BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0542600 Os09g0542600|AK060109
(217 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os09g0542600 Similar to RING-H2 finger protein ATL1I 441 e-124
Os08g0550400 Similar to RING-H2 finger protein ATL5P 152 2e-37
Os06g0717600 Zinc finger, RING-type domain containing protein 143 1e-34
Os10g0544600 Fibrillarin family protein 125 2e-29
Os07g0479100 Zinc finger, RING-type domain containing protein 102 2e-22
Os06g0231600 Zinc finger, RING-type domain containing protein 97 9e-21
Os02g0743700 Similar to RING-H2 finger protein ATL1Q 88 5e-18
Os02g0820200 Zinc finger, RING-type domain containing protein 75 4e-14
Os02g0832150 Zinc finger, RING-type domain containing protein 71 6e-13
Os06g0666500 Zinc finger, RING-type domain containing protein 70 1e-12
Os02g0767600 69 3e-12
AK064102 67 7e-12
Os03g0391100 67 9e-12
Os02g0248280 67 1e-11
Os06g0540400 Zinc finger, RING-type domain containing protein 67 1e-11
Os02g0247900 66 2e-11
Os02g0248900 66 2e-11
Os06g0535200 Zinc finger, RING-type domain containing protein 65 3e-11
Os06g0155200 65 3e-11
Os06g0534900 Zinc finger, RING-type domain containing protein 65 3e-11
Os02g0541500 65 4e-11
Os06g0535900 65 4e-11
Os06g0537300 65 5e-11
Os06g0539800 65 5e-11
Os02g0248200 64 6e-11
Os11g0610600 Similar to RING-H2 finger protein ATL2N 64 6e-11
Os02g0249200 64 9e-11
Os04g0450400 Zinc finger, RING-type domain containing protein 64 1e-10
>Os09g0542600 Similar to RING-H2 finger protein ATL1I
Length = 217
Score = 441 bits (1134), Expect = e-124, Method: Compositional matrix adjust.
Identities = 217/217 (100%), Positives = 217/217 (100%)
Query: 1 MLSLATRLRRVAGKLARCLATCVFATGVQAGMMLGAIAGVIAGFVSEDGLLQGTLIGAIS 60
MLSLATRLRRVAGKLARCLATCVFATGVQAGMMLGAIAGVIAGFVSEDGLLQGTLIGAIS
Sbjct: 1 MLSLATRLRRVAGKLARCLATCVFATGVQAGMMLGAIAGVIAGFVSEDGLLQGTLIGAIS 60
Query: 61 GAFIAMEVVDSLAKIWCYEEYSIATRAHLMLLVFWNLVIDRLTVRTSVFPTLTTVLDSQL 120
GAFIAMEVVDSLAKIWCYEEYSIATRAHLMLLVFWNLVIDRLTVRTSVFPTLTTVLDSQL
Sbjct: 61 GAFIAMEVVDSLAKIWCYEEYSIATRAHLMLLVFWNLVIDRLTVRTSVFPTLTTVLDSQL 120
Query: 121 NAVPSRHRRAEVSGDLTGRSYPVVMGMRLAAVDQLPVIKLTAAQTDATGACPICLHDFKA 180
NAVPSRHRRAEVSGDLTGRSYPVVMGMRLAAVDQLPVIKLTAAQTDATGACPICLHDFKA
Sbjct: 121 NAVPSRHRRAEVSGDLTGRSYPVVMGMRLAAVDQLPVIKLTAAQTDATGACPICLHDFKA 180
Query: 181 GEIARRLPACCHIFHLGCIDNWLLWHALCPMCRRPVN 217
GEIARRLPACCHIFHLGCIDNWLLWHALCPMCRRPVN
Sbjct: 181 GEIARRLPACCHIFHLGCIDNWLLWHALCPMCRRPVN 217
>Os08g0550400 Similar to RING-H2 finger protein ATL5P
Length = 260
Score = 152 bits (384), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/211 (45%), Positives = 123/211 (58%), Gaps = 11/211 (5%)
