTICDEAIVRKLVNAKRPDIAERFERFLLESYIEDNDTVKWCPSTPHCGNAIRV 240
CMALKCNTICDEAIVRKLVNAKRPDIAERFERFLLESYIEDNDTVKWCPSTPHCGNAIRV
Sbjct: 181 CMALKCNTICDEAIVRKLVNAKRPDIAERFERFLLESYIEDNDTVKWCPSTPHCGNAIRV 240
Query: 241 KGDIHCEVECTCGRQFCFNCSSEAHSPCSCVMWELWIKKCRDESETVNWITVNTKPCPKC 300
KGDIHCEVECTCGRQFCFNCSSEAHSPCSCVMWELWIKKCRDESETVNWITVNTKPCPKC
Sbjct: 241 KGDIHCEVECTCGRQFCFNCSSEAHSPCSCVMWELWIKKCRDESETVNWITVNTKPCPKC 300
Query: 301 HKPVEKNGGCNLVACICGQAFCWLCGGATGRDHTWSSISGHSCGRFTEDQSKKTEQARRN 360
HKPVEKNGGCNLVACICGQAFCWLCGGATGRDHTWSSISGHSCGRFTEDQSKKTEQARRN
Sbjct: 301 HKPVEKNGGCNLVACICGQAFCWLCGGATGRDHTWSSISGHSCGRFTEDQSKKTEQARRN 360
Query: 361 LYRYMHYHNRYKAHTDSLKQEAKLKGDIQGKISISENKDSKIKDYSWVINGLNRLFRSRR 420
LYRYMHYHNRYKAHTDSLKQEAKLKGDIQGKISISENKDSKIKDYSWVINGLNRLFRSRR
Sbjct: 361 LYRYMHYHNRYKAHTDSLKQEAKLKGDIQGKISISENKDSKIKDYSWVINGLNRLFRSRR 420
Query: 421 VLSYSYPFAFYMFGDEIFKDEMTSDERELKQNLFEDQQQQLEFNVERLSGFLERDFQNFS 480
VLSYSYPFAFYMFGDEIFKDEMTSDERELKQNLFEDQQQQLEFNVERLSGFLERDFQNFS
Sbjct: 421 VLSYSYPFAFYMFGDEIFKDEMTSDERELKQNLFEDQQQQLEFNVERLSGFLERDFQNFS 480
Query: 481 DDEVMDTMKHVINLSNVVDRLCKQMYQCIENDLLYPLRTPHNIAPYKSKGLDRASELNVC 540
DDEVMDTMKHVINLSNVVDRLCKQMYQCIENDLLYPLRTPHNIAPYKSKGLDRASELNVC
Sbjct: 481 DDEVMDTMKHVINLSNVVDRLCKQMYQCIENDLLYPLRTPHNIAPYKSKGLDRASELNVC 540
Query: 541 WDSSEQGLQPIKYSQDEHKSQPGLSGSSIFGKRQLGSSSNNNGRPHKRERNDAHGGAALF 600
WDSSEQGLQPIKYSQDEHKSQPGLSGSSIFGKRQLGSSSNNNGRPHKRERNDAHGGAALF
Sbjct: 541 WDSSEQGLQPIKYSQDEHKSQPGLSGSSIFGKRQLGSSSNNNGRPHKRERNDAHGGAALF 600
Query: 601 DLNVPAEVADKI 612
DLNVPAEVADKI
Sbjct: 601 DLNVPAEVADKI 612
>Os03g0625800 Zinc finger, RING-type domain containing protein
Length = 540
Score = 502 bits (1293), Expect = e-142, Method: Compositional matrix adjust.
