Os04g0492100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to ARIADNE-like protein.
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Os04g0492100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to ARIADNE-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 16.43 | 0.19 | 12.1 | -0.317 | 1.01 | 0.363 | 0.601 | -1.17 | -0.0197 | 5.8 | 8.358 | 898 | -- | -- |
| 17.51 | 0.195 | 12.1 | -0.0895 | 0.962 | 0.327 | 0.663 | -- | 0.0496 | 5.79 | 13.18 | 1130 | -- | -- |
| 17.05 | 0.192 | 12.1 | -0.344 | 1.05 | 0.349 | -- | -1.54 | -0.0283 | 5.69 | 10.3 | 654 | -- | -- |
| 18.45 | 0.2 | 12.1 | -0.0911 | 0.97 | 0.325 | -- | -- | 0.0359 | 5.65 | 11.75 | 1196 | -- | -- |
| 66.42 | 0.38 | 12.1 | -0.33 | -- | 0.506 | -- | -1 | -0.0158 | -- | 14.8 | 1254 | -- | -- |
| 19.31 | 0.206 | 12.1 | 0.00454 | 0.983 | -- | 0.594 | -- | 0.0959 | 5.6 | -- | -- | -- | -- |
| 20.15 | 0.21 | 12.1 | 0.00662 | 0.986 | -- | -- | -- | 0.0931 | 5.51 | -- | -- | -- | -- |
| 66.71 | 0.38 | 12.1 | -0.111 | -- | 0.488 | -- | -- | 0.0293 | -- | 13.52 | 1278 | -- | -- |
| 18.64 | 0.201 | 12.1 | -- | 0.971 | 0.288 | -- | -- | 0.0505 | 5.65 | 11.32 | 1196 | -- | -- |
| 70.75 | 0.393 | 12.1 | 0.0392 | -- | -- | -- | -- | 0.117 | -- | -- | -- | -- | -- |
| 20.15 | 0.21 | 12.1 | -- | 0.986 | -- | -- | -- | 0.0924 | 5.51 | -- | -- | -- | -- |
| 66.99 | 0.381 | 12.1 | -- | -- | 0.441 | -- | -- | 0.0482 | -- | 13 | 1277 | -- | -- |
| 70.79 | 0.393 | 12.1 | -- | -- | -- | -- | -- | 0.113 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 14.83 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 15 | 14 |
| 2 | 14.86 | temperature | 10.0 | 30 | > th | dose dependent | sin | 12 | NA |
| 7 | 14.96 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 17 | 5 |
| 90 | 15.36 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 10 | 17 |
| 114 | 15.45 | temperature | 15.0 | 270 | > th | dose independent | rect. | 15 | 14 |
| 115 | 15.45 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 15 | 14 |
| 133 | 15.48 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 17 | 13 |
| 155 | 15.52 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 10 | 12 |
| 169 | 15.54 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 17 | 10 |
| 192 | 15.57 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 15 | 15 |
| 245 | 15.63 | temperature | 30.0 | 10 | < th | dose dependent | sin | 12 | NA |
| 320 | 15.75 | temperature | 30.0 | 720 | < th | dose independent | rect. | 16 | 9 |
| 334 | 15.76 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 16 | 12 |
| 348 | 15.78 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 17 | 6 |
| 365 | 15.80 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 19 | 8 |
| 436 | 15.91 | temperature | 15.0 | 720 | > th | dose independent | rect. | 10 | 9 |
| 437 | 15.91 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 17 | 4 |
| 512 | 16.01 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 14 | 14 |
| 585 | 16.08 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 19 | 1 |
| 594 | 16.08 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 15 | 14 |
| 599 | 16.09 | temperature | 30.0 | 720 | < th | dose independent | sin | 13 | NA |
| 605 | 16.10 | temperature | 20.0 | 10 | > th | dose independent | rect. | 15 | 15 |
| 635 | 16.12 | humidity | 50.0 | 270 | > th | dose independent | rect. | 5 | 10 |
| 637 | 16.12 | temperature | 15.0 | 720 | > th | dose independent | rect. | 7 | 15 |
| 638 | 16.12 | temperature | 30.0 | 720 | < th | dose independent | rect. | 15 | 16 |
| 669 | 16.15 | temperature | 30.0 | 720 | < th | dose independent | rect. | 16 | 3 |
| 671 | 16.15 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 17 | 13 |
| 753 | 16.21 | temperature | 20.0 | 10 | > th | dose independent | rect. | 17 | 13 |
| 784 | 16.23 | atmosphere | 1010.0 | 720 | < th | dose independent | rect. | 17 | 5 |
| 786 | 16.23 | humidity | 70.0 | 720 | > th | dose independent | rect. | 19 | 8 |
| 815 | 16.25 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 15 | 14 |
| 832 | 16.25 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 15 | 14 |
| 836 | 16.26 | temperature | 25.0 | 720 | < th | dose independent | rect. | 19 | 1 |
| 845 | 16.26 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 17 | 14 |
| 878 | 16.28 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 15 | 15 |
| 962 | 16.32 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 11 | 17 |
| 997 | 16.34 | temperature | 30.0 | 720 | < th | dose independent | rect. | 16 | 1 |