Query: 10 RVAGKLARCLATCVFATGVQAGMMLGAIAGVIAGFVSEDGLLQGTLIGAISGAFIAMEVV 69
RVAG +AR + T VFAT G +LGAI G + G +E G+++GT IGAISGA +AMEVV
Sbjct: 40 RVAGAVARGIVTFVFAT---VGTILGAITGGLIGLATESGMVRGTGIGAISGAVVAMEVV 96
Query: 70 DSLAKIWCYEEYSIATRAHLMLLVFWNLVIDRLTVRTSVFPTLTTVLDSQLNAVPSRHRR 129
DS +WC + I + ++ L V W+L+ RL VR V P + +DSQ+NA + R
Sbjct: 97 DSSVAMWCSHDSGIWSVLYV-LDVIWSLLTGRL-VREKVDPAVQNAVDSQMNAADAPFRE 154
Query: 130 -AEVSGDLTGRSYPVV----MGMRLAAVDQLPVIKLTAAQTDATGA-CPICLHDFKAGEI 183
A ++ P V GM A+ LPV AA A C +CL D + GE
Sbjct: 155 SAPTLAEMFDTGIPGVAAAATGMPADAIAALPVTTFAAAAGGDDRAGCSVCLQDLEDGER 214
Query: 184 ARRLPACCHIFHLGCIDNWLLWHALCPMCRR 214
ARRLP C H FHL CID+WLL HA CP+CRR
Sbjct: 215 ARRLPECGHTFHLRCIDSWLLRHASCPLCRR 245
>Os06g0717600 Zinc finger, RING-type domain containing protein
Length = 232
Score = 143 bits (360), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/210 (40%), Positives = 125/210 (59%), Gaps = 13/210 (6%)
Query: 9 RRVAGKLARCLATCVFATGVQAGMMLGAIAGVIAGFVSEDGLLQGTLIGAISGAFIAMEV 68
RR+ ++ R + T +FA AG+ LGA+ G + G +E GL +GT IGAI+GA +++EV
Sbjct: 30 RRMMHRVFRGVITFIFAI---AGLFLGAVTGGLIGLATESGLFRGTGIGAITGALVSIEV 86
Query: 69 VDSLAKIWCYEEYSIATRAHLMLLVFWNLVIDRLTVRTSVFPTLTTVLDSQLNAVPSRHR 128
VDS ++W I++ ++ L V ++L+ RL VR V P + V+ SQ+NAV S
Sbjct: 87 VDSSIRVWRSRRSGISSICYV-LNVIYSLLTGRL-VREKVDPAVQRVVRSQMNAVDSSPF 144
Query: 129 RAEVSGDLTGRSYPVVMGMRLAAVDQLPVIKLTAA-QTDATG---ACPICLHDFKAGEIA 184
R S DL GM A++D+LP +++T + +A G C +CL DF+ GE
Sbjct: 145 RE--SPDLF--EIEGTNGMPRASIDKLPEVRITEEYRRNAIGDLSGCSVCLQDFQTGEKV 200
Query: 185 RRLPACCHIFHLGCIDNWLLWHALCPMCRR 214
R LP C H+FH+ CID WL+ H CP+CRR
Sbjct: 201 RSLPDCWHVFHVPCIDGWLIKHGSCPLCRR 230
>Os10g0544600 Fibrillarin family protein
Length = 233
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/204 (39%), Positives = 120/204 (58%), Gaps = 18/204 (8%)
Query: 19 LATCVFATGVQAGMMLGAIAGVIAGFVSEDGLLQGTLIGAISGAFIAMEVVDSLAKIWCY 78
+ATCVFA G ++GA+ G G +E G+L+G IGAISGA ++EV +S +W
Sbjct: 42 VATCVFAA---VGSVVGAVTGSAIGLATESGMLRGAGIGAISGAVFSIEVAESSRDLWHS 98
Query: 79 EEYSIATRAHLMLLVFWNLVIDRLTVRTSVFPTLTTVLDSQLNAVPSRHRRAEVSGDL-- 136
+ ++ + M+ + +L+ RL VR V P + + + SQ++A+ S AE S DL
Sbjct: 99 SDSAVWCLVY-MVDIISSLLSGRL-VREKVGPAVQSAVQSQISAISSPF--AETS-DLFE 153
Query: 137 TGRSYPVVMGMRLAAVDQLPVIKLTAAQT-DATGA---CPICLHDFKAGEIARRLPACCH 192
TG + G+ + +LP IK+T D+ G C +CL DF+ GE+ARRLP+C H
Sbjct: 154 TGGTK----GLPADTLRRLPAIKITGDNAVDSAGEPICCSVCLQDFRVGEMARRLPSCRH 209
Query: 193 IFHLGCIDNWLLWHALCPMCRRPV 216
+FH+ CID WL+ H CP+CRR +
Sbjct: 210 VFHVPCIDCWLVRHGSCPLCRRDI 233
>Os07g0479100 Zinc finger, RING-type domain containing protein
Length = 249
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 99/207 (47%), Gaps = 23/207 (11%)