Identities = 253/509 (49%), Positives = 337/509 (66%), Gaps = 14/509 (2%)
Query: 36 LEESVLQV-LEDERDEDCHWSSTSVITKESLLAAQREDLRKVMELLGLREHHARTLLIHY 94
LEE L + L D+R DC W+ IT+ESL AAQ++DL VM LL +++H ARTLLIH+
Sbjct: 36 LEEDDLHLRLPDDRPADC-WA----ITQESLPAAQQQDLSMVMNLLNIKQHLARTLLIHH 90
Query: 95 RWDVERIFELLDQKGRDRLFSEAGIPLQPANNPGSPSSTEVTCNVCYDDVPLSDASKMDC 154
RW + I++ LD+KGRDR+ SEA I L P N+ + SST VTCNVC++D ++D S MDC
Sbjct: 91 RWKMHCIYDHLDRKGRDRMLSEACIIL-PKNSMSAASSTSVTCNVCFEDFSMTDVSTMDC 149
Query: 155 GHNYCNECWTGYFIVKINEGQSRRIKCMALKCNTICDEAIVRKLVNAKRPDIAERFERFL 214
GH +CN+CWT +F IN G +++I+CM +KC ICDE IVR+L++ K P ++RF+ L
Sbjct: 150 GHCFCNDCWTEHFFASINTG-NKQIRCMEVKCKAICDEDIVRRLLSLKYPAASKRFDLLL 208
Query: 215 LESYIEDNDTVKWCPSTPHCGNAIRV-KGDIHCEVECTCGRQFCFNCSSEAHSPCSCVMW 273
LESY+EDND+VKWCPS PHCG AI+V G+ +CEV C CG FCFNC+ + HSPC C +W
Sbjct: 209 LESYLEDNDSVKWCPSAPHCGRAIQVGTGERYCEVACPCGVSFCFNCAGQVHSPCPCAIW 268
Query: 274 ELWIKKCRDESETVNWITVNTKPCPKCHKPVEKNGGCNLVACICGQAFCWLCGGATGRDH 333
E W K +S++V WI NTK CPKC KP+EKNGGCNLV C CGQ CWLCGG TGR+H
Sbjct: 269 EKWKAKGHGDSDSVKWILANTKSCPKCSKPIEKNGGCNLVHCKCGQCLCWLCGGPTGREH 328
Query: 334 TWSSISGHSCGRFTEDQSKKTEQARRNLYRYMHYHNRYKAHTDSLKQEAK-LKGDIQGKI 392
TW SISGHSC R+ E+ K + +R+ + RY HY +RY H S K E K L ++ ++
Sbjct: 329 TWDSISGHSCNRYKEENGDKVDTSRQQMQRYTHYWDRYNIHAGSYKVEQKDLGPAVEEQV 388
Query: 393 SISENKDSKIK---DYSWVINGLNRLFRSRRVLSYSYPFAFYMF-GDEIFKDEMTSDERE 448
E+ + K D SW+ L SR+VLS SY FA+YMF G E+
Sbjct: 389 KKLESNLTGPKMNWDGSWLAMAYQSLLASRQVLSRSYAFAYYMFGGGEVKTHPSERASLA 448
Query: 449 LKQNLFEDQQQQLEFNVERLSGFLERDFQNFSDDEVMDTMKHVINLSNVVDRLCKQMYQC 508
+ QNLFED+Q+QLE +VE LS L D ++E++ + NL+ +V +C Q+Y+C
Sbjct: 449 VAQNLFEDRQEQLERHVEHLSKELATDLLGLPEEEIVLKKVEIANLAKIVQAICGQLYRC 508
Query: 509 IENDLLYPLRTPHNIAPYKSKGLDRASEL 537
I+++LL L P NIA Y+ G D+A E
Sbjct: 509 IQDELLPLLVQPMNIAAYQPDGPDKAKEF 537
>Os03g0626000
Length = 565
Score = 431 bits (1109), Expect = e-121, Method: Compositional matrix adjust.
Identities = 232/529 (43%), Positives = 304/529 (57%), Gaps = 37/529 (6%)
Query: 47 ERDEDCHWSSTSVITKESLLAAQREDLRKVMELLGLREHHARTLLIHYRWDVERIFELLD 106
ER DC W+ IT+ESL AAQ++DL VM LL +++H AR LLIH+RW +E I + D
Sbjct: 43 ERPVDC-WA----ITEESLPAAQQQDLSMVMNLLYIKQHQARALLIHHRWKMESILDHFD 97
Query: 107 QKGRDRLFSEAGIPLQ----PANNPGSPSSTE----------VTCNVCYDDVPLSDASKM 152
+KGRDR+ E G+ +Q N G + VTC VC++DV S M
Sbjct: 98 RKGRDRMLRETGVVIQQQAEEKNGGGMAMAASPSPPPRPRSSVTCYVCFEDVSSDAVSTM 157
Query: 153 DCGHNYCNECWTGYFIVKINEGQSRRIKCMALKCNTICDEAIVRKLVNAKRPDIAERFER 212
DCGH +CN+CWT +F +N GQ ++I+CMA+ C +CDE + ++L+ + P A R
Sbjct: 158 DCGHCFCNDCWTEHFFACVNGGQ-KQIRCMAVGCAAVCDEDVAQRLLGGRYPGAARRLRG 216
Query: 213 FLLESYIEDNDTVKWCPSTPHCGNAIRVKGDIH---CEVECTCGRQFCFNCSSEAHSPCS 269