Query: 19 LATCVFATGVQAGMMLGAIAGVIAGFVSEDGLLQGTLIGAISGAFIAMEVVDSLAKIWCY 78
L TCVFA G ++G G G +E G+L+G +G +SGA ++E V+S +IW
Sbjct: 52 LLTCVFAV---VGSLVGVFIGAFMGMSTESGMLRGAGVGVVSGAVFSIEAVESCIEIWRS 108
Query: 79 EE---YSIATRAHLMLLVFWNLVIDRLTVRTSVFPTLTTVLDSQLN--AVPSRHRRAEVS 133
E YSI +L + +L R+ V V P L + SQ++ + P
Sbjct: 109 SESGKYSII----FVLDIISSLFSGRI-VWEKVSPALQRAVQSQMSLLSTPFIDNNDLFE 163
Query: 134 GDLTGRSYPVVMGMRLAAVDQLPVIKLTAA---QTDATGACPICLHDFKAGEIARRLPAC 190
TG GM ++++P +AA + C +CL DF A + R LP C
Sbjct: 164 TGNTG-------GMSRDLINRIPKTTFSAATNPDQETDNCCAVCLQDFGASQFVRVLPHC 216
Query: 191 CHIFHLGCIDNWLLWHALCPMCRRPVN 217
H FH CIDNWL HA CP+CR V+
Sbjct: 217 QHTFHARCIDNWLFRHASCPLCRAGVH 243
>Os06g0231600 Zinc finger, RING-type domain containing protein
Length = 222
Score = 97.1 bits (240), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 104/220 (47%), Gaps = 32/220 (14%)
Query: 5 ATRLRRVAGKLARCLATCVFATGVQAGMMLGAIAGVIAGFVSEDGLLQGTLIGAISGAFI 64
ATRL R+ + + T +FA AG + GA+ G +AG S+ G+L+G +G +GA +
Sbjct: 21 ATRLPRLLRGVVSGMLTGIFAV---AGGLTGAVTGALAGRASDGGVLRGAGLGTFAGAVL 77
Query: 65 AMEVVDSLAKIWCYEEYS----------IATRAHLMLLVFWNLVIDRLTVRTSVFPTLTT 114
++E++++ WC + S + H + N +T R V +
Sbjct: 78 SIEILEASRAYWCQDRSSSPGSLSMGDFVKQLIHARFVQEQNEASGHITYRWQV--GIAD 135
Query: 115 VLDSQLNAVPSRHRRAEVSGDLTGRSYPVVMGMRLAAVDQLP---VIKLTAAQTDATGAC 171
V++ ++ E+ GD+ P G+ ++ +LP VI + +C
Sbjct: 136 VVNGAVH---------EILGDV-----PSGEGLSKYSLMKLPYHVVIDHNNGSIGESLSC 181
Query: 172 PICLHDFKAGEIARRLPACCHIFHLGCIDNWLLWHALCPM 211
P+CL D AG+ RRLP C H FH C+D WL+ H CPM
Sbjct: 182 PVCLQDVVAGQTVRRLPKCSHTFHQPCVDKWLVGHGSCPM 221
>Os02g0743700 Similar to RING-H2 finger protein ATL1Q
Length = 220
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 99/191 (51%), Gaps = 12/191 (6%)
Query: 30 AGMMLGAIAGVIAGFVSEDGLLQGTLIGAISGAFIAMEVVDSLAKIWCYEEYSIATRAHL 89
AG + GA+ G +AG S+ G+L+G +GA +GA +++EV+++ WC + + +
Sbjct: 38 AGALTGAVTGALAGRASDSGVLRGAGLGAFAGAVLSIEVLEASRAYWCSDR--LGSHGTS 95
Query: 90 MLLVFWNLVIDRLTVRTSVFPTLTTVLDSQLNAVPSRHRR-AEVSGDLTGRSYPVVMGMR 148
+ F ++ V+ + P+ Q++ H ++ GD + + G+
Sbjct: 96 SMADFIEQLLQARFVQEQIVPSGYATHRWQVSISDFGHDDLYDIFGDCSSK------GLS 149
Query: 149 LAAVDQLPVIKLTAAQTDATG---ACPICLHDFKAGEIARRLPACCHIFHLGCIDNWLLW 205
++++LP +T ++ G +C ICL D GE ARRLP C H FH C+D WL+
Sbjct: 150 RESLNKLPHYVVTDQTRNSFGEDLSCTICLQDIVTGETARRLPNCSHTFHQPCVDKWLVG 209
Query: 206 HALCPMCRRPV 216
H CP+CR+ V
Sbjct: 210 HGSCPVCRQCV 220
>Os02g0820200 Zinc finger, RING-type domain containing protein
Length = 320
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 53/100 (53%), Gaps = 5/100 (5%)
Query: 117 DSQLNAVPSRHRRAEVSGDLTGRSYPVVMGMRLAAVDQLPVIKLTAAQTDAT---GACPI 173
D++ + SR RR S L + P G+ AA+ LP + A D T C +