LL SY+EDN +WCPS PHCG A+RV G CEV C CG FCF C++ AHSPC
Sbjct: 217 ALLASYVEDNAAARWCPSAPHCGRAVRVDGGGGRWCCEVSCPCGASFCFGCAAPAHSPCP 276
Query: 270 CVMWELWIKKCRDESETVNWITVNTKPCPKCHKPVEKNGGCNLVACICGQAFCWLCGGAT 329
C MWE W KCR ES V+WI NTK CPKC KP+EKNGGCN V C CGQ CWLCG AT
Sbjct: 277 CAMWERWEAKCRGESMNVDWILANTKSCPKCSKPIEKNGGCNHVRCKCGQCLCWLCGAAT 336
Query: 330 GRDHTWSSISGHSCGRFTEDQSK-KTEQARRNLYRYMHYHNRYKAHTDSLKQEA-KLKGD 387
G H W+SI GHSC R+ + K K + ARR + RY HY+ RYKAH DS + EA KL
Sbjct: 337 GLAHNWTSIDGHSCNRYDDAAEKRKVDGARRKVLRYAHYYERYKAHGDSRRAEAEKLGPA 396
Query: 388 IQGKI-SISENKDSKIKDYSW-----VINGLNRLFRSRRVLSYSYPFAFYMFGDE--IFK 439
I+ + + E+ D S + L SR VLS SY FA++MFG E K
Sbjct: 397 IEARARRLREDPDPATAPASGDAAEALAAAHRALLASRDVLSRSYAFAYHMFGGEERTLK 456
Query: 440 DEMTSDERELKQNLFEDQQQQLEFNVERLSGFLERDFQNFSDDEVMDTMKH----VINLS 495
E Q LFED Q+ E +VE+LSG L D ++ + L+
Sbjct: 457 AAAPESEVATAQALFEDHQEMAERHVEKLSGLLAADAPPAPATAGDAALRRAKQDAVALT 516
Query: 496 NVVDRLCKQMYQCIENDLLYPLRTPHNIAPYKSKGLDRASELNVCWDSS 544
VV++ C +M++CI+++LL L P +IA Y+ G +A + C +S
Sbjct: 517 AVVEKHCGEMHKCIQDELLPMLVEPMSIAAYRRDGPIKAKDFPTCGGAS 565
>Os03g0626100 Zinc finger, RING-type domain containing protein
Length = 570
Score = 402 bits (1034), Expect = e-112, Method: Compositional matrix adjust.
Identities = 224/534 (41%), Positives = 298/534 (55%), Gaps = 49/534 (9%)
Query: 36 LEESVLQVLEDERDEDCHWSSTSVITKESLLAAQREDLRKVMELLGLREHHARTLLIHYR 95
L+ + L E+E + H + ITKESL AAQ +DL VM L+ + H+AR LL H+R
Sbjct: 38 LDGAALPPPEEEVE---HRAICWAITKESLAAAQEQDLSMVMNLVNVERHNARALLAHHR 94
Query: 96 WDVERIFELLDQKGRDRLFSEAGIPLQP-------------ANNPGSPSSTEVTCNVCYD 142
W +ERI++ LD GRD L +AG+ + P NP P S VTCNVC++
Sbjct: 95 WKMERIYDRLDMMGRDALLRDAGVVVLPEKSSSSGSSMAMAKTNP--PGSVAVTCNVCFE 152
Query: 143 DVPLSDASKMDCGHNYCNECWTGYFIVKINEGQSRRIKCMALKCNTICDEAIVRKLVNAK 202
+ PL S MDCGH +CN+CWT YF +++G S++++CM +KC ICDEA+VR L++ K
Sbjct: 153 EYPLGSVSAMDCGHCFCNDCWTEYFAAAVSDG-SKQMRCMEVKCTAICDEAVVRLLLHGK 211
Query: 203 RPDIAERFERFLLESYIEDNDTVKWCPSTPHCGNAIRVKG-----DIHCEVECTCGRQFC 257
P A R +R LLE+ +E +D V+WCPS PHCG AIRV G + + EV C CG FC
Sbjct: 212 HPGAAARLDRRLLEACVEASDAVRWCPSAPHCGRAIRVDGGGGGEERYAEVSCPCGAVFC 271
Query: 258 FNCSSEAHSPCSCVMWELW-IKKCRDESETVNWITVNTKPCPKCHKPVEKNGGCNLVACI 316
F C AHSPC C MW+ W + E + + WI NTK CPKC KP+EKNGGCN V C
Sbjct: 272 FRCGGGAHSPCPCPMWDKWGAMRGGGEVDNLKWIVANTKSCPKCSKPIEKNGGCNHVTCT 331
Query: 317 CGQAFCWLCGGATGRDHTWSSISGHSCGRFTEDQSKK------TEQARRNLYRYMHYHNR 370
CGQ C+ CG ATG ++ H C R+ E+ T R+ L R+MHY+ R
Sbjct: 332 CGQHLCYACGAATG------TLYMHICNRYKEEGGGGGVKVEMTAGGRQRL-RFMHYYER 384
Query: 371 YKAHTDSLKQEAKLKGDIQGKISISENKDSKI-----KDYSWVINGLNRLFRSRRVLSYS 425
++ HT+S K+E G ++ D+ + +D W RL R R+VL S
Sbjct: 385 FEIHTESYKEEQGKLGPAIDALARRLEADATLPWSGTRDARWPSAAHRRLLRCRQVLPRS 444
Query: 426 YPFAFYMFGDEIFKDEMTSDERE--LKQNLFEDQQQQLEFNVERLSGFLERDFQNFSDDE 483
Y A+YMFG T ERE QN FED Q QLE +VE LS L + E
Sbjct: 445 YVLAYYMFGG----GAATRREREEAAAQNRFEDLQGQLEHHVEVLSRTLAAAARPADAAE 500
Query: 484 VMDTMKHVINLSNVVDRLCKQMYQCIENDLLYPLRTPHNIAPYKSKGLDRASEL 537
V+ + NL+ VV+ LC MY+C++++LL L P NIA Y G A E
Sbjct: 501 VVKAKRDADNLARVVEGLCAGMYRCVQDELLPLLVEPMNIAAYHPDGPAMAKEF 554
>Os08g0540300 Zinc finger, RING-type domain containing protein
Length = 607
Score = 234 bits (597), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 140/444 (31%), Positives = 227/444 (51%), Gaps = 55/444 (12%)
Query: 59 VITKESLLAAQREDLRKVMELLGLREHHARTLLIHYRWDVERIFELL---DQKGRDRLFS 115
V+T++ + Q ED+ KV +L +R A LL HY+W++ ++ + ++K RD +
Sbjct: 81 VLTEKDINERQEEDIGKVSAVLSIRREEACVLLHHYKWNISKLSDEWFADEEKVRDIV-- 138
Query: 116 EAGIPLQPANNPGSPSSTEVTCNVCYDDVPLSDASKMDCGHNYCNECWTGYFIVKINEGQ 175
G+ L N P+S ++TC +C++ S DC H YC+ECW GY I++G
Sbjct: 139 --GLLL---NGIDLPNSRKLTCGICFEGYSSDVMSSADCDHFYCHECWEGYISAAISDGP 193
Query: 176 SRRIKCMALKC-NTICDEAIVRKLVNA-KRPDIAERFERFLLESYIEDNDTVKWCPSTPH 233
C++L+C + C +++ ++N + D R+ RF+L +Y+ED+ KWCP+ P
Sbjct: 194 G----CLSLRCPDPSCGAMVLQNMINKLAKDDDKVRYARFILRAYVEDSKKTKWCPA-PD 248
Query: 234 CGNAIRVKGDIHCEVECTCGRQFCFNCSSEAHSPCSCVMWELWIKKCRDESETVNWITVN 293
C A+ D + +V C C FC+NC+ EAH P +C WI K ESE +NWI N
Sbjct: 249 CTCAVEFVSDGNYDVSCNCKFSFCWNCTEEAHRPVNCETVSRWILKNSAESENMNWILAN 308
Query: 294 TKPCPKCHKPVEKNGGCNLVACI--CGQAFCWLCGGATGRDHTWSSISGHSCGRFT---- 347
+KPCPKC +P+EKN GC + C C FCWLC G+ +H + ++C R+
Sbjct: 309 SKPCPKCKRPIEKNQGCMHMTCTPPCKFEFCWLCLGSWA-EHGERTGGFYACNRYESAKK 367
Query: 348 ----EDQSKKTEQARRNLYRYMHYHNRY--------KAHTDSLKQEAKLKGDIQGKISIS 395
++ + E+A+ +L RYMHY+ R+ KA D K E + + I
Sbjct: 368 EGVYDETEARRERAKNSLERYMHYYERWASNQTSRQKAQADLQKAEKEQLAKLTDVFGIP 427
Query: 396 ENKDSKIKDYSWVINGLNRLFRSRRVLSYSYPFAFYMFGDEIFKDEMTSDERELKQNLFE 455
E + ++I +++ RRVL ++Y + +Y+ + ++K FE
Sbjct: 428 ETQ------LKFIIEAWSQIIECRRVLKWTYAYGYYL-------------DDKVKSEFFE 468
Query: 456 DQQQQLEFNVERLSGFLERDFQNF 479
Q + E +ERL E+D Q+F
Sbjct: 469 YLQGEAESGLERLHQCAEKDLQSF 492
>Os09g0513800 Similar to ARIADNE-like protein
Length = 516
Score = 211 bits (538), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 133/430 (30%), Positives = 214/430 (49%), Gaps = 55/430 (12%)
Query: 73 LRKVMELLGLREHHARTLLIHYRWDVERIFE--LLDQKGRDRLFSEAGIPLQPANNPGSP 130
+ +V + + A LL HY+W + ++ + D++ R G+P + P P
Sbjct: 2 ISRVSAIFSVPRESACVLLRHYKWSISKLSDDWFADEENVRR---SVGLPSNVVHVPDCP 58
Query: 131 SSTEVTCNVCYDDVPLSDASKMDCGHNYCNECWTGYFIVKINEGQSRRIKCMALKC-NTI 189
E+TC +C++ + S C H YC+ECW GY +N+G C+ L+C
Sbjct: 59 ---ELTCGICFEGCAANAMSCAGCSHFYCHECWEGYISAAVNDGPG----CLVLQCPEPS 111
Query: 190 CDEAIVRKLVNAKRPDIAE-RFERFLLESYIEDNDTVKWCPSTPHCGNAIRVKGDIHCEV 248