Sbjct: 87 DTRTAGLISRRRRGAASSSLPAVAEP--RGLEEAAIQSLPAFRYRKAIKDTTADSSECAV 144
Query: 174 CLHDFKAGEIARRLPACCHIFHLGCIDNWLLWHALCPMCR 213
C+ +F+ E R LP+C H+FH+ CID WL +A CP+CR
Sbjct: 145 CISEFQEEERVRLLPSCLHVFHVDCIDTWLQGNANCPLCR 184
>Os02g0832150 Zinc finger, RING-type domain containing protein
Length = 217
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 37/68 (54%)
Query: 146 GMRLAAVDQLPVIKLTAAQTDATGACPICLHDFKAGEIARRLPACCHIFHLGCIDNWLLW 205
G++ A+D LP + Q C ICL +F GE R LP C H FH+ CID WL
Sbjct: 107 GLKKKAIDALPTVSFALKQQQQQAECAICLAEFAGGEELRLLPHCGHAFHVSCIDTWLGT 166
Query: 206 HALCPMCR 213
HA CP CR
Sbjct: 167 HATCPSCR 174
>Os06g0666500 Zinc finger, RING-type domain containing protein
Length = 181
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 39/69 (56%)
Query: 146 GMRLAAVDQLPVIKLTAAQTDATGACPICLHDFKAGEIARRLPACCHIFHLGCIDNWLLW 205
G++ V LPV A+ + C ICL DF GE R LPAC H FH+ CID WLL
Sbjct: 86 GLKREDVVALPVATYVASPAPSVAGCAICLSDFADGERVRLLPACGHRFHVVCIDRWLLA 145
Query: 206 HALCPMCRR 214
H CP CRR
Sbjct: 146 HCSCPTCRR 154
>Os02g0767600
Length = 335
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 135 DLTGRSYPVVMGMRLAAVDQLPVIKLTAAQTDATGACPICLHDFKAGEIARRLPACCHIF 194
+LT P +A+D LP +++T A CP+C DF+ GE AR++P C H++
Sbjct: 163 ELTQNDRPGPAPAPSSAIDSLPTVQITGAHLSDGSQCPVCKEDFELGEAARQMP-CKHVY 221
Query: 195 HLGCIDNWLLWHALCPMCR 213
H CI WL H CP+CR
Sbjct: 222 HSDCIVPWLRLHNSCPVCR 240
>AK064102
Length = 357
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Query: 147 MRLAAVDQLPVIKLTAAQTDAT----GACPICLHDFKAGEIARRLPACCHIFHLGCIDNW 202
+R +D+ + + A+ A G C +CL +F+ GE+ R LP C H FH CID W
Sbjct: 129 IRTVGLDEATITSIATAEYRAGVGWGGDCAVCLGEFRDGELVRLLPRCSHPFHAPCIDTW 188
Query: 203 LLWHALCPMCRRPV 216
L H CP+CR PV
Sbjct: 189 LRAHVNCPLCRSPV 202
>Os03g0391100
Length = 417
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 146 GMRLAAVDQLPVIKLTAAQTDATG----ACPICLHDF-KAGEIARRLPACCHIFHLGCID 200
G+ +AA++ LPV+ A+ G C +CL +F GE R LP CCH+FH CID
Sbjct: 123 GLDVAAMEALPVLTYATARAVKAGRGALECAVCLAEFADGGEKLRLLPGCCHVFHAACID 182
Query: 201 NWLLWHALCPMCR 213
WL H CP+CR
Sbjct: 183 VWLAAHVTCPVCR 195
>Os02g0248280
Length = 189
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 44/78 (56%), Gaps = 10/78 (12%)
Query: 146 GMRLAAVDQLPVIKLTAAQTDATGA----------CPICLHDFKAGEIARRLPACCHIFH 195
G+ AA+D LP D G C +CL D +AGE+ R+LPAC H+FH
Sbjct: 76 GLVGAAIDALPAFAYARPAADDGGGGGSKSGRCALCSVCLEDVQAGEMVRQLPACRHLFH 135
Query: 196 LGCIDNWLLWHALCPMCR 213
+GCID WL H+ CP+CR
Sbjct: 136 VGCIDMWLHSHSTCPLCR 153
>Os06g0540400 Zinc finger, RING-type domain containing protein
Length = 168
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 154 QLPVIKLTAAQTDATGA--CPICLHDFKAGEIARRLPACCHIFHLGCIDNWLLWHALCPM 211