CD ++ ++N+ D + ++ RF+L SYI N+ +KWCP+ P C A+ GD + +V
Sbjct: 112 CDAIVLEDMINSLTKDEDKVKYARFVLWSYIGVNNKIKWCPA-PDCTCAVEFLGDGNYDV 170
Query: 249 ECTCGRQFCFNCSSEAHSPCSCVMWELWIKKCRDESETVNWITVNTKPCPKCHKPVEKNG 308
C C FC+NC+ EAH P SC WI K ESE +NWI +KPCPKC +P+EKN
Sbjct: 171 SCKCKFSFCWNCAEEAHRPVSCDTVSKWILKNSAESENMNWILAYSKPCPKCKRPIEKNQ 230
Query: 309 GCNLVACI--CGQAFCWLCGGATGRDHTWSSISGHSCGRFT--------EDQSKKTEQAR 358
GC + C C FCWLC GA DH + ++C R+ ++ + E+A+
Sbjct: 231 GCMHMTCTPPCKFEFCWLCLGAWS-DHGDGTGGFYACNRYQSAKMGGMYDEAEARRERAK 289
Query: 359 RNLYRYMHYHNRYKAHTDSLKQEAKLKGDIQGKISISENKD-SKIKD--------YSWVI 409
+L RYMHY+ R+ ++ S +Q+A Q + EN+D +K+ D ++
Sbjct: 290 NSLERYMHYYERWASNQTS-RQKA------QADLQKVENEDLTKLSDVVGIPETQLKFIP 342
Query: 410 NGLNRLFRSRRVLSYSYPFAFYMFGDEIFKDEMTSDERELKQNLFEDQQQQLEFNVERLS 469
+++ RRVL ++Y + +Y+ + K + F Q + E +ERL
Sbjct: 343 EAWSQIIECRRVLKWTYAYGYYL-------------HNKAKSDFFVYLQGEAESGLERLH 389
Query: 470 GFLERDFQNF 479
E+D + F
Sbjct: 390 KCAEKDMREF 399
>Os04g0492100 Similar to ARIADNE-like protein
Length = 464
Score = 209 bits (532), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 134/425 (31%), Positives = 212/425 (49%), Gaps = 52/425 (12%)
Query: 130 PSSTEVTCNVCYDDVPLSDASKMDCGHNYCNECWTGYFIVKINEGQSRRIKCMALKC-NT 188
P+ E+TC +C+++ P + S CGH +C+ CW GY IN+G C+ L+C +
Sbjct: 2 PNDRELTCGICFENCPRTSMSAAACGHPFCSACWRGYISTSINDGPG----CLMLRCPDP 57
Query: 189 ICDEAIVRKLVNAKRPD-IAERFERFLLESYIEDNDTVKWCPSTPHCGNAIR-VKGDIHC 246
C A+ + ++N+ D E++ R+L SYIEDN KWCP+ P C A+ V G
Sbjct: 58 SCTAAVGQDMINSLADDEDREKYGRYLRRSYIEDNRKTKWCPA-PGCEYAVEFVMGSGSY 116
Query: 247 EVECTCGRQFCFNCSSEAHSPCSCVMWELWIKKCRDESETVNWITVNTKPCPKCHKPVEK 306
+V C C FC+NC+ EAH P C WI K ESE +NWI N+KPCPKC +P+EK
Sbjct: 117 DVNCNCSYGFCWNCTEEAHRPVDCATVSKWILKNSAESENMNWILANSKPCPKCKRPIEK 176
Query: 307 NGGCNLVACI--CGQAFCWLCGGATGRDHTWSSISGHSCGRFT--------EDQSKKTEQ 356
N GC + C C FCWLC G +H + ++C R+ ++ ++ E
Sbjct: 177 NQGCMHITCTPPCKFEFCWLCLGPWS-EHGERTGGFYACNRYEAARQEGAYDESERRREM 235
Query: 357 ARRNLYRYMHYHNRYKAHTDSLKQEA-----KLKGDIQGKIS-ISENKDSKIKDYSWVIN 410
A+ +L RY HY+ R+ A+ S +Q+A L+ D K+S I +S++K ++I
Sbjct: 236 AKNSLERYTHYYERWAANQSS-RQKALGDLLSLQNDKLEKLSDIQSQPESQLK---FIIE 291
Query: 411 GLNRLFRSRRVLSYSYPFAFYMFGDEIFKDEMTSDERELKQNLFEDQQQQLEFNVERLSG 470
++ RRVL ++Y + FY+ + K+ FE Q + E +ERL
Sbjct: 292 AWLQIVECRRVLKWTYAYGFYL-----------PEHEHAKRQFFEYLQGEAESGLERLHQ 340
Query: 471 FLERDFQNFSDDE-----VMDTMKHVINLSNVVDRLCKQMYQCIENDLLYPLRTPHNIAP 525
E++ Q + + E D + L++V + + + +E L +++ P
Sbjct: 341 CAEKELQVYLEAESPSKDFNDFRTKLAGLTSVTRNYFENLVRALETGL-------NDVGP 393
Query: 526 YKSKG 530
S G
Sbjct: 394 STSHG 398
>Os09g0559000 Zinc finger, RING-type domain containing protein
Length = 525