++P T + + GA C +CL + GE+ RRLPAC H++H+ CID WL HA CP+
Sbjct: 85 KIPEFAYTGSASGGEGAAQCSVCLGAVRGGEMVRRLPACKHLYHVECIDMWLASHATCPL 144
Query: 212 CRRPVN 217
CR V
Sbjct: 145 CRTEVE 150
>Os02g0247900
Length = 209
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 33/47 (70%)
Query: 171 CPICLHDFKAGEIARRLPACCHIFHLGCIDNWLLWHALCPMCRRPVN 217
C +CL + + GE A+RLP C H+FH CID WL HA CP+CR PV+
Sbjct: 144 CSVCLGEMRQGEAAKRLPVCLHVFHEECIDMWLGSHATCPICRSPVD 190
>Os02g0248900
Length = 195
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 138 GRSYPVVMGMRLAAVDQLPVIKLTAAQTDA-TGACPICLHDFKAGEIARRLPACCHIFHL 196
G P G+ AA+D LP + + AC +CL D + GE R LPAC H++H
Sbjct: 87 GAPTPAECGLTAAAIDALPASEYERPRGGGGDPACSVCLEDVRGGETVRWLPACGHLYHA 146
Query: 197 GCIDNWLLWHALCPMCR 213
CID WL CP+CR
Sbjct: 147 ACIDAWLRSRTTCPLCR 163
>Os06g0535200 Zinc finger, RING-type domain containing protein
Length = 223
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 31/45 (68%)
Query: 173 ICLHDFKAGEIARRLPACCHIFHLGCIDNWLLWHALCPMCRRPVN 217
+CL + GE ARRLP+C H FH+ CID WL HA CP+CRR V
Sbjct: 158 VCLEALRGGETARRLPSCAHTFHVACIDMWLGSHATCPVCRRRVE 202
>Os06g0155200
Length = 221
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 35/58 (60%)
Query: 159 KLTAAQTDATGACPICLHDFKAGEIARRLPACCHIFHLGCIDNWLLWHALCPMCRRPV 216
+ TAA C ICL + GE RRLP+C H+FH GC+D WL HA CP+CR V
Sbjct: 153 EQTAAAAGGWAQCSICLGLARVGEAVRRLPSCGHLFHAGCVDEWLRAHATCPLCRAAV 210
>Os06g0534900 Zinc finger, RING-type domain containing protein
Length = 412
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 39/80 (48%), Gaps = 11/80 (13%)
Query: 146 GMRLAAVDQLPVIKLTAAQTDATGA-----------CPICLHDFKAGEIARRLPACCHIF 194
G+ A+D LP D C +CL D AGE RRLP+C H+F
Sbjct: 112 GLAAQAIDALPAFAYEPPAADVEDGGEGKPRGGGALCAVCLEDVVAGETVRRLPSCGHLF 171
Query: 195 HLGCIDNWLLWHALCPMCRR 214
H+ CID WL H CP+CRR
Sbjct: 172 HVDCIDMWLHAHRTCPLCRR 191
>Os02g0541500
Length = 202
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 133 SGDLTGRSYPVVMGMRLAAVDQLPVIKLTAAQTDATGACPICLHDFKAGEIARRLPACCH 192
G+L + G+R A+ +P + +AA + AC ICL D + GE R LP C H
Sbjct: 96 DGELGPSAAAQAAGVRRKALRAMPTMVYSAAGGPSP-ACAICLADLEPGERVRVLPKCNH 154
Query: 193 IFHLGCIDNWLLWHALCPMCRRPV 216
FH+ C+D WLL + CP CR+P+
Sbjct: 155 GFHVRCVDRWLLARSTCPTCRQPL 178
>Os06g0535900
Length = 192
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 49/98 (50%), Gaps = 14/98 (14%)
Query: 128 RRAEVSGDLTG---RSYPVVMGMRLAAVDQLPVI----KLTAAQTDATGACPICLHDFKA 180
R A GDL G S PV + V LP K D G C ICL + +
Sbjct: 85 REAPAEGDLRGLGASSSPVFV------VAVLPAYAWRKKAAVDGDDGDGECAICLGEVRR 138
Query: 181 GEIARRLPACCHIFHLGCIDNWLL-WHALCPMCRRPVN 217
G++ ++LPAC H+FH CID WL+ CP+CR PV+
Sbjct: 139 GQVVKQLPACTHLFHARCIDKWLITSQGTCPVCRTPVD 176