Score = 205 bits (521), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 148/491 (30%), Positives = 235/491 (47%), Gaps = 61/491 (12%)
Query: 59 VITKESLLAAQREDLRKVMELLGLREHHARTLLIHYRWDVERIFE--LLDQKGRDRLFSE 116
V+T++ + A Q ED+ KV E+L L A LL YRW + E LD++ R+
Sbjct: 53 VLTEDDVRARQEEDIAKVCEVLSLSPGAAAVLLRLYRWRAVLLQEEWFLDER---RIRDA 109
Query: 117 AGIPLQPANNPGSPSSTEV-----TCNVCYDDVPLSDASKMDCGHNYCNECWTGYFIVKI 171
AG L PA+ G V TC +C+D C H YC CW GY +
Sbjct: 110 AG--LLPADGGGGEVPARVNRRRLTCAICFDVFDTGGMRSAGCSHFYCVSCWRGYVRAAV 167
Query: 172 NEGQSRRIKCMALKC-NTICDEAIVRKLVNA-KRPDIAERFERFLLESYIEDNDTVKWCP 229
+G +C++L+C + C A+VR+LV+A + ERF F L SY+E++ ++WCP
Sbjct: 168 GDGA----RCLSLRCPDPSCPAAVVRELVDAVADGEDRERFGWFALRSYVEESAGMRWCP 223
Query: 230 STPHCGNAIRV----KGDIHCEVECTCGRQFCFNCSSEAHSPCSCVMWELWIKKCRDESE 285
P C A+ G+ EV C+CG C+ C EAH P SC W++K ESE
Sbjct: 224 G-PGCSRAVEFVGGGDGEESSEVFCSCGHGLCWRCGEEAHRPVSCKTVAKWVEKNSSESE 282
Query: 286 TVNWITVNTKPCPKCHKPVEKNGGCNLVAC--ICGQAFCWLC-----GGATGRDHTWSSI 338
T W+ +TK CPKC P+EKN GC + C C FCW+C G A + +
Sbjct: 283 TATWLLAHTKHCPKCRLPIEKNLGCMHMTCRPPCLHEFCWICLKPWHGHAACSRYQPNGT 342
Query: 339 SGHSCGRFTEDQSKKTEQARRNLYRYMHYHNRYKAHTDSLK-----QEAKLKGDIQGKIS 393
G +D+ ++ QA+ +L RY++++ R+ A+ SL+ E+ + +++ S
Sbjct: 343 VVALAGANADDERRR--QAKASLDRYLYHYERWDANLKSLRVALRDMESLERSELEAMAS 400
Query: 394 ISENKDSKIKDYSWVINGLNRLFRSRRVLSYSYPFAFYMFGDEIFKDEMTSDERELKQNL 453
+ +++ +V ++ RRVL +++ + +Y+ D F K+ L
Sbjct: 401 AAGVPATEM---GFVTEAYEQVGEGRRVLGWAHAYGYYLDPDRDFT----------KRQL 447
Query: 454 FEDQQQQLEFNVERLSGFLERD----FQNFSDDE-VMDTMKH------VINLSNVVDRLC 502
FE Q+ ++ERL G ER+ F +DD+ +D K+ + L+ V +
Sbjct: 448 FEYLQEDANASLERLHGCAERERRELFAAGADDKAAVDFDKYRAYREKLAGLTRVTRQYF 507
Query: 503 KQMYQCIENDL 513
+ + E DL
Sbjct: 508 GNLVKAFETDL 518
>Os09g0559100 Zinc finger, C6HC-type domain containing protein
Length = 579
Score = 174 bits (440), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 129/461 (27%), Positives = 198/461 (42%), Gaps = 68/461 (14%)
Query: 60 ITKESLLAAQREDLRKVMELLGLREHHARTLLIHYRWDVERIFELLDQKGRDRLFSEAGI 119
+++E + A Q D V EL + A LL HY+W + + + L G DR + G+
Sbjct: 74 LSEEQVRARQDADTANVGELFAIPPGFAAVLLRHYKWSLVELQDRLFCDG-DRAGAATGV 132
Query: 120 PLQPANNPGSPSSTEVTCNVCYDDVPLSDASKMDCGHNYCNECWTGYFIVKINEGQSRRI 179
L A P S ++ + C +C+D+ P + C H YC CW GY
Sbjct: 133 ALGGA--PVSRNAHPLVCAICFDEHPAGEMRSAGCSHFYCVGCWRGYVHAAPVVPVPGPS 190
Query: 180 KCMALKCNTICDEAIVRKLVNAKRPDIAERFERFLLESYIEDNDTVKWCPSTPHCGNAIR 239
R A R+ FLL SY+E+ +KWCP P C AI
Sbjct: 191 VL---------------------RRRGAARYATFLLRSYVEEGTRIKWCPG-PGCTLAIE 228
Query: 240 V--------KGDIHCEVECTCGRQFCFNCSSEAHSPCSCVMWELWIKKCRDESETVNWIT 291
K D +VEC G FCF C EAH P SC W +K +SET +W+
Sbjct: 229 FVGGGGGEEKQD---DVECRHGHGFCFRCGEEAHRPVSCETVYAWSEKNAMKSETASWVL 285