>Os06g0537300
Length = 174
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 35/56 (62%)
Query: 162 AAQTDATGACPICLHDFKAGEIARRLPACCHIFHLGCIDNWLLWHALCPMCRRPVN 217
+A+ G C +CL + GE RRLPAC H++H+ CID WL HA CP+CR V
Sbjct: 93 SARHGGGGECSVCLGAVQGGEAVRRLPACKHLYHVECIDMWLASHATCPICRTEVE 148
>Os06g0539800
Length = 167
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 35/56 (62%)
Query: 162 AAQTDATGACPICLHDFKAGEIARRLPACCHIFHLGCIDNWLLWHALCPMCRRPVN 217
+A+ G C +CL + GE RRLPAC H++H+ CID WL HA CP+CR V
Sbjct: 86 SARHGGGGECSVCLGAVQGGEAVRRLPACKHLYHVECIDMWLASHATCPLCRTEVE 141
>Os02g0248200
Length = 211
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 45/84 (53%), Gaps = 8/84 (9%)
Query: 139 RSYPVVMG---MRLAAVDQLPVIK-----LTAAQTDATGACPICLHDFKAGEIARRLPAC 190
R P V G R+A D +P + A C +CL + + GE+A+RLPAC
Sbjct: 113 RETPTVRGGGGARVATADDIPAYEQPPAGEGEGGAAAAPECAVCLGEVEKGEMAKRLPAC 172
Query: 191 CHIFHLGCIDNWLLWHALCPMCRR 214
H+FH CID WL ++ CP+CRR
Sbjct: 173 LHVFHQRCIDAWLRGNSTCPVCRR 196
>Os11g0610600 Similar to RING-H2 finger protein ATL2N
Length = 405
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 31/48 (64%)
Query: 170 ACPICLHDFKAGEIARRLPACCHIFHLGCIDNWLLWHALCPMCRRPVN 217
+C +CL +F+ GE R LP C H FH GCID WL H CP+CR PV
Sbjct: 221 SCAVCLTEFRDGETLRLLPRCRHAFHRGCIDTWLRAHVNCPLCRAPVQ 268
>Os02g0249200
Length = 166
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 38/69 (55%)
Query: 149 LAAVDQLPVIKLTAAQTDATGACPICLHDFKAGEIARRLPACCHIFHLGCIDNWLLWHAL 208
LAA+ + + A C ICL + GE RRLP C H+FH+ C+D WL HA
Sbjct: 88 LAAIPKFAYRRGAAGGGGGWAQCAICLGVVRDGEAVRRLPECKHLFHVECVDMWLYSHAT 147
Query: 209 CPMCRRPVN 217
CP+CRR V
Sbjct: 148 CPLCRRDVG 156
>Os04g0450400 Zinc finger, RING-type domain containing protein
Length = 415
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 141 YPVVMGMRLAAVDQLPVIKLTA-AQTDATGACPICLHDFKAGEIARRLPACCHIFHLGCI 199
Y +G+ AA+D + + A A C +CL +F+ GE+ R LP C H FH+ CI
Sbjct: 171 YIRTVGLDEAAIDSIAATRYRAGAGLLGAADCSVCLGEFQDGELVRLLPKCGHAFHVPCI 230
Query: 200 DNWLLWHALCPMCRRPV 216
D WL H CP+CR V
Sbjct: 231 DTWLRAHVNCPLCRSDV 247
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.329 0.139 0.442
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 6,694,780
Number of extensions: 244805
Number of successful extensions: 1262
Number of sequences better than 1.0e-10: 46
Number of HSP's gapped: 1272
Number of HSP's successfully gapped: 47
Length of query: 217
Length of database: 17,035,801
Length adjustment: 97
Effective length of query: 120
Effective length of database: 11,971,043
Effective search space: 1436525160
Effective search space used: 1436525160
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 154 (63.9 bits)