Query: 292 VNTKPCPKCHKPVEKNGGCNLVAC--ICGQAFCWLCGGATGRDHTWSSISGHSCGRF--- 346
NTK CPKC P+EKN GC + C C FCWLC + DH S ++C +
Sbjct: 286 ANTKHCPKCRLPIEKNRGCMHMTCRPPCLHEFCWLC-LSPWSDHRSSEY--YNCNVYDAA 342
Query: 347 -----TEDQSKKTEQARRNLYRYMHYHNRYKAHTDSLKQEAKLKGDIQGKISISENKDSK 401
D ++ EQ +L RYMH++ R+ AH K D+ G + +E +
Sbjct: 343 KANGEASDDKRRREQGMASLDRYMHFYERWAAHG---KARQSAVDDMAGLDACAEKLSAA 399
Query: 402 IK----DYSWVINGLNRLFRSRRVLSYSYPFAFYMFGDEIFKDEMTSDERELKQNLFEDQ 457
+ + ++ ++ RR+L ++Y + +Y G + DE ++ + E
Sbjct: 400 VAMPVTELCFLAEAYQQIAECRRLLRWTYAYGYYHLGTGLDGDEE-------RRTMVECA 452
Query: 458 QQQLEFNVERLSGFLERDFQNFSDDEVMDTMKHVINLSNVV 498
Q + E +E+L D +E++ ++ I L+ ++
Sbjct: 453 QGEAERQLEKL-----HDCAEHEREELLAEVERTIKLNAIL 488
>AK110331
Length = 674
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 116/433 (26%), Positives = 190/433 (43%), Gaps = 38/433 (8%)
Query: 56 STSVITKESLLAAQREDLRKVMELLGLREHHARTLLIHYRWDVERIFEL--LDQKGRDRL 113
S ++ K L+ QRE + V L + A LL ++WD E + + D +
Sbjct: 246 SYKILPKHELMPVQREMIEGVASKLSVTISAAGQLLRAHKWDDEALLKAWSADHAAVAKK 305
Query: 114 FSEAGIPLQPANNPGSPSSTEVTCNVCYDDVPLSDASKMDCGHNYCNECWTGYFIVKINE 173
+ I Q + P P +C VC+DDV M CGH +C CW Y ++
Sbjct: 306 ANVTAILRQVMSAPADPEKL-CSCGVCFDDVKEGLTFAMKCGHRFCIPCWKDYLKSSVDS 364
Query: 174 GQSRRIKCMA-----LKCNTICDEAIVRKLVNAKRPDIAERFERFLLESYIEDNDTVKWC 228
G S C++ KC + E I L + +++ L S+++DN+++ WC
Sbjct: 365 GASAGGNCLSSTCPGFKCKELLGEQIYEMLCDEAS---FKKYRDVQLLSFVDDNESITWC 421
Query: 229 PSTPHCGNAIRVKGDIHCEVECTCGRQFCFNCSSEAHSPCSCVMWELWIKKCR-DESETV 287
P CGN I V CTCG++FCF C +EAH+P +C W+ + + ++
Sbjct: 422 PGK-GCGNVIAFSKRKK-TVYCTCGQRFCFKCKAEAHAPTTCKEAADWLARDKGSQNLDS 479
Query: 288 NWITVNTKPCPKCHKPVEKNGGCNLVACI-CGQAFCWLCGGATGRDHTWSSISGHSCGRF 346
++ TKPCP C V+K+GGC ++C C +A+CW CG + H W C R
Sbjct: 480 KFLLEETKPCPHCGVRVKKDGGCMYMSCTQCKKAWCWQCGKSD--HHVW------ECNRP 531
Query: 347 TEDQSKKTEQARRNLYRYMHYHNRYKAHTDSLKQEAKLKGDIQGKISISENKDSKIKDYS 406
+ K + + ++ RY+ Y RY H SLK K + K+ + +
Sbjct: 532 PYEVGKPGD--KDDVNRYLFYFERYFNHGQSLKIADKQRQATMDKMKSLVKEGLHFQRVE 589
Query: 407 WVINGLNRLFRSRRVLSYSYPFAFYMFGDEIFKDEMTSDERELKQNLFEDQQQQLEFNVE 466
+++ + RRVL ++Y A+ + + + LFE +Q +LE E
Sbjct: 590 FLLRATELVLECRRVLKWTYVKAYNF-------------KSKADRTLFEYRQSELEKYTE 636
Query: 467 RLSGFLERDFQNF 479
+L+ E +
Sbjct: 637 KLNQLTEGSLEEL 649
>Os08g0451800 Zinc finger, RING-type domain containing protein
Length = 315
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 96/219 (43%), Gaps = 11/219 (5%)
Query: 127 PGSPSSTEVTCNVCYDDVPLSDASKMD--CGHNYCNECWTGYFIVKINEGQSRRIKCMAL 184
P + ++T V C +C D VP S A + C H +C C GY KI E + ++C
Sbjct: 102 PAAAATTLVFCKICMDAVPPSAAHRASRGCDHAFCAACLAGYVGAKIQE-RIADVRCPEE 160
Query: 185 KCNTICDEAIVRKLVNAKRPDIAERFERFLLESYIEDNDTVKWCPSTPHCGNAIRVKGDI 244
+C D + + ++ ++ +R+ L E+ + +CP + G+
Sbjct: 161 RCRGALDPELCQGILPR---EVFDRWGAALCEAMVLAAPRA-YCPFKDCSAMMLDDAGEA 216
Query: 245 HCEVEC-TCGRQFCFNCSSEAHSPCSCVMWELWIKKCRDESETVNWITVNTKP---CPKC 300
E EC +C R FC C+ H+ C ++ K R + + + K CPKC
Sbjct: 217 VTESECPSCRRLFCAQCAVPWHAGVDCAAYKKLGKGDRGKEDLLVVEMAKGKKWKRCPKC 276
Query: 301 HKPVEKNGGCNLVACICGQAFCWLCGGATGRDHTWSSIS 339
VEK+ GC + C CG FC+ CGG G H S +
Sbjct: 277 KYFVEKSQGCLHITCRCGFEFCYGCGGQWGVTHASCSTA 315
>Os09g0435200
Length = 887
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 84/206 (40%), Gaps = 29/206 (14%)
Query: 137 CNVCYDDVPLSDASK-MDCGHNYCNECWTGYFIVKINEGQSRRIKCMALKCNTICDEAIV 195
C +C+D +P+ D + + C H YC EC T Y K+ EG + + C +C
Sbjct: 440 CGICFDTLPMLDLFRGLPCDHKYCLECMTTYIDGKVREG-AVPVACPDPECAD--GGDGG 496
Query: 196 RKLVNAKRPDIAERFERF------LLESYIEDNDTVKWCPSTPHCGNAIRVKGDIHCEVE 249
+++ + A F F L E + +D +CP+ CG + G+ +
Sbjct: 497 AGVLHPEGCKKAIDFAAFTDWGLRLAEGAVP-HDRRAYCPNR-RCGILLETSGEAEPAMA 554
Query: 250 C--TCGRQFCFNCSSE-------AHSPCSCVMWELWIKKCRDESETVNWITVNTKPCPKC 300
C C C E H CS +KK DE W K CPKC
Sbjct: 555 ACPACQHLLCATCGGEWSTADDADHRDCSKGPEAAMVKKLADERR---W-----KACPKC 606
Query: 301 HKPVEKNGGCNLVACICGQAFCWLCG 326
VE+ GC +++C C FC+LCG
Sbjct: 607 RMLVERTAGCRVMSCRCRMVFCYLCG 632
>Os04g0593700 RWD domain containing protein
Length = 461
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 89/220 (40%), Gaps = 30/220 (13%)
Query: 137 CNVCYDDVPLSDASKMDCGHNYCNECWTGYFIVKINEGQSRRIKCMALKCNTICDEAIVR 196
C +C+ + D K+ CGH +C C Y + + EG ++ C KC I ++++
Sbjct: 237 CMICFTERAGIDFIKLPCGHYFCQRCMETYSRMHVAEGTVLKLLCPNDKCGDIIPPSLLK 296
Query: 197 KLVNAKRPDIAERFERFLLESYIEDNDTVKWCPSTPHCGNAIRVKGDIHCEVECT-CGRQ 255
+++ K ER+ER L+ ++ V +C P C A D +C+ C
Sbjct: 297 RMLGDKD---FERWERLTLQKTLDSMSDVAYC---PRCVTA--CLEDEENNAQCSKCFFS 348
Query: 256 FCFNCSSEAHSPCSCVMWELWIKKCRD--------------------ESETVNWITVNTK 295
FC C H C+ E + +D E ++ + ++
Sbjct: 349 FCTRCRYLRHIGERCISPEEKLLSLQDRNKVRQLSKGNFARRINLANEISSIKEVLRSSV 408
Query: 296 PCPKCHKPVEKNGGCNLVACI-CGQAFCWLCGGATGRDHT 334
CP C + + GC+ + C C Q FC+ CG R H+
Sbjct: 409 LCPHCGTAISRVSGCDHMLCSNCRQPFCYSCGKPLHRGHS 448
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.134 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 21,294,981
Number of extensions: 935399
Number of successful extensions: 2519
Number of sequences better than 1.0e-10: 18
Number of HSP's gapped: 2435
Number of HSP's successfully gapped: 18
Length of query: 612
Length of database: 17,035,801
Length adjustment: 107
Effective length of query: 505
Effective length of database: 11,448,903
Effective search space: 5781696015
Effective search space used: 5781696015
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 159 (65.9 bits)